RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 RNF217Q8TC41 542 aa8.88□□□□□ -0.99
TRAPPC13-205ENST00000504243 ETNK1Q9HBU6 452 aa8.88□□□□□ -0.99
TRAPPC13-205ENST00000504243 DNMT3LQ9UJW3 386 aa8.88□□□□□ -0.99
TRAPPC13-205ENST00000504243 NOVA2Q9UNW9 492 aaKnown RBP8.88□□□□□ -0.99
TRAPPC13-205ENST00000504243 USTQ9Y2C2 406 aa8.88□□□□□ -0.99
TRAPPC13-205ENST00000504243 SLC27A3Q5K4L6 730 aa8.87□□□□□ -0.99
TRAPPC13-205ENST00000504243 LYSMD3Q7Z3D4 306 aa8.87□□□□□ -0.99
TRAPPC13-205ENST00000504243 DNAAF2Q9NVR5 837 aaKnown RBP8.87□□□□□ -0.99
TRAPPC13-205ENST00000504243 RBM19Q9Y4C8 960 aaKnown RBP8.87□□□□□ -0.99
TRAPPC13-205ENST00000504243 USP17L15C9J2P7 530 aa8.86□□□□□ -0.99
TRAPPC13-205ENST00000504243 USP17L10C9JJH3 530 aa8.86□□□□□ -0.99
TRAPPC13-205ENST00000504243 USP17L13C9JLJ4 530 aa8.86□□□□□ -0.99
TRAPPC13-205ENST00000504243 USP17L12C9JPN9 530 aa8.86□□□□□ -0.99
TRAPPC13-205ENST00000504243 USP17L11C9JVI0 530 aa8.86□□□□□ -0.99
TRAPPC13-205ENST00000504243 USP17L21D6R901 530 aa8.86□□□□□ -0.99
TRAPPC13-205ENST00000504243 USP17L18D6R9N7 530 aa8.86□□□□□ -0.99
TRAPPC13-205ENST00000504243 USP17L22D6RA61 530 aa8.86□□□□□ -0.99
TRAPPC13-205ENST00000504243 USP17L17D6RBQ6 530 aa8.86□□□□□ -0.99
TRAPPC13-205ENST00000504243 USP17L19D6RCP7 530 aa8.86□□□□□ -0.99
TRAPPC13-205ENST00000504243 USP17L20D6RJB6 530 aa8.86□□□□□ -0.99
TRAPPC13-205ENST00000504243 BACH1O14867 736 aa8.86□□□□□ -0.99
TRAPPC13-205ENST00000504243 GTF2E1P29083 439 aaPredicted RBP8.86□□□□□ -0.99
TRAPPC13-205ENST00000504243 SCNN1DP51172 638 aa8.86□□□□□ -0.99
TRAPPC13-205ENST00000504243 CENPCQ03188 943 aa8.86□□□□□ -0.99
TRAPPC13-205ENST00000504243 USP17L24Q0WX57 530 aa8.86□□□□□ -0.99
TRAPPC13-205ENST00000504243 OGFOD1Q8N543 542 aa8.86□□□□□ -0.99
TRAPPC13-205ENST00000504243 ZNF594Q96JF6 807 aaPredicted RBP8.86□□□□□ -0.99
TRAPPC13-205ENST00000504243 HRH3Q9Y5N1 445 aa8.86□□□□□ -0.99
TRAPPC13-205ENST00000504243 SOBPA7XYQ1 873 aa8.85□□□□□ -0.99
TRAPPC13-205ENST00000504243 CLDN10P78369 228 aa8.85□□□□□ -0.99
TRAPPC13-205ENST00000504243 CRTC2Q53ET0 693 aaPredicted RBP8.85□□□□□ -0.99
TRAPPC13-205ENST00000504243 FAM200AQ8TCP9 573 aa8.85□□□□□ -0.99
TRAPPC13-205ENST00000504243 GRIP2Q9C0E4 1043 aa8.85□□□□□ -0.99
TRAPPC13-205ENST00000504243 FAM196BA6NMK8 535 aa8.84□□□□□ -0.99
TRAPPC13-205ENST00000504243 TMEM229AB2RXF0 380 aa8.84□□□□□ -0.99
TRAPPC13-205ENST00000504243 ZBTB7BO15156 539 aaPredicted RBP8.84□□□□□ -0.99
TRAPPC13-205ENST00000504243 CCDC102BQ68D86 513 aa8.84□□□□□ -0.99
TRAPPC13-205ENST00000504243 ZSCAN10Q96SZ4 725 aaPredicted RBP8.84□□□□□ -0.99
TRAPPC13-205ENST00000504243 TLR1Q15399 786 aa8.83□□□□□ -1
TRAPPC13-205ENST00000504243 PRICKLE2Q7Z3G6 844 aa8.83□□□□□ -1
TRAPPC13-205ENST00000504243 SIX5Q8N196 739 aa8.83□□□□□ -1
TRAPPC13-205ENST00000504243 STK32AQ8WU08 396 aa8.83□□□□□ -1
TRAPPC13-205ENST00000504243 SLC4A9Q96Q91 983 aa8.83□□□□□ -1
TRAPPC13-205ENST00000504243 SPATA31C2B4DYI2 1134 aa8.82□□□□□ -1
TRAPPC13-205ENST00000504243 STAU1O95793 577 aaKnown RBP8.82□□□□□ -1
TRAPPC13-205ENST00000504243 SMTNP53814 917 aa8.82□□□□□ -1
TRAPPC13-205ENST00000504243 PTK7Q13308 1070 aa8.82□□□□□ -1
TRAPPC13-205ENST00000504243 ELOAQ14241 798 aaKnown RBP8.82□□□□□ -1
TRAPPC13-205ENST00000504243 WDR44Q5JSH3 913 aa8.82□□□□□ -1
TRAPPC13-205ENST00000504243 TMEM164Q5U3C3 297 aa8.82□□□□□ -1
TRAPPC13-205ENST00000504243 TMEM214Q6NUQ4 689 aaKnown RBP8.82□□□□□ -1
TRAPPC13-205ENST00000504243 ANKMY2Q8IV38 441 aa8.82□□□□□ -1
TRAPPC13-205ENST00000504243 NPAS3Q8IXF0 933 aa8.82□□□□□ -1
TRAPPC13-205ENST00000504243 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.82□□□□□ -1
TRAPPC13-205ENST00000504243 TPCN2Q8NHX9 752 aa8.82□□□□□ -1
TRAPPC13-205ENST00000504243 FHDC1Q9C0D6 1143 aaPredicted RBP8.82□□□□□ -1
TRAPPC13-205ENST00000504243 ZNF358Q9NW07 568 aa8.82□□□□□ -1
TRAPPC13-205ENST00000504243 SERTAD1Q9UHV2 236 aa8.82□□□□□ -1
TRAPPC13-205ENST00000504243 ZMIZ1Q9ULJ6 1067 aa8.82□□□□□ -1
TRAPPC13-205ENST00000504243 PTSQ03393 145 aa8.81□□□□□ -1
TRAPPC13-205ENST00000504243 DPYDQ12882 1025 aa8.81□□□□□ -1
TRAPPC13-205ENST00000504243 GNASQ5JWF2 1037 aa8.81□□□□□ -1
TRAPPC13-205ENST00000504243 NXF1Q9UBU9 619 aaKnown RBP8.81□□□□□ -1
TRAPPC13-205ENST00000504243 KIAA1024Q9UPX6 916 aa8.81□□□□□ -1
TRAPPC13-205ENST00000504243 A6NJY4 79 aa8.8□□□□□ -1
TRAPPC13-205ENST00000504243 TMEM88BA6NKF7 163 aa8.8□□□□□ -1
TRAPPC13-205ENST00000504243 M0R2N6 131 aa8.8□□□□□ -1
TRAPPC13-205ENST00000504243 BRD1O95696 1058 aa8.8□□□□□ -1
TRAPPC13-205ENST00000504243 MTFR1Q15390 333 aa8.8□□□□□ -1
TRAPPC13-205ENST00000504243 TAS1R3Q7RTX0 852 aa8.8□□□□□ -1
TRAPPC13-205ENST00000504243 PPARGC1BQ86YN6 1023 aaKnown RBP8.8□□□□□ -1
TRAPPC13-205ENST00000504243 SEC13P55735 322 aa8.79□□□□□ -1
TRAPPC13-205ENST00000504243 POU4F2Q12837 409 aa8.79□□□□□ -1
TRAPPC13-205ENST00000504243 NBPF10Q6P3W6 841 aaKnown RBP8.79□□□□□ -1
TRAPPC13-205ENST00000504243 NBPF15Q8N660 670 aa8.79□□□□□ -1
TRAPPC13-205ENST00000504243 RHBDD1Q8TEB9 315 aa8.79□□□□□ -1
TRAPPC13-205ENST00000504243 SLC35F4A4IF30 521 aa8.78□□□□□ -1
TRAPPC13-205ENST00000504243 PATL2C9JE40 543 aaKnown RBP8.78□□□□□ -1
TRAPPC13-205ENST00000504243 CDK2AP1O14519 115 aa8.78□□□□□ -1
TRAPPC13-205ENST00000504243 RHOQP17081 205 aa8.78□□□□□ -1
TRAPPC13-205ENST00000504243 B4GALNT3Q6L9W6 998 aa8.78□□□□□ -1
TRAPPC13-205ENST00000504243 ZNF775Q96BV0 537 aaPredicted RBP8.78□□□□□ -1
TRAPPC13-205ENST00000504243 TERTO14746 1132 aaKnown RBP8.77□□□□□ -1.01
TRAPPC13-205ENST00000504243 DKK1O94907 266 aa8.77□□□□□ -1.01
TRAPPC13-205ENST00000504243 CCDC155Q8N6L0 562 aa8.77□□□□□ -1.01
TRAPPC13-205ENST00000504243 SLC16A10Q8TF71 515 aa8.77□□□□□ -1.01
TRAPPC13-205ENST00000504243 HINFPQ9BQA5 517 aa8.77□□□□□ -1.01
TRAPPC13-205ENST00000504243 SFI1A8K8P3 1242 aa8.76□□□□□ -1.01
TRAPPC13-205ENST00000504243 PPFIA3O75145 1194 aa8.76□□□□□ -1.01
TRAPPC13-205ENST00000504243 KCNA1Q09470 495 aa8.76□□□□□ -1.01
TRAPPC13-205ENST00000504243 NIFKQ9BYG3 293 aaKnown RBP8.76□□□□□ -1.01
TRAPPC13-205ENST00000504243 GZF1Q9H116 711 aaPredicted RBP8.76□□□□□ -1.01
TRAPPC13-205ENST00000504243 TIMMDC1Q9NPL8 285 aa8.76□□□□□ -1.01
TRAPPC13-205ENST00000504243 C4orf17Q53FE4 359 aa8.75□□□□□ -1.01
TRAPPC13-205ENST00000504243 SCHIP1Q9P0W5 487 aaPredicted RBP8.75□□□□□ -1.01
TRAPPC13-205ENST00000504243 DYRK1BQ9Y463 629 aa8.75□□□□□ -1.01
TRAPPC13-205ENST00000504243 SENP3-EIF4A1A0A087X0R7 540 aa8.74□□□□□ -1.01
TRAPPC13-205ENST00000504243 H3BM21 787 aa8.74□□□□□ -1.01
TRAPPC13-205ENST00000504243 EPHA4P54764 986 aa8.74□□□□□ -1.01
TRAPPC13-205ENST00000504243 TNS4Q8IZW8 715 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms