RNA–Protein interactions for RNA: ENST00000505205.1

TRIM23-204, Transcript of tripartite motif containing 23, humanhuman

TSL 3

Gene TRIM23, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-204ENST00000505205 CYP27B1O15528 508 aa12.93□□□□□ -0.34
TRIM23-204ENST00000505205 HMGB2P26583 209 aaKnown RBP12.93□□□□□ -0.34
TRIM23-204ENST00000505205 LINC00116Q8NCU8 138 aa12.93□□□□□ -0.34
TRIM23-204ENST00000505205 SSFA2P28290 1259 aa12.92□□□□□ -0.34
TRIM23-204ENST00000505205 SMARCC1Q92922 1105 aaPredicted RBP12.92□□□□□ -0.34
TRIM23-204ENST00000505205 PUS7Q96PZ0 661 aaKnown RBP12.92□□□□□ -0.34
TRIM23-204ENST00000505205 NMRK2Q9NPI5 230 aa12.92□□□□□ -0.34
TRIM23-204ENST00000505205 BRCA1P38398 1863 aaKnown RBP12.91□□□□□ -0.34
TRIM23-204ENST00000505205 HTRA3P83110 453 aa12.91□□□□□ -0.34
TRIM23-204ENST00000505205 COL13A1Q5TAT6 717 aaPredicted RBP12.91□□□□□ -0.34
TRIM23-204ENST00000505205 PIGBQ92521 554 aa12.91□□□□□ -0.34
TRIM23-204ENST00000505205 MMP10P09238 476 aa12.9□□□□□ -0.34
TRIM23-204ENST00000505205 HSP90AB2PQ58FF8 381 aa12.9□□□□□ -0.34
TRIM23-204ENST00000505205 BCS1LQ9Y276 419 aa12.9□□□□□ -0.34
TRIM23-204ENST00000505205 INSRP06213 1382 aa12.9□□□□□ -0.34
TRIM23-204ENST00000505205 KIF20BQ96Q89 1820 aa12.9□□□□□ -0.34
TRIM23-204ENST00000505205 PCNTO95613 3336 aa12.9□□□□□ -0.35
TRIM23-204ENST00000505205 LOC102724428A0A0B4J2F2 783 aa12.89□□□□□ -0.35
TRIM23-204ENST00000505205 A0A0G2JLW4 131 aa12.89□□□□□ -0.35
TRIM23-204ENST00000505205 SPDYE2BA6NHP3 402 aa12.89□□□□□ -0.35
TRIM23-204ENST00000505205 GNPATO15228 680 aa12.89□□□□□ -0.35
TRIM23-204ENST00000505205 SPDYE6P0CI01 402 aa12.89□□□□□ -0.35
TRIM23-204ENST00000505205 SIK1P57059 783 aa12.89□□□□□ -0.35
TRIM23-204ENST00000505205 ITPK1Q13572 414 aa12.89□□□□□ -0.35
TRIM23-204ENST00000505205 SPDYE2Q495Y8 402 aa12.89□□□□□ -0.35
TRIM23-204ENST00000505205 GGNBP2Q9H3C7 697 aa12.89□□□□□ -0.35
TRIM23-204ENST00000505205 C10orf71Q711Q0 1435 aa12.88□□□□□ -0.35
TRIM23-204ENST00000505205 FYB1O15117 783 aa12.88□□□□□ -0.35
TRIM23-204ENST00000505205 ARHGAP27Q6ZUM4 889 aa12.88□□□□□ -0.35
TRIM23-204ENST00000505205 KLRG1Q96E93 195 aa12.88□□□□□ -0.35
TRIM23-204ENST00000505205 TESK2Q96S53 571 aa12.88□□□□□ -0.35
TRIM23-204ENST00000505205 C4AP0C0L4 1744 aa12.88□□□□□ -0.35
TRIM23-204ENST00000505205 FLT4P35916 1363 aa12.87□□□□□ -0.35
TRIM23-204ENST00000505205 JMYQ8N9B5 988 aa12.87□□□□□ -0.35
TRIM23-204ENST00000505205 RBM46Q8TBY0 533 aaKnown RBP12.87□□□□□ -0.35
TRIM23-204ENST00000505205 ARFGEF1Q9Y6D6 1849 aa12.87□□□□□ -0.35
TRIM23-204ENST00000505205 DPEP1P16444 411 aa12.86□□□□□ -0.35
TRIM23-204ENST00000505205 ATP6V1AP38606 617 aa12.86□□□□□ -0.35
TRIM23-204ENST00000505205 TGFB2P61812 414 aa12.86□□□□□ -0.35
TRIM23-204ENST00000505205 NKX1-1Q15270 411 aaPredicted RBP12.86□□□□□ -0.35
TRIM23-204ENST00000505205 ASAP1Q9ULH1 1129 aa12.86□□□□□ -0.35
TRIM23-204ENST00000505205 KCPQ6ZWJ8 1503 aa12.85□□□□□ -0.35
TRIM23-204ENST00000505205 FCHSD2O94868 740 aa12.85□□□□□ -0.35
TRIM23-204ENST00000505205 TMOD3Q9NYL9 352 aa12.85□□□□□ -0.35
TRIM23-204ENST00000505205 NCAPD2Q15021 1401 aa12.85□□□□□ -0.35
TRIM23-204ENST00000505205 KIF24Q5T7B8 1368 aa12.84□□□□□ -0.35
TRIM23-204ENST00000505205 ST20-MTHFSA0A0A6YYL1 179 aa12.84□□□□□ -0.35
TRIM23-204ENST00000505205 C9orf131Q5VYM1 1079 aa12.84□□□□□ -0.35
TRIM23-204ENST00000505205 C16orf71Q8IYS4 520 aaPredicted RBP12.84□□□□□ -0.35
TRIM23-204ENST00000505205 TNS4Q8IZW8 715 aa12.84□□□□□ -0.35
TRIM23-204ENST00000505205 COL5A3P25940 1745 aaPredicted RBP12.84□□□□□ -0.35
TRIM23-204ENST00000505205 TNRC6CQ9HCJ0 1690 aaKnown RBP12.83□□□□□ -0.35
TRIM23-204ENST00000505205 KDRP35968 1356 aa12.83□□□□□ -0.36
TRIM23-204ENST00000505205 PLEKHG2Q9H7P9 1386 aa12.83□□□□□ -0.36
TRIM23-204ENST00000505205 ANKRD26Q9UPS8 1709 aa12.83□□□□□ -0.36
TRIM23-204ENST00000505205 FSTL1Q12841 308 aa12.83□□□□□ -0.36
TRIM23-204ENST00000505205 SPG7Q9UQ90 795 aa12.83□□□□□ -0.36
TRIM23-204ENST00000505205 EMILIN1Q9Y6C2 1016 aa12.83□□□□□ -0.36
TRIM23-204ENST00000505205 KCNA3P22001 575 aa12.82□□□□□ -0.36
TRIM23-204ENST00000505205 TMF1P82094 1093 aa12.82□□□□□ -0.36
TRIM23-204ENST00000505205 TRAPPC3LQ5T215 181 aa12.82□□□□□ -0.36
TRIM23-204ENST00000505205 NLGN1Q8N2Q7 840 aa12.82□□□□□ -0.36
TRIM23-204ENST00000505205 RBM42Q9BTD8 480 aaKnown RBP12.82□□□□□ -0.36
TRIM23-204ENST00000505205 ATG3Q9NT62 314 aa12.82□□□□□ -0.36
TRIM23-204ENST00000505205 CCDC87Q9NVE4 849 aa12.82□□□□□ -0.36
TRIM23-204ENST00000505205 RTCBQ9Y3I0 505 aaKnown RBP12.82□□□□□ -0.36
TRIM23-204ENST00000505205 ZNF831Q5JPB2 1677 aa12.82□□□□□ -0.36
TRIM23-204ENST00000505205 SBF1O95248 1867 aa12.81□□□□□ -0.36
TRIM23-204ENST00000505205 GYS1P13807 737 aa12.81□□□□□ -0.36
TRIM23-204ENST00000505205 PRELPP51888 382 aa12.81□□□□□ -0.36
TRIM23-204ENST00000505205 ARHGEF1Q92888 912 aaKnown RBP12.81□□□□□ -0.36
TRIM23-204ENST00000505205 SLC4A9Q96Q91 983 aa12.81□□□□□ -0.36
TRIM23-204ENST00000505205 SSUH2Q9Y2M2 353 aa12.81□□□□□ -0.36
TRIM23-204ENST00000505205 PHKG2P15735 406 aa12.8□□□□□ -0.36
TRIM23-204ENST00000505205 RRAGCQ9HB90 399 aa12.8□□□□□ -0.36
TRIM23-204ENST00000505205 RNF181Q9P0P0 153 aa12.8□□□□□ -0.36
TRIM23-204ENST00000505205 PARP3Q9Y6F1 533 aa12.8□□□□□ -0.36
TRIM23-204ENST00000505205 KDM2BQ8NHM5 1336 aa12.8□□□□□ -0.36
TRIM23-204ENST00000505205 MYH14Q7Z406 1995 aaKnown RBP12.8□□□□□ -0.36
TRIM23-204ENST00000505205 DCAF5Q96JK2 942 aa12.79□□□□□ -0.36
TRIM23-204ENST00000505205 TONSLQ96HA7 1378 aa12.79□□□□□ -0.36
TRIM23-204ENST00000505205 PPM1GO15355 546 aaPredicted RBP12.78□□□□□ -0.36
TRIM23-204ENST00000505205 IFNL2Q8IZJ0 200 aa12.78□□□□□ -0.36
TRIM23-204ENST00000505205 EYA1Q99502 592 aa12.78□□□□□ -0.36
TRIM23-204ENST00000505205 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.78□□□□□ -0.36
TRIM23-204ENST00000505205 PIM2Q9P1W9 311 aa12.78□□□□□ -0.36
TRIM23-204ENST00000505205 RFC4P35249 363 aa12.77□□□□□ -0.37
TRIM23-204ENST00000505205 DALRD3Q5D0E6 543 aaKnown RBP12.77□□□□□ -0.37
TRIM23-204ENST00000505205 SMC1BQ8NDV3 1235 aa12.77□□□□□ -0.37
TRIM23-204ENST00000505205 CNTNAP4Q9C0A0 1308 aa12.77□□□□□ -0.37
TRIM23-204ENST00000505205 RPS6KA4O75676 772 aa12.76□□□□□ -0.37
TRIM23-204ENST00000505205 RC3H1Q5TC82 1133 aaKnown RBP12.76□□□□□ -0.37
TRIM23-204ENST00000505205 SLC24A1O60721 1099 aa12.75□□□□□ -0.37
TRIM23-204ENST00000505205 HSPA1AP0DMV8 641 aaKnown RBP12.75□□□□□ -0.37
TRIM23-204ENST00000505205 HSPA1BP0DMV9 641 aaKnown RBP12.75□□□□□ -0.37
TRIM23-204ENST00000505205 CHRNA5P30532 468 aa12.75□□□□□ -0.37
TRIM23-204ENST00000505205 DDR1Q08345 913 aa12.75□□□□□ -0.37
TRIM23-204ENST00000505205 WASHC2AQ641Q2 1341 aa12.75□□□□□ -0.37
TRIM23-204ENST00000505205 CARD14Q9BXL6 1004 aa12.75□□□□□ -0.37
TRIM23-204ENST00000505205 SRP68Q9UHB9 627 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms