RNA–Protein interactions for RNA: ENST00000504531.2

CASC9-201, Transcript of cancer susceptibility 9, humanhuman

TSL 1 (best) BASIC

Gene CASC9, Length 1,164 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-201ENST00000504531 KDM5AP29375 1690 aaKnown RBP11.62□□□□□ -0.55
CASC9-201ENST00000504531 ADGRB3O60242 1522 aa11.62□□□□□ -0.55
CASC9-201ENST00000504531 HLA-CQ95604 372 aa11.62□□□□□ -0.55
CASC9-201ENST00000504531 ARHGAP31Q2M1Z3 1444 aa11.61□□□□□ -0.55
CASC9-201ENST00000504531 RRP1P56182 461 aaKnown RBP11.61□□□□□ -0.55
CASC9-201ENST00000504531 FAM117AQ9C073 453 aa11.61□□□□□ -0.55
CASC9-201ENST00000504531 SLC6A16Q9GZN6 736 aa11.61□□□□□ -0.55
CASC9-201ENST00000504531 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.61□□□□□ -0.55
CASC9-201ENST00000504531 RCAN3Q9UKA8 241 aa11.61□□□□□ -0.55
CASC9-201ENST00000504531 FRMPD1Q5SYB0 1578 aa11.61□□□□□ -0.55
CASC9-201ENST00000504531 NDUFV2P19404 249 aa11.6□□□□□ -0.55
CASC9-201ENST00000504531 MSS51Q4VC12 460 aa11.6□□□□□ -0.55
CASC9-201ENST00000504531 PPP1R18Q6NYC8 613 aa11.6□□□□□ -0.55
CASC9-201ENST00000504531 RSBN1LQ6PCB5 846 aaPredicted RBP11.6□□□□□ -0.55
CASC9-201ENST00000504531 RNF19BQ6ZMZ0 732 aa11.6□□□□□ -0.55
CASC9-201ENST00000504531 SPTLC1O15269 473 aa11.59□□□□□ -0.55
CASC9-201ENST00000504531 RGS20O76081 388 aa11.59□□□□□ -0.55
CASC9-201ENST00000504531 IRX6P78412 446 aaPredicted RBP11.59□□□□□ -0.55
CASC9-201ENST00000504531 GUCA2AQ02747 115 aa11.59□□□□□ -0.55
CASC9-201ENST00000504531 MYSM1Q5VVJ2 828 aa11.59□□□□□ -0.55
CASC9-201ENST00000504531 RIC3Q7Z5B4 369 aa11.59□□□□□ -0.55
CASC9-201ENST00000504531 CCDC136Q96JN2 1154 aa11.59□□□□□ -0.55
CASC9-201ENST00000504531 USB1Q9BQ65 265 aaKnown RBP11.59□□□□□ -0.55
CASC9-201ENST00000504531 ARHGEF40Q8TER5 1519 aa11.59□□□□□ -0.55
CASC9-201ENST00000504531 ZFYVE9O95405 1425 aa11.59□□□□□ -0.55
CASC9-201ENST00000504531 MYOM1P52179 1685 aa11.59□□□□□ -0.55
CASC9-201ENST00000504531 ABCA6Q8N139 1617 aa11.58□□□□□ -0.56
CASC9-201ENST00000504531 PPP2R1AP30153 589 aa11.58□□□□□ -0.56
CASC9-201ENST00000504531 NOS1P29475 1434 aa11.58□□□□□ -0.56
CASC9-201ENST00000504531 ZC3H13Q5T200 1668 aaKnown RBP11.57□□□□□ -0.56
CASC9-201ENST00000504531 SPDYE5A6NIY4 337 aa11.57□□□□□ -0.56
CASC9-201ENST00000504531 UBAP1LF5GYI3 381 aa11.57□□□□□ -0.56
CASC9-201ENST00000504531 S1PR4O95977 384 aa11.57□□□□□ -0.56
CASC9-201ENST00000504531 TUSC1Q2TAM9 212 aa11.57□□□□□ -0.56
CASC9-201ENST00000504531 B4GALNT3Q6L9W6 998 aa11.57□□□□□ -0.56
CASC9-201ENST00000504531 C14orf93Q9H972 538 aaKnown RBP11.57□□□□□ -0.56
CASC9-201ENST00000504531 PCDHGC3Q9UN70 934 aa11.57□□□□□ -0.56
CASC9-201ENST00000504531 ZNF521Q96K83 1311 aa11.57□□□□□ -0.56
CASC9-201ENST00000504531 ERVK-7P63135 1459 aa11.57□□□□□ -0.56
CASC9-201ENST00000504531 C6orf229H3BNL8 230 aa11.56□□□□□ -0.56
CASC9-201ENST00000504531 TCERG1O14776 1098 aaKnown RBP11.56□□□□□ -0.56
CASC9-201ENST00000504531 SH3D19Q5HYK7 790 aa11.56□□□□□ -0.56
CASC9-201ENST00000504531 RETREG3Q86VR2 466 aa11.56□□□□□ -0.56
CASC9-201ENST00000504531 PPLO60437 1756 aa11.56□□□□□ -0.56
CASC9-201ENST00000504531 USP32Q8NFA0 1604 aa11.56□□□□□ -0.56
CASC9-201ENST00000504531 CLK2P49760 499 aaKnown RBP11.55□□□□□ -0.56
CASC9-201ENST00000504531 CC2D1BQ5T0F9 858 aaKnown RBP11.55□□□□□ -0.56
CASC9-201ENST00000504531 PRPF38BQ5VTL8 546 aaKnown RBP11.55□□□□□ -0.56
CASC9-201ENST00000504531 FAM160A2Q8N612 972 aaPredicted RBP11.55□□□□□ -0.56
CASC9-201ENST00000504531 PIK3C2BO00750 1634 aa11.55□□□□□ -0.56
CASC9-201ENST00000504531 POLR3AO14802 1390 aaPredicted RBP11.54□□□□□ -0.56
CASC9-201ENST00000504531 NPATQ14207 1427 aa11.54□□□□□ -0.56
CASC9-201ENST00000504531 PLEKHG3A1L390 1219 aa11.54□□□□□ -0.56
CASC9-201ENST00000504531 MTMR2Q13614 643 aa11.54□□□□□ -0.56
CASC9-201ENST00000504531 WDR43Q15061 677 aaKnown RBP eCLIP11.54□□□□□ -0.56
CASC9-201ENST00000504531 TRMT2AQ8IZ69 625 aaKnown RBP11.54□□□□□ -0.56
CASC9-201ENST00000504531 ABCC3O15438 1527 aa11.54□□□□□ -0.56
CASC9-201ENST00000504531 SKIV2LQ15477 1246 aaKnown RBP11.53□□□□□ -0.56
CASC9-201ENST00000504531 ANKLE1Q8NAG6 615 aa11.53□□□□□ -0.56
CASC9-201ENST00000504531 ZBTB3Q9H5J0 574 aa11.53□□□□□ -0.56
CASC9-201ENST00000504531 SLC52A1Q9NWF4 448 aa11.53□□□□□ -0.56
CASC9-201ENST00000504531 ADAMTS8Q9UP79 889 aa11.53□□□□□ -0.56
CASC9-201ENST00000504531 ADGRB1O14514 1584 aa11.53□□□□□ -0.56
CASC9-201ENST00000504531 NINLQ9Y2I6 1382 aa11.53□□□□□ -0.56
CASC9-201ENST00000504531 RNF223E7ERA6 249 aa11.52□□□□□ -0.57
CASC9-201ENST00000504531 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.52□□□□□ -0.57
CASC9-201ENST00000504531 ADGRF5Q8IZF2 1346 aa11.52□□□□□ -0.57
CASC9-201ENST00000504531 CENPJQ9HC77 1338 aaPredicted RBP11.52□□□□□ -0.57
CASC9-201ENST00000504531 MROH2AA6NES4 1674 aa11.52□□□□□ -0.57
CASC9-201ENST00000504531 NSD2O96028 1365 aa11.52□□□□□ -0.57
CASC9-201ENST00000504531 RICTORQ6R327 1708 aa11.52□□□□□ -0.57
CASC9-201ENST00000504531 MMP16P51512 607 aa11.51□□□□□ -0.57
CASC9-201ENST00000504531 CFAP70Q5T0N1 1121 aa11.51□□□□□ -0.57
CASC9-201ENST00000504531 SYMPKQ92797 1274 aaKnown RBP11.51□□□□□ -0.57
CASC9-201ENST00000504531 GOPCQ9HD26 462 aa11.51□□□□□ -0.57
CASC9-201ENST00000504531 LIMD1Q9UGP4 676 aa11.51□□□□□ -0.57
CASC9-201ENST00000504531 CAMSAP1Q5T5Y3 1602 aa11.5□□□□□ -0.57
CASC9-201ENST00000504531 AAMPQ13685 434 aa11.5□□□□□ -0.57
CASC9-201ENST00000504531 POLR3EQ9NVU0 708 aa11.5□□□□□ -0.57
CASC9-201ENST00000504531 PCDHB15Q9Y5E8 787 aa11.5□□□□□ -0.57
CASC9-201ENST00000504531 PIP4K2BP78356 416 aa11.49□□□□□ -0.57
CASC9-201ENST00000504531 SLFN5Q08AF3 891 aa11.49□□□□□ -0.57
CASC9-201ENST00000504531 DUSP27Q5VZP5 1158 aa11.49□□□□□ -0.57
CASC9-201ENST00000504531 IL27Q8NEV9 243 aa11.49□□□□□ -0.57
CASC9-201ENST00000504531 REREQ9P2R6 1566 aa11.49□□□□□ -0.57
CASC9-201ENST00000504531 FER1L4A9Z1Z3 1794 aa11.49□□□□□ -0.57
CASC9-201ENST00000504531 DXOO77932 396 aaKnown RBP11.48□□□□□ -0.57
CASC9-201ENST00000504531 CSPP1Q1MSJ5 1256 aa11.48□□□□□ -0.57
CASC9-201ENST00000504531 PRDM9Q9NQV7 894 aa11.48□□□□□ -0.57
CASC9-201ENST00000504531 DIP2CQ9Y2E4 1556 aa11.48□□□□□ -0.57
CASC9-201ENST00000504531 SPATA31D1Q6ZQQ2 1576 aa11.47□□□□□ -0.57
CASC9-201ENST00000504531 UGGT1Q9NYU2 1555 aa11.47□□□□□ -0.57
CASC9-201ENST00000504531 ZNF335Q9H4Z2 1342 aaPredicted RBP11.47□□□□□ -0.57
CASC9-201ENST00000504531 NUTM2BA6NNL0 878 aaPredicted RBP11.47□□□□□ -0.57
CASC9-201ENST00000504531 NUTM2EB1AL46 878 aaPredicted RBP11.47□□□□□ -0.57
CASC9-201ENST00000504531 E9PSI1 815 aa11.47□□□□□ -0.57
CASC9-201ENST00000504531 JUNDP17535 347 aa11.47□□□□□ -0.57
CASC9-201ENST00000504531 NUTM2DQ5VT03 806 aaPredicted RBP11.47□□□□□ -0.57
CASC9-201ENST00000504531 NUTM2AQ8IVF1 878 aaPredicted RBP11.47□□□□□ -0.57
CASC9-201ENST00000504531 PPEF1O14829 653 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms