RNA–Protein interactions for RNA: ENST00000504782.5

RNF4-206, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-206ENST00000504782 AK7Q96M32 723 aa17.45■□□□□ 0.38
RNF4-206ENST00000504782 SLC4A9Q96Q91 983 aa17.45■□□□□ 0.38
RNF4-206ENST00000504782 ATP6V1AP38606 617 aa17.44■□□□□ 0.38
RNF4-206ENST00000504782 VIRMAQ69YN4 1812 aaKnown RBP17.44■□□□□ 0.38
RNF4-206ENST00000504782 PLEKHG2Q9H7P9 1386 aa17.43■□□□□ 0.38
RNF4-206ENST00000504782 DCAF5Q96JK2 942 aa17.43■□□□□ 0.38
RNF4-206ENST00000504782 SCN11AQ9UI33 1791 aa17.43■□□□□ 0.38
RNF4-206ENST00000504782 KDRP35968 1356 aa17.42■□□□□ 0.38
RNF4-206ENST00000504782 COL5A3P25940 1745 aaPredicted RBP17.42■□□□□ 0.38
RNF4-206ENST00000504782 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.42■□□□□ 0.38
RNF4-206ENST00000504782 ERVV-2B6SEH9 535 aa17.42■□□□□ 0.38
RNF4-206ENST00000504782 GPR162Q16538 588 aa17.41■□□□□ 0.38
RNF4-206ENST00000504782 AMOTQ4VCS5 1084 aa17.41■□□□□ 0.38
RNF4-206ENST00000504782 ZNF831Q5JPB2 1677 aa17.4■□□□□ 0.38
RNF4-206ENST00000504782 GNPATO15228 680 aa17.4■□□□□ 0.38
RNF4-206ENST00000504782 HMOX1P09601 288 aa17.4■□□□□ 0.38
RNF4-206ENST00000504782 PELP1Q8IZL8 1130 aaKnown RBP17.4■□□□□ 0.38
RNF4-206ENST00000504782 FLAD1Q8NFF5 587 aa17.4■□□□□ 0.38
RNF4-206ENST00000504782 RBM42Q9BTD8 480 aaKnown RBP17.4■□□□□ 0.38
RNF4-206ENST00000504782 MYH14Q7Z406 1995 aaKnown RBP17.4■□□□□ 0.38
RNF4-206ENST00000504782 HSP90AB1P08238 724 aaKnown RBP17.39■□□□□ 0.37
RNF4-206ENST00000504782 CABP4P57796 275 aa17.39■□□□□ 0.37
RNF4-206ENST00000504782 NFATC2IPQ8NCF5 419 aa17.39■□□□□ 0.37
RNF4-206ENST00000504782 YBX3P16989 372 aaKnown RBP eCLIP17.38■□□□□ 0.37
RNF4-206ENST00000504782 SSFA2P28290 1259 aa17.38■□□□□ 0.37
RNF4-206ENST00000504782 C1orf141Q5JVX7 400 aa17.38■□□□□ 0.37
RNF4-206ENST00000504782 LGR6Q9HBX8 967 aa17.37■□□□□ 0.37
RNF4-206ENST00000504782 TJP1Q07157 1748 aa17.37■□□□□ 0.37
RNF4-206ENST00000504782 COL3A1P02461 1466 aaPredicted RBP17.37■□□□□ 0.37
RNF4-206ENST00000504782 ZNF784Q8NCA9 323 aaPredicted RBP17.36■□□□□ 0.37
RNF4-206ENST00000504782 GOLGB1Q14789 3259 aaKnown RBP17.36■□□□□ 0.37
RNF4-206ENST00000504782 DIAPH1O60610 1272 aaKnown RBP17.35■□□□□ 0.37
RNF4-206ENST00000504782 PTCD1O75127 700 aaKnown RBP17.35■□□□□ 0.37
RNF4-206ENST00000504782 HMGB2P26583 209 aaKnown RBP17.35■□□□□ 0.37
RNF4-206ENST00000504782 C4AP0C0L4 1744 aa17.35■□□□□ 0.37
RNF4-206ENST00000504782 MTHFSDQ2M296 383 aaKnown RBP17.34■□□□□ 0.37
RNF4-206ENST00000504782 NPC1L1Q9UHC9 1359 aa17.33■□□□□ 0.36
RNF4-206ENST00000504782 AKAP4Q5JQC9 854 aa17.33■□□□□ 0.36
RNF4-206ENST00000504782 WWC3Q9ULE0 1092 aa17.33■□□□□ 0.36
RNF4-206ENST00000504782 CD2APQ9Y5K6 639 aa17.33■□□□□ 0.36
RNF4-206ENST00000504782 ADAMTS7Q9UKP4 1686 aa17.32■□□□□ 0.36
RNF4-206ENST00000504782 ARHGEF1Q92888 912 aaKnown RBP17.32■□□□□ 0.36
RNF4-206ENST00000504782 RTCBQ9Y3I0 505 aaKnown RBP17.32■□□□□ 0.36
RNF4-206ENST00000504782 RNMTO43148 476 aaKnown RBP17.31■□□□□ 0.36
RNF4-206ENST00000504782 TRAPPC3LQ5T215 181 aa17.31■□□□□ 0.36
RNF4-206ENST00000504782 RC3H1Q5TC82 1133 aaKnown RBP17.31■□□□□ 0.36
RNF4-206ENST00000504782 SLC52A2Q9HAB3 445 aa17.31■□□□□ 0.36
RNF4-206ENST00000504782 CICQ96RK0 1608 aaPredicted RBP17.31■□□□□ 0.36
RNF4-206ENST00000504782 KIAA1551Q9HCM1 1747 aa17.3■□□□□ 0.36
RNF4-206ENST00000504782 CNTNAP4Q9C0A0 1308 aa17.3■□□□□ 0.36
RNF4-206ENST00000504782 RPS6KA4O75676 772 aa17.3■□□□□ 0.36
RNF4-206ENST00000504782 SLC39A6Q13433 755 aa17.3■□□□□ 0.36
RNF4-206ENST00000504782 N4BP2Q86UW6 1770 aaPredicted RBP17.3■□□□□ 0.36
RNF4-206ENST00000504782 MRC1P22897 1456 aa17.3■□□□□ 0.36
RNF4-206ENST00000504782 KIF13BQ9NQT8 1826 aa17.29■□□□□ 0.36
RNF4-206ENST00000504782 U2SURPO15042 1029 aaKnown RBP17.29■□□□□ 0.36
RNF4-206ENST00000504782 MMP10P09238 476 aa17.29■□□□□ 0.36
RNF4-206ENST00000504782 CRKLP46109 303 aaKnown RBP17.29■□□□□ 0.36
RNF4-206ENST00000504782 KCPQ6ZWJ8 1503 aa17.27■□□□□ 0.36
RNF4-206ENST00000504782 GYS1P13807 737 aa17.27■□□□□ 0.36
RNF4-206ENST00000504782 INTS5Q6P9B9 1019 aaKnown RBP17.27■□□□□ 0.36
RNF4-206ENST00000504782 DNAJC10Q8IXB1 793 aa17.27■□□□□ 0.36
RNF4-206ENST00000504782 SRP68Q9UHB9 627 aaKnown RBP17.27■□□□□ 0.36
RNF4-206ENST00000504782 SIPA1L3O60292 1781 aaPredicted RBP17.26■□□□□ 0.35
RNF4-206ENST00000504782 UBR2Q8IWV8 1755 aa17.26■□□□□ 0.35
RNF4-206ENST00000504782 RFC4P35249 363 aa17.25■□□□□ 0.35
RNF4-206ENST00000504782 GRIN3BO60391 1043 aa17.24■□□□□ 0.35
RNF4-206ENST00000504782 ADRA2BP18089 450 aa17.24■□□□□ 0.35
RNF4-206ENST00000504782 IL17REQ8NFR9 667 aa17.24■□□□□ 0.35
RNF4-206ENST00000504782 PHACTR3Q96KR7 559 aa17.24■□□□□ 0.35
RNF4-206ENST00000504782 PPP2R1AP30153 589 aa17.23■□□□□ 0.35
RNF4-206ENST00000504782 NLGN1Q8N2Q7 840 aa17.23■□□□□ 0.35
RNF4-206ENST00000504782 PXDNLA1KZ92 1463 aa17.23■□□□□ 0.35
RNF4-206ENST00000504782 CYP19A1P11511 503 aaPredicted RBP17.22■□□□□ 0.35
RNF4-206ENST00000504782 FKBP8Q14318 412 aa17.22■□□□□ 0.35
RNF4-206ENST00000504782 BRCA1P38398 1863 aaKnown RBP17.21■□□□□ 0.35
RNF4-206ENST00000504782 A0A0G2JLW4 131 aa17.21■□□□□ 0.35
RNF4-206ENST00000504782 RSPH6AQ9H0K4 717 aa17.21■□□□□ 0.35
RNF4-206ENST00000504782 CCDC87Q9NVE4 849 aa17.21■□□□□ 0.35
RNF4-206ENST00000504782 C10orf71Q711Q0 1435 aa17.21■□□□□ 0.34
RNF4-206ENST00000504782 USP42Q9H9J4 1324 aaKnown RBP17.21■□□□□ 0.34
RNF4-206ENST00000504782 PRKAR2BP31323 418 aa17.2■□□□□ 0.34
RNF4-206ENST00000504782 DDR1Q08345 913 aa17.2■□□□□ 0.34
RNF4-206ENST00000504782 SOS1Q07889 1333 aaPredicted RBP17.2■□□□□ 0.34
RNF4-206ENST00000504782 GNAT3A8MTJ3 354 aa17.19■□□□□ 0.34
RNF4-206ENST00000504782 ZBTB1Q9Y2K1 713 aa17.19■□□□□ 0.34
RNF4-206ENST00000504782 DPEP1P16444 411 aa17.18■□□□□ 0.34
RNF4-206ENST00000504782 USPL1Q5W0Q7 1092 aa17.18■□□□□ 0.34
RNF4-206ENST00000504782 GAS2L2Q8NHY3 880 aa17.18■□□□□ 0.34
RNF4-206ENST00000504782 PARP3Q9Y6F1 533 aa17.18■□□□□ 0.34
RNF4-206ENST00000504782 AFDNP55196 1824 aaKnown RBP17.18■□□□□ 0.34
RNF4-206ENST00000504782 KCNQ3O43525 872 aa17.17■□□□□ 0.34
RNF4-206ENST00000504782 ZNF496Q96IT1 587 aaPredicted RBP17.17■□□□□ 0.34
RNF4-206ENST00000504782 CFAP53Q96M91 514 aa17.17■□□□□ 0.34
RNF4-206ENST00000504782 ATP10DQ9P241 1426 aa17.16■□□□□ 0.34
RNF4-206ENST00000504782 U2AF1L5P0DN76 240 aaPredicted RBP17.16■□□□□ 0.34
RNF4-206ENST00000504782 KCNA3P22001 575 aa17.16■□□□□ 0.34
RNF4-206ENST00000504782 TM4SF1P30408 202 aa17.16■□□□□ 0.34
RNF4-206ENST00000504782 TGFB2P61812 414 aa17.16■□□□□ 0.34
RNF4-206ENST00000504782 U2AF1Q01081 240 aaKnown RBP eCLIP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms