RNA–Protein interactions for RNA: ENST00000505625.5

MATR3-211, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 7,306 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-211ENST00000505625 PRDM5Q9NQX1 630 aaPredicted RBP6.08□□□□□ -1.44
MATR3-211ENST00000505625 TAF3Q5VWG9 929 aa6.08□□□□□ -1.44
MATR3-211ENST00000505625 BMP2KQ9NSY1 1161 aaPredicted RBP6.08□□□□□ -1.44
MATR3-211ENST00000505625 SLF2Q8IX21 1173 aa6.08□□□□□ -1.44
MATR3-211ENST00000505625 KCNG4Q8TDN1 519 aa6.08□□□□□ -1.44
MATR3-211ENST00000505625 MPHOSPH9Q99550 1183 aa6.08□□□□□ -1.44
MATR3-211ENST00000505625 KIF9Q9HAQ2 790 aa6.08□□□□□ -1.44
MATR3-211ENST00000505625 FHAD1B1AJZ9 1412 aa6.08□□□□□ -1.44
MATR3-211ENST00000505625 NCKAP5LQ9HCH0 1330 aa6.08□□□□□ -1.44
MATR3-211ENST00000505625 TRIM5Q9C035 493 aa6.08□□□□□ -1.44
MATR3-211ENST00000505625 GOPCQ9HD26 462 aa6.08□□□□□ -1.44
MATR3-211ENST00000505625 MSH6P52701 1360 aa6.08□□□□□ -1.44
MATR3-211ENST00000505625 CDR1P51861 262 aa6.08□□□□□ -1.44
MATR3-211ENST00000505625 RNF34Q969K3 372 aa6.08□□□□□ -1.44
MATR3-211ENST00000505625 SPATA17Q96L03 361 aa6.08□□□□□ -1.44
MATR3-211ENST00000505625 CDK19Q9BWU1 502 aa6.08□□□□□ -1.44
MATR3-211ENST00000505625 MIS18AQ9NYP9 233 aa6.08□□□□□ -1.44
MATR3-211ENST00000505625 ERLIN2O94905 339 aa6.07□□□□□ -1.44
MATR3-211ENST00000505625 BCCIPQ9P287 314 aaKnown RBP eCLIP6.07□□□□□ -1.44
MATR3-211ENST00000505625 GOLGA6CA6NDK9 693 aa6.07□□□□□ -1.44
MATR3-211ENST00000505625 GOLGA6BA6NDN3 693 aa6.07□□□□□ -1.44
MATR3-211ENST00000505625 SURF6O75683 361 aaKnown RBP6.07□□□□□ -1.44
MATR3-211ENST00000505625 GOLGA6DP0CG33 693 aa6.07□□□□□ -1.44
MATR3-211ENST00000505625 EZRP15311 586 aaKnown RBP6.07□□□□□ -1.44
MATR3-211ENST00000505625 CCDC144CPQ8IYA2 1237 aa6.07□□□□□ -1.44
MATR3-211ENST00000505625 FNBP4Q8N3X1 1017 aaPredicted RBP6.07□□□□□ -1.44
MATR3-211ENST00000505625 GANCQ8TET4 914 aa6.07□□□□□ -1.44
MATR3-211ENST00000505625 TRIM6Q9C030 488 aaPredicted RBP6.07□□□□□ -1.44
MATR3-211ENST00000505625 ZNF287Q9HBT7 754 aa6.07□□□□□ -1.44
MATR3-211ENST00000505625 GOLGA6AQ9NYA3 693 aa6.07□□□□□ -1.44
MATR3-211ENST00000505625 PHACTR2O75167 634 aa6.07□□□□□ -1.44
MATR3-211ENST00000505625 PDIA4P13667 645 aaKnown RBP6.07□□□□□ -1.44
MATR3-211ENST00000505625 FAM98CQ17RN3 349 aaKnown RBP6.07□□□□□ -1.44
MATR3-211ENST00000505625 APBB1IPQ7Z5R6 666 aaPredicted RBP6.07□□□□□ -1.44
MATR3-211ENST00000505625 ZNF467Q7Z7K2 595 aaPredicted RBP6.07□□□□□ -1.44
MATR3-211ENST00000505625 C1orf115Q9H7X2 142 aa6.07□□□□□ -1.44
MATR3-211ENST00000505625 RCAN3Q9UKA8 241 aa6.07□□□□□ -1.44
MATR3-211ENST00000505625 ODF2LQ9ULJ1 636 aa6.07□□□□□ -1.44
MATR3-211ENST00000505625 RBM25P49756 843 aaKnown RBP6.07□□□□□ -1.44
MATR3-211ENST00000505625 IFRD2Q12894 506 aaPredicted RBP6.07□□□□□ -1.44
MATR3-211ENST00000505625 ATF7IPQ6VMQ6 1270 aa6.07□□□□□ -1.44
MATR3-211ENST00000505625 USP21Q9UK80 565 aa6.07□□□□□ -1.44
MATR3-211ENST00000505625 PPP1R12AO14974 1030 aaPredicted RBP6.07□□□□□ -1.44
MATR3-211ENST00000505625 PDE4AP27815 886 aa6.07□□□□□ -1.44
MATR3-211ENST00000505625 DNA2P51530 1060 aa6.07□□□□□ -1.44
MATR3-211ENST00000505625 C4orf50Q6ZRC1 276 aa6.07□□□□□ -1.44
MATR3-211ENST00000505625 ITM2BQ9Y287 266 aa6.07□□□□□ -1.44
MATR3-211ENST00000505625 SLU7O95391 586 aaKnown RBP6.07□□□□□ -1.44
MATR3-211ENST00000505625 FAM193AP78312 1265 aa6.07□□□□□ -1.44
MATR3-211ENST00000505625 FHOD3Q2V2M9 1422 aa6.07□□□□□ -1.44
MATR3-211ENST00000505625 KRT28Q7Z3Y7 464 aa6.07□□□□□ -1.44
MATR3-211ENST00000505625 CCDC191Q8NCU4 936 aa6.07□□□□□ -1.44
MATR3-211ENST00000505625 CCDC144AA2RUR9 1427 aa6.06□□□□□ -1.44
MATR3-211ENST00000505625 MIA2Q96PC5 1412 aa6.06□□□□□ -1.44
MATR3-211ENST00000505625 TMCO5BA8MYB1 307 aa6.06□□□□□ -1.44
MATR3-211ENST00000505625 PPP2R5CQ13362 524 aa6.06□□□□□ -1.44
MATR3-211ENST00000505625 GIGYF2Q6Y7W6 1299 aaKnown RBP6.06□□□□□ -1.44
MATR3-211ENST00000505625 PAGR1Q9BTK6 254 aa6.06□□□□□ -1.44
MATR3-211ENST00000505625 M0QZ92 97 aa6.06□□□□□ -1.44
MATR3-211ENST00000505625 GPS2Q13227 327 aa6.06□□□□□ -1.44
MATR3-211ENST00000505625 STIM1Q13586 685 aa6.06□□□□□ -1.44
MATR3-211ENST00000505625 RAB3GAP1Q15042 981 aa6.06□□□□□ -1.44
MATR3-211ENST00000505625 HS1BP3Q53T59 392 aa6.06□□□□□ -1.44
MATR3-211ENST00000505625 PRPF31Q8WWY3 499 aaKnown RBP6.06□□□□□ -1.44
MATR3-211ENST00000505625 CFAP58Q5T655 872 aa6.06□□□□□ -1.44
MATR3-211ENST00000505625 CLASRPQ8N2M8 674 aaKnown RBP6.06□□□□□ -1.44
MATR3-211ENST00000505625 TSC1Q92574 1164 aa6.06□□□□□ -1.44
MATR3-211ENST00000505625 JARID2Q92833 1246 aaPredicted RBP6.06□□□□□ -1.44
MATR3-211ENST00000505625 SPATA32Q96LK8 384 aa6.06□□□□□ -1.44
MATR3-211ENST00000505625 CCDC113Q9H0I3 377 aa6.06□□□□□ -1.44
MATR3-211ENST00000505625 ATAD2BQ9ULI0 1458 aa6.06□□□□□ -1.44
MATR3-211ENST00000505625 DCPSQ96C86 337 aaKnown RBP6.06□□□□□ -1.44
MATR3-211ENST00000505625 IQSEC3Q9UPP2 1182 aaPredicted RBP6.06□□□□□ -1.44
MATR3-211ENST00000505625 TOP2AP11388 1531 aaKnown RBP6.06□□□□□ -1.44
MATR3-211ENST00000505625 CALM1P0DP23 149 aa6.06□□□□□ -1.44
MATR3-211ENST00000505625 CALM2P0DP24 149 aa6.06□□□□□ -1.44
MATR3-211ENST00000505625 CALM3P0DP25 149 aa6.06□□□□□ -1.44
MATR3-211ENST00000505625 HARSP12081 509 aaKnown RBP6.06□□□□□ -1.44
MATR3-211ENST00000505625 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.06□□□□□ -1.44
MATR3-211ENST00000505625 REC8O95072 547 aa6.06□□□□□ -1.44
MATR3-211ENST00000505625 UBE4AQ14139 1066 aa6.06□□□□□ -1.44
MATR3-211ENST00000505625 RTCBQ9Y3I0 505 aaKnown RBP6.06□□□□□ -1.44
MATR3-211ENST00000505625 INF2Q27J81 1249 aa6.05□□□□□ -1.44
MATR3-211ENST00000505625 Q3C1V9 767 aa6.05□□□□□ -1.44
MATR3-211ENST00000505625 FILIP1LQ4L180 1135 aa6.05□□□□□ -1.44
MATR3-211ENST00000505625 CCDC73Q6ZRK6 1079 aa6.05□□□□□ -1.44
MATR3-211ENST00000505625 SLC5A1P13866 664 aa6.05□□□□□ -1.44
MATR3-211ENST00000505625 RXRBP28702 533 aa6.05□□□□□ -1.44
MATR3-211ENST00000505625 ZSCAN25Q6NSZ9 544 aa6.05□□□□□ -1.44
MATR3-211ENST00000505625 RBM46Q8TBY0 533 aaKnown RBP6.05□□□□□ -1.44
MATR3-211ENST00000505625 ALS2CR12Q96Q35 445 aa6.05□□□□□ -1.44
MATR3-211ENST00000505625 CADPSQ9ULU8 1353 aa6.05□□□□□ -1.44
MATR3-211ENST00000505625 CABLES1Q8TDN4 633 aa6.05□□□□□ -1.44
MATR3-211ENST00000505625 CCDC85CA6NKD9 419 aa6.05□□□□□ -1.44
MATR3-211ENST00000505625 STAMBPO95630 424 aa6.05□□□□□ -1.44
MATR3-211ENST00000505625 TNNI2P48788 182 aa6.05□□□□□ -1.44
MATR3-211ENST00000505625 FBXW4P57775 412 aa6.05□□□□□ -1.44
MATR3-211ENST00000505625 FAM177A1Q8N128 213 aaPredicted RBP6.05□□□□□ -1.44
MATR3-211ENST00000505625 CCDC24Q8N4L8 307 aa6.05□□□□□ -1.44
MATR3-211ENST00000505625 TCHPQ9BT92 498 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms