RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 ALKBH2Q6NS38 261 aa5.02□□□□□ -1.61
HMGB1P22-201ENST00000505315 RNF19BQ6ZMZ0 732 aa5.02□□□□□ -1.61
HMGB1P22-201ENST00000505315 NIF3L1Q9GZT8 377 aa5.02□□□□□ -1.61
HMGB1P22-201ENST00000505315 NOP58Q9Y2X3 529 aaKnown RBP5.02□□□□□ -1.61
HMGB1P22-201ENST00000505315 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P22-201ENST00000505315 MRPL42Q9Y6G3 142 aaKnown RBP5.02□□□□□ -1.61
HMGB1P22-201ENST00000505315 PNMA6FA0A0J9YX94 578 aa5.01□□□□□ -1.61
HMGB1P22-201ENST00000505315 PPP1R12AO14974 1030 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P22-201ENST00000505315 GIGYF1O75420 1035 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P22-201ENST00000505315 F12P00748 615 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P22-201ENST00000505315 RBL2Q08999 1139 aa5.01□□□□□ -1.61
HMGB1P22-201ENST00000505315 AGERQ15109 404 aa5.01□□□□□ -1.61
HMGB1P22-201ENST00000505315 PTPRNQ16849 979 aa5.01□□□□□ -1.61
HMGB1P22-201ENST00000505315 RNF20Q5VTR2 975 aa5.01□□□□□ -1.61
HMGB1P22-201ENST00000505315 SAMD7Q7Z3H4 446 aa5.01□□□□□ -1.61
HMGB1P22-201ENST00000505315 FILIP1Q7Z7B0 1213 aa5.01□□□□□ -1.61
HMGB1P22-201ENST00000505315 USP48Q86UV5 1035 aa5.01□□□□□ -1.61
HMGB1P22-201ENST00000505315 JAZF1Q86VZ6 243 aa5.01□□□□□ -1.61
HMGB1P22-201ENST00000505315 NLGN1Q8N2Q7 840 aa5.01□□□□□ -1.61
HMGB1P22-201ENST00000505315 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.01□□□□□ -1.61
HMGB1P22-201ENST00000505315 UBE2Q2Q8WVN8 375 aa5.01□□□□□ -1.61
HMGB1P22-201ENST00000505315 SLC39A7Q92504 469 aa5.01□□□□□ -1.61
HMGB1P22-201ENST00000505315 GPKOWQ92917 476 aaPredicted RBP eCLIP5.01□□□□□ -1.61
HMGB1P22-201ENST00000505315 DCBLD2Q96PD2 775 aa5.01□□□□□ -1.61
HMGB1P22-201ENST00000505315 CITED4Q96RK1 184 aa5.01□□□□□ -1.61
HMGB1P22-201ENST00000505315 SETDB2Q96T68 719 aa5.01□□□□□ -1.61
HMGB1P22-201ENST00000505315 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.01□□□□□ -1.61
HMGB1P22-201ENST00000505315 CCDC87Q9NVE4 849 aa5.01□□□□□ -1.61
HMGB1P22-201ENST00000505315 CHIC2Q9UKJ5 165 aa5.01□□□□□ -1.61
HMGB1P22-201ENST00000505315 SUGT1Q9Y2Z0 365 aa5.01□□□□□ -1.61
HMGB1P22-201ENST00000505315 PCDHB11Q9Y5F2 797 aa5.01□□□□□ -1.61
HMGB1P22-201ENST00000505315 COL4A3BPQ9Y5P4 624 aa5.01□□□□□ -1.61
HMGB1P22-201ENST00000505315 PEX14O75381 377 aa5□□□□□ -1.61
HMGB1P22-201ENST00000505315 MYCP01106 439 aaPredicted RBP5□□□□□ -1.61
HMGB1P22-201ENST00000505315 JUNDP17535 347 aa5□□□□□ -1.61
HMGB1P22-201ENST00000505315 HSD3B2P26439 372 aa5□□□□□ -1.61
HMGB1P22-201ENST00000505315 ZNF746Q6NUN9 644 aaPredicted RBP5□□□□□ -1.61
HMGB1P22-201ENST00000505315 BLOC1S3Q6QNY0 202 aa5□□□□□ -1.61
HMGB1P22-201ENST00000505315 CKAP2LQ8IYA6 745 aa5□□□□□ -1.61
HMGB1P22-201ENST00000505315 EXOC8Q8IYI6 725 aa5□□□□□ -1.61
HMGB1P22-201ENST00000505315 SCG3Q8WXD2 468 aaKnown RBP5□□□□□ -1.61
HMGB1P22-201ENST00000505315 GMLQ99445 158 aa5□□□□□ -1.61
HMGB1P22-201ENST00000505315 NEUROD4Q9HD90 331 aa5□□□□□ -1.61
HMGB1P22-201ENST00000505315 PCDHGA11Q9Y5H2 935 aa5□□□□□ -1.61
HMGB1P22-201ENST00000505315 EMILIN1Q9Y6C2 1016 aa5□□□□□ -1.61
HMGB1P22-201ENST00000505315 K7ELQ4 463 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P22-201ENST00000505315 HAX1O00165 279 aa4.99□□□□□ -1.61
HMGB1P22-201ENST00000505315 CCNYL3P0C7X3 344 aa4.99□□□□□ -1.61
HMGB1P22-201ENST00000505315 EIF1AXP47813 144 aaKnown RBP4.99□□□□□ -1.61
HMGB1P22-201ENST00000505315 RAB15P59190 212 aa4.99□□□□□ -1.61
HMGB1P22-201ENST00000505315 DSC3Q14574 896 aa4.99□□□□□ -1.61
HMGB1P22-201ENST00000505315 ALG1LQ6GMV1 187 aa4.99□□□□□ -1.61
HMGB1P22-201ENST00000505315 C16orf46Q6P387 395 aa4.99□□□□□ -1.61
HMGB1P22-201ENST00000505315 GGT7Q9UJ14 662 aa4.99□□□□□ -1.61
HMGB1P22-201ENST00000505315 G3BP2Q9UN86 482 aaKnown RBP4.99□□□□□ -1.61
HMGB1P22-201ENST00000505315 FOXO3O43524 673 aa4.98□□□□□ -1.61
HMGB1P22-201ENST00000505315 DNAJC6O75061 913 aa4.98□□□□□ -1.61
HMGB1P22-201ENST00000505315 PARNO95453 639 aaKnown RBP4.98□□□□□ -1.61
HMGB1P22-201ENST00000505315 SSBP05455 408 aaKnown RBP eCLIP4.98□□□□□ -1.61
HMGB1P22-201ENST00000505315 IGFBP4P22692 258 aa4.98□□□□□ -1.61
HMGB1P22-201ENST00000505315 GNA15P30679 374 aa4.98□□□□□ -1.61
HMGB1P22-201ENST00000505315 CHMP4BP1P59074 171 aa4.98□□□□□ -1.61
HMGB1P22-201ENST00000505315 NBPF20Q3BBV1 942 aa4.98□□□□□ -1.61
HMGB1P22-201ENST00000505315 HS2ST1Q7LGA3 356 aa4.98□□□□□ -1.61
HMGB1P22-201ENST00000505315 TICAM2Q86XR7 235 aa4.98□□□□□ -1.61
HMGB1P22-201ENST00000505315 MCF2L2Q86YR7 1114 aa4.98□□□□□ -1.61
HMGB1P22-201ENST00000505315 COL26A1Q96A83 441 aa4.98□□□□□ -1.61
HMGB1P22-201ENST00000505315 CCDC136Q96JN2 1154 aa4.98□□□□□ -1.61
HMGB1P22-201ENST00000505315 NUDT12Q9BQG2 462 aa4.98□□□□□ -1.61
HMGB1P22-201ENST00000505315 OCSTAMPQ9BR26 566 aa4.98□□□□□ -1.61
HMGB1P22-201ENST00000505315 SLKQ9H2G2 1235 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P22-201ENST00000505315 IFT57Q9NWB7 429 aa4.98□□□□□ -1.61
HMGB1P22-201ENST00000505315 CHPF2Q9P2E5 772 aa4.98□□□□□ -1.61
HMGB1P22-201ENST00000505315 DDX41Q9UJV9 622 aaKnown RBP4.98□□□□□ -1.61
HMGB1P22-201ENST00000505315 U2SURPO15042 1029 aaKnown RBP4.97□□□□□ -1.61
HMGB1P22-201ENST00000505315 GPR182O15218 404 aa4.97□□□□□ -1.61
HMGB1P22-201ENST00000505315 ZBTB24O43167 697 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P22-201ENST00000505315 ACTN4O43707 911 aaKnown RBP4.97□□□□□ -1.61
HMGB1P22-201ENST00000505315 MAP4K4O95819 1239 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P22-201ENST00000505315 EIF4BP23588 611 aaKnown RBP4.97□□□□□ -1.61
HMGB1P22-201ENST00000505315 RACK1P63244 317 aaKnown RBP4.97□□□□□ -1.61
HMGB1P22-201ENST00000505315 FAM98CQ17RN3 349 aaKnown RBP4.97□□□□□ -1.61
HMGB1P22-201ENST00000505315 TMED8Q6PL24 325 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P22-201ENST00000505315 CCDC24Q8N4L8 307 aa4.97□□□□□ -1.61
HMGB1P22-201ENST00000505315 TTC16Q8NEE8 873 aa4.97□□□□□ -1.61
HMGB1P22-201ENST00000505315 MORC4Q8TE76 937 aa4.97□□□□□ -1.61
HMGB1P22-201ENST00000505315 SLC10A4Q96EP9 437 aa4.97□□□□□ -1.61
HMGB1P22-201ENST00000505315 CRELD1Q96HD1 420 aa4.97□□□□□ -1.61
HMGB1P22-201ENST00000505315 SAP130Q9H0E3 1048 aa4.97□□□□□ -1.61
HMGB1P22-201ENST00000505315 ZNF358Q9NW07 568 aa4.97□□□□□ -1.61
HMGB1P22-201ENST00000505315 SLC52A1Q9NWF4 448 aa4.97□□□□□ -1.61
HMGB1P22-201ENST00000505315 METRNQ9UJH8 293 aa4.97□□□□□ -1.61
HMGB1P22-201ENST00000505315 ATAD2Q6PL18 1390 aa4.96□□□□□ -1.62
HMGB1P22-201ENST00000505315 M0R2N6 131 aa4.96□□□□□ -1.62
HMGB1P22-201ENST00000505315 PPP1R12BO60237 982 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P22-201ENST00000505315 FZD6O60353 706 aa4.96□□□□□ -1.62
HMGB1P22-201ENST00000505315 S100BP04271 92 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P22-201ENST00000505315 XRCC5P13010 732 aaKnown RBP4.96□□□□□ -1.62
HMGB1P22-201ENST00000505315 NPR3P17342 541 aa4.96□□□□□ -1.62
HMGB1P22-201ENST00000505315 DNM1Q05193 864 aaKnown RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms