RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 CAPN15O75808 1086 aa22.26■■□□□ 1.15
PDLIM7-213ENST00000505074 HSP90AB2PQ58FF8 381 aa22.26■■□□□ 1.15
PDLIM7-213ENST00000505074 JMYQ8N9B5 988 aa22.26■■□□□ 1.15
PDLIM7-213ENST00000505074 BRCA1P38398 1863 aaKnown RBP22.26■■□□□ 1.15
PDLIM7-213ENST00000505074 FSTL1Q12841 308 aa22.24■■□□□ 1.15
PDLIM7-213ENST00000505074 NKX1-1Q15270 411 aaPredicted RBP22.24■■□□□ 1.15
PDLIM7-213ENST00000505074 FLT4P35916 1363 aa22.24■■□□□ 1.15
PDLIM7-213ENST00000505074 ARFGEF1Q9Y6D6 1849 aa22.23■■□□□ 1.15
PDLIM7-213ENST00000505074 FYB1O15117 783 aa22.23■■□□□ 1.15
PDLIM7-213ENST00000505074 FCHSD2O94868 740 aa22.23■■□□□ 1.15
PDLIM7-213ENST00000505074 ATP6V1AP38606 617 aa22.23■■□□□ 1.15
PDLIM7-213ENST00000505074 HTRA3P83110 453 aa22.23■■□□□ 1.15
PDLIM7-213ENST00000505074 TMOD3Q9NYL9 352 aa22.23■■□□□ 1.15
PDLIM7-213ENST00000505074 KIF24Q5T7B8 1368 aa22.23■■□□□ 1.15
PDLIM7-213ENST00000505074 PLEKHG2Q9H7P9 1386 aa22.23■■□□□ 1.15
PDLIM7-213ENST00000505074 ITPK1Q13572 414 aa22.22■■□□□ 1.15
PDLIM7-213ENST00000505074 TNS4Q8IZW8 715 aa22.22■■□□□ 1.15
PDLIM7-213ENST00000505074 NLGN1Q8N2Q7 840 aa22.22■■□□□ 1.15
PDLIM7-213ENST00000505074 SPG7Q9UQ90 795 aa22.22■■□□□ 1.15
PDLIM7-213ENST00000505074 C10orf71Q711Q0 1435 aa22.22■■□□□ 1.15
PDLIM7-213ENST00000505074 CCDC87Q9NVE4 849 aa22.21■■□□□ 1.15
PDLIM7-213ENST00000505074 C4AP0C0L4 1744 aa22.2■■□□□ 1.14
PDLIM7-213ENST00000505074 DPEP1P16444 411 aa22.2■■□□□ 1.14
PDLIM7-213ENST00000505074 TRAPPC3LQ5T215 181 aa22.2■■□□□ 1.14
PDLIM7-213ENST00000505074 C9orf131Q5VYM1 1079 aa22.2■■□□□ 1.14
PDLIM7-213ENST00000505074 ASAP1Q9ULH1 1129 aa22.2■■□□□ 1.14
PDLIM7-213ENST00000505074 PRELPP51888 382 aa22.19■■□□□ 1.14
PDLIM7-213ENST00000505074 POLR3GLQ9BT43 218 aa22.19■■□□□ 1.14
PDLIM7-213ENST00000505074 TIMELESSQ9UNS1 1208 aa22.19■■□□□ 1.14
PDLIM7-213ENST00000505074 RTCBQ9Y3I0 505 aaKnown RBP22.19■■□□□ 1.14
PDLIM7-213ENST00000505074 KDM2BQ8NHM5 1336 aa22.19■■□□□ 1.14
PDLIM7-213ENST00000505074 TNRC6CQ9HCJ0 1690 aaKnown RBP22.17■■□□□ 1.14
PDLIM7-213ENST00000505074 KCPQ6ZWJ8 1503 aa22.16■■□□□ 1.14
PDLIM7-213ENST00000505074 CLSPNQ9HAW4 1339 aa22.16■■□□□ 1.14
PDLIM7-213ENST00000505074 PARP3Q9Y6F1 533 aa22.16■■□□□ 1.14
PDLIM7-213ENST00000505074 ATG3Q9NT62 314 aa22.15■■□□□ 1.14
PDLIM7-213ENST00000505074 NCAPD2Q15021 1401 aa22.14■■□□□ 1.14
PDLIM7-213ENST00000505074 ZNF831Q5JPB2 1677 aa22.14■■□□□ 1.14
PDLIM7-213ENST00000505074 ADRA2BP18089 450 aa22.14■■□□□ 1.13
PDLIM7-213ENST00000505074 RRAGCQ9HB90 399 aa22.14■■□□□ 1.13
PDLIM7-213ENST00000505074 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.14■■□□□ 1.13
PDLIM7-213ENST00000505074 SBF1O95248 1867 aa22.13■■□□□ 1.13
PDLIM7-213ENST00000505074 IFNL2Q8IZJ0 200 aa22.13■■□□□ 1.13
PDLIM7-213ENST00000505074 ARHGEF1Q92888 912 aaKnown RBP22.13■■□□□ 1.13
PDLIM7-213ENST00000505074 PIM2Q9P1W9 311 aa22.13■■□□□ 1.13
PDLIM7-213ENST00000505074 GYS1P13807 737 aa22.12■■□□□ 1.13
PDLIM7-213ENST00000505074 KCNA3P22001 575 aa22.12■■□□□ 1.13
PDLIM7-213ENST00000505074 RFC4P35249 363 aa22.12■■□□□ 1.13
PDLIM7-213ENST00000505074 RNF181Q9P0P0 153 aa22.12■■□□□ 1.13
PDLIM7-213ENST00000505074 COL5A3P25940 1745 aaPredicted RBP22.11■■□□□ 1.13
PDLIM7-213ENST00000505074 PHKG2P15735 406 aa22.11■■□□□ 1.13
PDLIM7-213ENST00000505074 RC3H1Q5TC82 1133 aaKnown RBP22.11■■□□□ 1.13
PDLIM7-213ENST00000505074 SMC1BQ8NDV3 1235 aa22.11■■□□□ 1.13
PDLIM7-213ENST00000505074 CARD14Q9BXL6 1004 aa22.11■■□□□ 1.13
PDLIM7-213ENST00000505074 PPM1GO15355 546 aaPredicted RBP22.1■■□□□ 1.13
PDLIM7-213ENST00000505074 DCAF5Q96JK2 942 aa22.1■■□□□ 1.13
PDLIM7-213ENST00000505074 EMILIN1Q9Y6C2 1016 aa22.1■■□□□ 1.13
PDLIM7-213ENST00000505074 KDRP35968 1356 aa22.1■■□□□ 1.13
PDLIM7-213ENST00000505074 DALRD3Q5D0E6 543 aaKnown RBP22.09■■□□□ 1.13
PDLIM7-213ENST00000505074 CCER1Q8TC90 406 aaPredicted RBP22.09■■□□□ 1.13
PDLIM7-213ENST00000505074 RBM42Q9BTD8 480 aaKnown RBP22.09■■□□□ 1.13
PDLIM7-213ENST00000505074 RPS6KA4O75676 772 aa22.08■■□□□ 1.13
PDLIM7-213ENST00000505074 ANKRD26Q9UPS8 1709 aa22.08■■□□□ 1.12
PDLIM7-213ENST00000505074 CNTNAP4Q9C0A0 1308 aa22.07■■□□□ 1.12
PDLIM7-213ENST00000505074 SLC4A9Q96Q91 983 aa22.06■■□□□ 1.12
PDLIM7-213ENST00000505074 EYA1Q99502 592 aa22.06■■□□□ 1.12
PDLIM7-213ENST00000505074 MYH14Q7Z406 1995 aaKnown RBP22.06■■□□□ 1.12
PDLIM7-213ENST00000505074 HSPA1AP0DMV8 641 aaKnown RBP22.05■■□□□ 1.12
PDLIM7-213ENST00000505074 HSPA1BP0DMV9 641 aaKnown RBP22.05■■□□□ 1.12
PDLIM7-213ENST00000505074 WASHC2AQ641Q2 1341 aa22.04■■□□□ 1.12
PDLIM7-213ENST00000505074 EIF4G2P78344 907 aaKnown RBP eCLIP22.03■■□□□ 1.12
PDLIM7-213ENST00000505074 ERVV-2B6SEH9 535 aa22.02■■□□□ 1.12
PDLIM7-213ENST00000505074 ZC3H4Q9UPT8 1303 aaKnown RBP22.02■■□□□ 1.12
PDLIM7-213ENST00000505074 TNNT2P45379 298 aaPredicted RBP22.01■■□□□ 1.11
PDLIM7-213ENST00000505074 HSPA5P11021 654 aaKnown RBP22■■□□□ 1.11
PDLIM7-213ENST00000505074 CHRNA5P30532 468 aa22■■□□□ 1.11
PDLIM7-213ENST00000505074 PCNTO95613 3336 aa22■■□□□ 1.11
PDLIM7-213ENST00000505074 CCDC88AQ3V6T2 1871 aa21.99■■□□□ 1.11
PDLIM7-213ENST00000505074 HSP90AB1P08238 724 aaKnown RBP21.99■■□□□ 1.11
PDLIM7-213ENST00000505074 VEGFAP15692 232 aaPredicted RBP21.99■■□□□ 1.11
PDLIM7-213ENST00000505074 DDR1Q08345 913 aa21.98■■□□□ 1.11
PDLIM7-213ENST00000505074 FKBP8Q14318 412 aa21.98■■□□□ 1.11
PDLIM7-213ENST00000505074 SRP68Q9UHB9 627 aaKnown RBP21.98■■□□□ 1.11
PDLIM7-213ENST00000505074 USP42Q9H9J4 1324 aaKnown RBP21.98■■□□□ 1.11
PDLIM7-213ENST00000505074 GLTPD2A6NH11 291 aa21.96■■□□□ 1.11
PDLIM7-213ENST00000505074 CRKLP46109 303 aaKnown RBP21.95■■□□□ 1.1
PDLIM7-213ENST00000505074 CABP4P57796 275 aa21.95■■□□□ 1.1
PDLIM7-213ENST00000505074 RASSF7Q02833 373 aa21.95■■□□□ 1.1
PDLIM7-213ENST00000505074 KDM6AO15550 1401 aaPredicted RBP21.95■■□□□ 1.1
PDLIM7-213ENST00000505074 TIAM2Q8IVF5 1701 aa21.94■■□□□ 1.1
PDLIM7-213ENST00000505074 LMNB1P20700 586 aa21.94■■□□□ 1.1
PDLIM7-213ENST00000505074 POLKQ9UBT6 870 aa21.94■■□□□ 1.1
PDLIM7-213ENST00000505074 POLRMTO00411 1230 aaKnown RBP21.93■■□□□ 1.1
PDLIM7-213ENST00000505074 PTCD1O75127 700 aaKnown RBP21.93■■□□□ 1.1
PDLIM7-213ENST00000505074 PANK3Q9H999 370 aa21.93■■□□□ 1.1
PDLIM7-213ENST00000505074 AFDNP55196 1824 aaKnown RBP21.92■■□□□ 1.1
PDLIM7-213ENST00000505074 DLEC1Q9Y238 1755 aa21.92■■□□□ 1.1
PDLIM7-213ENST00000505074 EIF4A2Q14240 407 aaKnown RBP21.92■■□□□ 1.1
PDLIM7-213ENST00000505074 PLEKHO1Q53GL0 409 aaPredicted RBP21.92■■□□□ 1.1
PDLIM7-213ENST00000505074 TJP1Q07157 1748 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms