RNA–Protein interactions for RNA: ENST00000504786.5

GYPA-204, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-204ENST00000504786 POM121CA8CG34 1229 aa8.33□□□□□ -1.08
GYPA-204ENST00000504786 STAU1O95793 577 aaKnown RBP8.33□□□□□ -1.08
GYPA-204ENST00000504786 INHAP05111 366 aa8.32□□□□□ -1.08
GYPA-204ENST00000504786 PHKA2P46019 1235 aa8.32□□□□□ -1.08
GYPA-204ENST00000504786 GDF10P55107 478 aa8.32□□□□□ -1.08
GYPA-204ENST00000504786 TLR1Q15399 786 aa8.32□□□□□ -1.08
GYPA-204ENST00000504786 RNFT1Q5M7Z0 435 aa8.32□□□□□ -1.08
GYPA-204ENST00000504786 HDGFL1Q5TGJ6 251 aa8.32□□□□□ -1.08
GYPA-204ENST00000504786 FOXR1Q6PIV2 292 aa8.32□□□□□ -1.08
GYPA-204ENST00000504786 NOD1Q9Y239 953 aa8.32□□□□□ -1.08
GYPA-204ENST00000504786 F11P03951 625 aa8.31□□□□□ -1.08
GYPA-204ENST00000504786 SCNN1DP51172 638 aa8.31□□□□□ -1.08
GYPA-204ENST00000504786 DBN1Q16643 649 aa8.31□□□□□ -1.08
GYPA-204ENST00000504786 CLUAP1Q96AJ1 413 aa8.31□□□□□ -1.08
GYPA-204ENST00000504786 ZNF837Q96EG3 531 aaPredicted RBP8.31□□□□□ -1.08
GYPA-204ENST00000504786 C4orf17Q53FE4 359 aa8.3□□□□□ -1.08
GYPA-204ENST00000504786 PPARGC1BQ86YN6 1023 aaKnown RBP8.3□□□□□ -1.08
GYPA-204ENST00000504786 ADAMTS19Q8TE59 1207 aa8.3□□□□□ -1.08
GYPA-204ENST00000504786 USP17L5A8MUK1 530 aa8.29□□□□□ -1.08
GYPA-204ENST00000504786 NCOA4Q13772 614 aa8.29□□□□□ -1.08
GYPA-204ENST00000504786 PROSER2Q86WR7 435 aaPredicted RBP8.29□□□□□ -1.08
GYPA-204ENST00000504786 RHBDD1Q8TEB9 315 aa8.29□□□□□ -1.08
GYPA-204ENST00000504786 PCDHGA11Q9Y5H2 935 aa8.29□□□□□ -1.08
GYPA-204ENST00000504786 A0A1B0GTH6 734 aa8.28□□□□□ -1.08
GYPA-204ENST00000504786 SMTNP53814 917 aa8.28□□□□□ -1.08
GYPA-204ENST00000504786 DEPDC4Q8N2C3 294 aa8.28□□□□□ -1.08
GYPA-204ENST00000504786 GTPBP3Q969Y2 492 aaKnown RBP8.28□□□□□ -1.08
GYPA-204ENST00000504786 NUCKS1Q9H1E3 243 aaKnown RBP8.28□□□□□ -1.08
GYPA-204ENST00000504786 GPAMQ9HCL2 828 aa8.28□□□□□ -1.08
GYPA-204ENST00000504786 SERTAD1Q9UHV2 236 aa8.28□□□□□ -1.08
GYPA-204ENST00000504786 TMEM229AB2RXF0 380 aa8.27□□□□□ -1.09
GYPA-204ENST00000504786 GTF2IP78347 998 aa8.27□□□□□ -1.09
GYPA-204ENST00000504786 PSME1Q06323 249 aa8.27□□□□□ -1.09
GYPA-204ENST00000504786 FNBP4Q8N3X1 1017 aaPredicted RBP8.27□□□□□ -1.09
GYPA-204ENST00000504786 TRERF1Q96PN7 1200 aa8.27□□□□□ -1.09
GYPA-204ENST00000504786 GPR25O00155 361 aa8.26□□□□□ -1.09
GYPA-204ENST00000504786 BACH1O14867 736 aa8.26□□□□□ -1.09
GYPA-204ENST00000504786 SLURP2P0DP57 97 aa8.26□□□□□ -1.09
GYPA-204ENST00000504786 CSB-PGBD3P0DP91 1061 aa8.26□□□□□ -1.09
GYPA-204ENST00000504786 GAS6Q14393 721 aa8.26□□□□□ -1.09
GYPA-204ENST00000504786 TRIM50Q86XT4 487 aa8.26□□□□□ -1.09
GYPA-204ENST00000504786 PGBD3Q8N328 593 aa8.26□□□□□ -1.09
GYPA-204ENST00000504786 SLC4A9Q96Q91 983 aa8.26□□□□□ -1.09
GYPA-204ENST00000504786 ZMYND15Q9H091 742 aa8.26□□□□□ -1.09
GYPA-204ENST00000504786 A6NJR5 290 aa8.25□□□□□ -1.09
GYPA-204ENST00000504786 ATP9BO43861 1147 aa8.25□□□□□ -1.09
GYPA-204ENST00000504786 MSX1P28360 303 aa8.25□□□□□ -1.09
GYPA-204ENST00000504786 SRSF11Q05519 484 aaKnown RBP8.25□□□□□ -1.09
GYPA-204ENST00000504786 TBC1D9Q6ZT07 1266 aa8.25□□□□□ -1.09
GYPA-204ENST00000504786 PLEKHM2Q8IWE5 1019 aa8.25□□□□□ -1.09
GYPA-204ENST00000504786 UCN2Q96RP3 112 aa8.25□□□□□ -1.09
GYPA-204ENST00000504786 NIFKQ9BYG3 293 aaKnown RBP8.25□□□□□ -1.09
GYPA-204ENST00000504786 USP17L3A6NCW0 530 aa8.24□□□□□ -1.09
GYPA-204ENST00000504786 USP17L4A6NCW7 530 aa8.24□□□□□ -1.09
GYPA-204ENST00000504786 A6NJY4 79 aa8.24□□□□□ -1.09
GYPA-204ENST00000504786 CDK2AP1O14519 115 aa8.24□□□□□ -1.09
GYPA-204ENST00000504786 ADAMTS2O95450 1211 aa8.24□□□□□ -1.09
GYPA-204ENST00000504786 PLA2G4AP47712 749 aa8.24□□□□□ -1.09
GYPA-204ENST00000504786 USP17L2Q6R6M4 530 aa8.24□□□□□ -1.09
GYPA-204ENST00000504786 USP17L1Q7RTZ2 530 aa8.24□□□□□ -1.09
GYPA-204ENST00000504786 MBIPQ9NS73 344 aa8.24□□□□□ -1.09
GYPA-204ENST00000504786 ATP1A2P50993 1020 aa8.23□□□□□ -1.09
GYPA-204ENST00000504786 LBRQ14739 615 aaKnown RBP8.23□□□□□ -1.09
GYPA-204ENST00000504786 ZNF385CQ66K41 422 aaPredicted RBP8.23□□□□□ -1.09
GYPA-204ENST00000504786 SVOPQ8N4V2 548 aa8.23□□□□□ -1.09
GYPA-204ENST00000504786 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.23□□□□□ -1.09
GYPA-204ENST00000504786 GLMNQ92990 594 aa8.23□□□□□ -1.09
GYPA-204ENST00000504786 AIDAQ96BJ3 306 aa8.23□□□□□ -1.09
GYPA-204ENST00000504786 RUBCNLQ9H714 662 aa8.23□□□□□ -1.09
GYPA-204ENST00000504786 MTFR1Q15390 333 aa8.22□□□□□ -1.09
GYPA-204ENST00000504786 EFHC2Q5JST6 749 aa8.22□□□□□ -1.09
GYPA-204ENST00000504786 WHAMMQ8TF30 809 aa8.22□□□□□ -1.09
GYPA-204ENST00000504786 ZNF358Q9NW07 568 aa8.22□□□□□ -1.09
GYPA-204ENST00000504786 MX2P20592 715 aa8.21□□□□□ -1.1
GYPA-204ENST00000504786 C1orf216Q8TAB5 229 aa8.21□□□□□ -1.1
GYPA-204ENST00000504786 CFHR5Q9BXR6 569 aa8.21□□□□□ -1.1
GYPA-204ENST00000504786 CABP1Q9NZU7 370 aa8.21□□□□□ -1.1
GYPA-204ENST00000504786 MKRN1Q9UHC7 482 aaKnown RBP8.21□□□□□ -1.1
GYPA-204ENST00000504786 NSFL1CQ9UNZ2 370 aaKnown RBP8.21□□□□□ -1.1
GYPA-204ENST00000504786 PHF24Q9UPV7 400 aa8.21□□□□□ -1.1
GYPA-204ENST00000504786 IGF1RP08069 1367 aa8.21□□□□□ -1.1
GYPA-204ENST00000504786 ZBTB7BO15156 539 aaPredicted RBP8.2□□□□□ -1.1
GYPA-204ENST00000504786 THBS1P07996 1170 aa8.2□□□□□ -1.1
GYPA-204ENST00000504786 TPCN2Q8NHX9 752 aa8.2□□□□□ -1.1
GYPA-204ENST00000504786 CALR3Q96L12 384 aaKnown RBP8.2□□□□□ -1.1
GYPA-204ENST00000504786 CRISPLD1Q9H336 500 aa8.2□□□□□ -1.1
GYPA-204ENST00000504786 TFIP11Q9UBB9 837 aaKnown RBP8.2□□□□□ -1.1
GYPA-204ENST00000504786 ADAMTS8Q9UP79 889 aa8.2□□□□□ -1.1
GYPA-204ENST00000504786 IQSEC3Q9UPP2 1182 aaPredicted RBP8.2□□□□□ -1.1
GYPA-204ENST00000504786 MAP3K10Q02779 954 aa8.19□□□□□ -1.1
GYPA-204ENST00000504786 NBPF1Q3BBV0 1214 aa8.19□□□□□ -1.1
GYPA-204ENST00000504786 CCDC102BQ68D86 513 aa8.19□□□□□ -1.1
GYPA-204ENST00000504786 LYPD4Q6UWN0 246 aa8.19□□□□□ -1.1
GYPA-204ENST00000504786 DNAAF2Q9NVR5 837 aaKnown RBP8.19□□□□□ -1.1
GYPA-204ENST00000504786 SCHIP1Q9P0W5 487 aaPredicted RBP8.19□□□□□ -1.1
GYPA-204ENST00000504786 TATP17735 454 aaPredicted RBP8.18□□□□□ -1.1
GYPA-204ENST00000504786 LARGE2Q8N3Y3 721 aa8.18□□□□□ -1.1
GYPA-204ENST00000504786 OGFOD1Q8N543 542 aa8.18□□□□□ -1.1
GYPA-204ENST00000504786 RBM19Q9Y4C8 960 aaKnown RBP8.18□□□□□ -1.1
GYPA-204ENST00000504786 USP3Q9Y6I4 520 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms