RNA–Protein interactions for RNA: ENST00000505526.1

PDCD6-203, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-203ENST00000505526 KNSTRNQ9Y448 316 aa21.33■■□□□ 1.01
PDCD6-203ENST00000505526 MAP2P11137 1827 aaKnown RBP21.33■■□□□ 1.01
PDCD6-203ENST00000505526 PPM1GO15355 546 aaPredicted RBP21.32■■□□□ 1
PDCD6-203ENST00000505526 TMOD3Q9NYL9 352 aa21.32■■□□□ 1
PDCD6-203ENST00000505526 GNPATO15228 680 aa21.32■■□□□ 1
PDCD6-203ENST00000505526 DIEXFQ68CQ4 756 aaKnown RBP21.32■■□□□ 1
PDCD6-203ENST00000505526 ASAP1Q9ULH1 1129 aa21.32■■□□□ 1
PDCD6-203ENST00000505526 ITPK1Q13572 414 aa21.31■■□□□ 1
PDCD6-203ENST00000505526 KIF3CO14782 793 aa21.3■■□□□ 1
PDCD6-203ENST00000505526 ATP6V1AP38606 617 aa21.3■■□□□ 1
PDCD6-203ENST00000505526 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.3■■□□□ 1
PDCD6-203ENST00000505526 EYA1Q99502 592 aa21.29■■□□□ 1
PDCD6-203ENST00000505526 MMP10P09238 476 aa21.28■■□□□ 1
PDCD6-203ENST00000505526 CNGB1Q14028 1251 aaPredicted RBP21.27■■□□□ 1
PDCD6-203ENST00000505526 AMER1Q5JTC6 1135 aaPredicted RBP21.27■■□□□ 1
PDCD6-203ENST00000505526 IFNL2Q8IZJ0 200 aa21.27■■□□□ 1
PDCD6-203ENST00000505526 CICQ96RK0 1608 aaPredicted RBP21.27■■□□□ 1
PDCD6-203ENST00000505526 PHKG2P15735 406 aa21.26■□□□□ 0.99
PDCD6-203ENST00000505526 ATG3Q9NT62 314 aa21.26■□□□□ 0.99
PDCD6-203ENST00000505526 ANKRD26Q9UPS8 1709 aa21.26■□□□□ 0.99
PDCD6-203ENST00000505526 PXDNLA1KZ92 1463 aa21.25■□□□□ 0.99
PDCD6-203ENST00000505526 CC2D1BQ5T0F9 858 aaKnown RBP21.25■□□□□ 0.99
PDCD6-203ENST00000505526 TGFB2P61812 414 aa21.24■□□□□ 0.99
PDCD6-203ENST00000505526 TRAPPC3LQ5T215 181 aa21.23■□□□□ 0.99
PDCD6-203ENST00000505526 RTCBQ9Y3I0 505 aaKnown RBP21.23■□□□□ 0.99
PDCD6-203ENST00000505526 NPC1L1Q9UHC9 1359 aa21.22■□□□□ 0.99
PDCD6-203ENST00000505526 A0A0G2JLW4 131 aa21.22■□□□□ 0.99
PDCD6-203ENST00000505526 NLGN1Q8N2Q7 840 aa21.22■□□□□ 0.99
PDCD6-203ENST00000505526 POLKQ9UBT6 870 aa21.22■□□□□ 0.99
PDCD6-203ENST00000505526 BCS1LQ9Y276 419 aa21.22■□□□□ 0.99
PDCD6-203ENST00000505526 KIF13BQ9NQT8 1826 aa21.22■□□□□ 0.99
PDCD6-203ENST00000505526 KIAA1551Q9HCM1 1747 aa21.21■□□□□ 0.99
PDCD6-203ENST00000505526 KDRP35968 1356 aa21.21■□□□□ 0.99
PDCD6-203ENST00000505526 N4BP2Q86UW6 1770 aaPredicted RBP21.2■□□□□ 0.98
PDCD6-203ENST00000505526 APLP1P51693 650 aa21.2■□□□□ 0.98
PDCD6-203ENST00000505526 SLC4A9Q96Q91 983 aa21.2■□□□□ 0.98
PDCD6-203ENST00000505526 C10orf71Q711Q0 1435 aa21.19■□□□□ 0.98
PDCD6-203ENST00000505526 ANP32CO43423 234 aa21.19■□□□□ 0.98
PDCD6-203ENST00000505526 TOMM70O94826 608 aa21.19■□□□□ 0.98
PDCD6-203ENST00000505526 EIF4A2Q14240 407 aaKnown RBP21.19■□□□□ 0.98
PDCD6-203ENST00000505526 ARHGAP27Q6ZUM4 889 aa21.19■□□□□ 0.98
PDCD6-203ENST00000505526 ARHGEF1Q92888 912 aaKnown RBP21.19■□□□□ 0.98
PDCD6-203ENST00000505526 RBM42Q9BTD8 480 aaKnown RBP21.19■□□□□ 0.98
PDCD6-203ENST00000505526 ADRA2BP18089 450 aa21.18■□□□□ 0.98
PDCD6-203ENST00000505526 CCDC87Q9NVE4 849 aa21.18■□□□□ 0.98
PDCD6-203ENST00000505526 ERVV-2B6SEH9 535 aa21.17■□□□□ 0.98
PDCD6-203ENST00000505526 DPEP1P16444 411 aa21.17■□□□□ 0.98
PDCD6-203ENST00000505526 RC3H1Q5TC82 1133 aaKnown RBP21.17■□□□□ 0.98
PDCD6-203ENST00000505526 GYS1P13807 737 aa21.16■□□□□ 0.98
PDCD6-203ENST00000505526 ZNF831Q5JPB2 1677 aa21.16■□□□□ 0.98
PDCD6-203ENST00000505526 MORC1Q86VD1 984 aa21.16■□□□□ 0.98
PDCD6-203ENST00000505526 PLEKHG2Q9H7P9 1386 aa21.16■□□□□ 0.98
PDCD6-203ENST00000505526 PRKRIP1Q9H875 184 aaPredicted RBP21.16■□□□□ 0.98
PDCD6-203ENST00000505526 CNTNAP4Q9C0A0 1308 aa21.15■□□□□ 0.98
PDCD6-203ENST00000505526 RPS6KA4O75676 772 aa21.15■□□□□ 0.98
PDCD6-203ENST00000505526 FCHSD2O94868 740 aa21.15■□□□□ 0.98
PDCD6-203ENST00000505526 RFC4P35249 363 aa21.15■□□□□ 0.98
PDCD6-203ENST00000505526 TNNT2P45379 298 aaPredicted RBP21.15■□□□□ 0.98
PDCD6-203ENST00000505526 DCAF5Q96JK2 942 aa21.15■□□□□ 0.98
PDCD6-203ENST00000505526 PARP3Q9Y6F1 533 aa21.15■□□□□ 0.98
PDCD6-203ENST00000505526 C4AP0C0L4 1744 aa21.15■□□□□ 0.98
PDCD6-203ENST00000505526 HSP90AB1P08238 724 aaKnown RBP21.14■□□□□ 0.98
PDCD6-203ENST00000505526 DNAJC5GQ8N7S2 189 aa21.14■□□□□ 0.98
PDCD6-203ENST00000505526 NMRK2Q9NPI5 230 aa21.14■□□□□ 0.98
PDCD6-203ENST00000505526 COL5A3P25940 1745 aaPredicted RBP21.13■□□□□ 0.97
PDCD6-203ENST00000505526 RALBP1Q15311 655 aa21.13■□□□□ 0.97
PDCD6-203ENST00000505526 KCNA3P22001 575 aa21.11■□□□□ 0.97
PDCD6-203ENST00000505526 CABP4P57796 275 aa21.11■□□□□ 0.97
PDCD6-203ENST00000505526 PLEKHO1Q53GL0 409 aaPredicted RBP21.11■□□□□ 0.97
PDCD6-203ENST00000505526 C9orf131Q5VYM1 1079 aa21.1■□□□□ 0.97
PDCD6-203ENST00000505526 KDM6AO15550 1401 aaPredicted RBP21.1■□□□□ 0.97
PDCD6-203ENST00000505526 BRCA1P38398 1863 aaKnown RBP21.1■□□□□ 0.97
PDCD6-203ENST00000505526 ZNF530Q6P9A1 599 aaPredicted RBP21.09■□□□□ 0.97
PDCD6-203ENST00000505526 PIM2Q9P1W9 311 aa21.09■□□□□ 0.97
PDCD6-203ENST00000505526 AMOTQ4VCS5 1084 aa21.08■□□□□ 0.97
PDCD6-203ENST00000505526 MIER1Q8N108 512 aa21.08■□□□□ 0.97
PDCD6-203ENST00000505526 RBM46Q8TBY0 533 aaKnown RBP21.08■□□□□ 0.97
PDCD6-203ENST00000505526 PTCD1O75127 700 aaKnown RBP21.07■□□□□ 0.96
PDCD6-203ENST00000505526 C16orf71Q8IYS4 520 aaPredicted RBP21.07■□□□□ 0.96
PDCD6-203ENST00000505526 MYH14Q7Z406 1995 aaKnown RBP21.07■□□□□ 0.96
PDCD6-203ENST00000505526 CRKLP46109 303 aaKnown RBP21.07■□□□□ 0.96
PDCD6-203ENST00000505526 MTHFSP49914 203 aa21.07■□□□□ 0.96
PDCD6-203ENST00000505526 SRP68Q9UHB9 627 aaKnown RBP21.07■□□□□ 0.96
PDCD6-203ENST00000505526 ARFGEF1Q9Y6D6 1849 aa21.06■□□□□ 0.96
PDCD6-203ENST00000505526 MYBBP1AQ9BQG0 1328 aaKnown RBP21.06■□□□□ 0.96
PDCD6-203ENST00000505526 PPP2R1AP30153 589 aa21.06■□□□□ 0.96
PDCD6-203ENST00000505526 DALRD3Q5D0E6 543 aaKnown RBP21.06■□□□□ 0.96
PDCD6-203ENST00000505526 FKBP8Q14318 412 aa21.05■□□□□ 0.96
PDCD6-203ENST00000505526 WDR90Q96KV7 1748 aa21.05■□□□□ 0.96
PDCD6-203ENST00000505526 USP42Q9H9J4 1324 aaKnown RBP21.04■□□□□ 0.96
PDCD6-203ENST00000505526 DDR1Q08345 913 aa21.04■□□□□ 0.96
PDCD6-203ENST00000505526 C1orf141Q5JVX7 400 aa21.04■□□□□ 0.96
PDCD6-203ENST00000505526 NFATC2IPQ8NCF5 419 aa21.04■□□□□ 0.96
PDCD6-203ENST00000505526 KDM2BQ8NHM5 1336 aa21.04■□□□□ 0.96
PDCD6-203ENST00000505526 RNF181Q9P0P0 153 aa21.03■□□□□ 0.96
PDCD6-203ENST00000505526 KCPQ6ZWJ8 1503 aa21.02■□□□□ 0.96
PDCD6-203ENST00000505526 HTRA3P83110 453 aa21.02■□□□□ 0.96
PDCD6-203ENST00000505526 FSTL1Q12841 308 aa21.02■□□□□ 0.96
PDCD6-203ENST00000505526 AEBP1Q8IUX7 1158 aa21.02■□□□□ 0.96
PDCD6-203ENST00000505526 CHRNA5P30532 468 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms