RNA–Protein interactions for RNA: ENST00000504211.5

UBE2D3-217, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-217ENST00000504211 CNKSR1Q969H4 720 aa11.38□□□□□ -0.59
UBE2D3-217ENST00000504211 SLC4A9Q96Q91 983 aa11.38□□□□□ -0.59
UBE2D3-217ENST00000504211 PURBQ96QR8 312 aaKnown RBP11.38□□□□□ -0.59
UBE2D3-217ENST00000504211 GPC1P35052 558 aa11.37□□□□□ -0.59
UBE2D3-217ENST00000504211 C6orf118Q5T5N4 469 aa11.37□□□□□ -0.59
UBE2D3-217ENST00000504211 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.37□□□□□ -0.59
UBE2D3-217ENST00000504211 INSM2Q96T92 566 aaPredicted RBP11.37□□□□□ -0.59
UBE2D3-217ENST00000504211 ACIN1Q9UKV3 1341 aaKnown RBP11.36□□□□□ -0.59
UBE2D3-217ENST00000504211 MEN1O00255 615 aa11.36□□□□□ -0.59
UBE2D3-217ENST00000504211 BACH1O14867 736 aa11.36□□□□□ -0.59
UBE2D3-217ENST00000504211 FAM200AQ8TCP9 573 aa11.36□□□□□ -0.59
UBE2D3-217ENST00000504211 STK32AQ8WU08 396 aa11.36□□□□□ -0.59
UBE2D3-217ENST00000504211 ZFP42Q96MM3 310 aa11.36□□□□□ -0.59
UBE2D3-217ENST00000504211 RBM19Q9Y4C8 960 aaKnown RBP11.36□□□□□ -0.59
UBE2D3-217ENST00000504211 SFI1A8K8P3 1242 aa11.35□□□□□ -0.59
UBE2D3-217ENST00000504211 CTSOP43234 321 aaPredicted RBP11.35□□□□□ -0.59
UBE2D3-217ENST00000504211 FOXD4L5Q5VV16 416 aaPredicted RBP11.35□□□□□ -0.59
UBE2D3-217ENST00000504211 NLRP3Q96P20 1036 aa11.35□□□□□ -0.59
UBE2D3-217ENST00000504211 FHDC1Q9C0D6 1143 aaPredicted RBP11.35□□□□□ -0.59
UBE2D3-217ENST00000504211 SOS2Q07890 1332 aaPredicted RBP11.35□□□□□ -0.59
UBE2D3-217ENST00000504211 RNF144AP50876 292 aaPredicted RBP11.34□□□□□ -0.59
UBE2D3-217ENST00000504211 EPHA4P54764 986 aa11.34□□□□□ -0.59
UBE2D3-217ENST00000504211 MTFR1Q15390 333 aa11.34□□□□□ -0.59
UBE2D3-217ENST00000504211 TMEM164Q5U3C3 297 aa11.34□□□□□ -0.59
UBE2D3-217ENST00000504211 SMTNP53814 917 aa11.33□□□□□ -0.6
UBE2D3-217ENST00000504211 FAM69CQ0P6D2 419 aa11.33□□□□□ -0.6
UBE2D3-217ENST00000504211 POLMQ9NP87 494 aaPredicted RBP11.33□□□□□ -0.6
UBE2D3-217ENST00000504211 CSB-PGBD3P0DP91 1061 aa11.32□□□□□ -0.6
UBE2D3-217ENST00000504211 CENPCQ03188 943 aa11.32□□□□□ -0.6
UBE2D3-217ENST00000504211 SWI5Q1ZZU3 235 aa11.32□□□□□ -0.6
UBE2D3-217ENST00000504211 RNF217Q8TC41 542 aa11.32□□□□□ -0.6
UBE2D3-217ENST00000504211 GRIP2Q9C0E4 1043 aa11.32□□□□□ -0.6
UBE2D3-217ENST00000504211 SENP2Q9HC62 589 aa11.32□□□□□ -0.6
UBE2D3-217ENST00000504211 SERTAD1Q9UHV2 236 aa11.32□□□□□ -0.6
UBE2D3-217ENST00000504211 USTQ9Y2C2 406 aa11.32□□□□□ -0.6
UBE2D3-217ENST00000504211 TTLL8A6PVC2 850 aa11.31□□□□□ -0.6
UBE2D3-217ENST00000504211 TLR1Q15399 786 aa11.31□□□□□ -0.6
UBE2D3-217ENST00000504211 RETREG2Q8NC44 543 aa11.31□□□□□ -0.6
UBE2D3-217ENST00000504211 TSEN2Q8NCE0 465 aaKnown RBP11.31□□□□□ -0.6
UBE2D3-217ENST00000504211 TRIM47Q96LD4 638 aa11.31□□□□□ -0.6
UBE2D3-217ENST00000504211 A6NJY4 79 aa11.3□□□□□ -0.6
UBE2D3-217ENST00000504211 TMEM88BA6NKF7 163 aa11.3□□□□□ -0.6
UBE2D3-217ENST00000504211 FOXK2Q01167 660 aa11.3□□□□□ -0.6
UBE2D3-217ENST00000504211 KIFC2Q96AC6 838 aa11.3□□□□□ -0.6
UBE2D3-217ENST00000504211 SCHIP1Q9P0W5 487 aaPredicted RBP11.29□□□□□ -0.6
UBE2D3-217ENST00000504211 IQSEC3Q9UPP2 1182 aaPredicted RBP11.29□□□□□ -0.6
UBE2D3-217ENST00000504211 CDK2AP1O14519 115 aa11.28□□□□□ -0.6
UBE2D3-217ENST00000504211 PPARGC1BQ86YN6 1023 aaKnown RBP11.28□□□□□ -0.6
UBE2D3-217ENST00000504211 TNS4Q8IZW8 715 aa11.28□□□□□ -0.6
UBE2D3-217ENST00000504211 ZSCAN10Q96SZ4 725 aaPredicted RBP11.28□□□□□ -0.6
UBE2D3-217ENST00000504211 GMPR2Q9P2T1 348 aaKnown RBP11.28□□□□□ -0.6
UBE2D3-217ENST00000504211 DNMT3LQ9UJW3 386 aa11.28□□□□□ -0.6
UBE2D3-217ENST00000504211 SLC27A3Q5K4L6 730 aa11.27□□□□□ -0.61
UBE2D3-217ENST00000504211 ZNF295-AS1Q8N0V1 137 aa11.27□□□□□ -0.61
UBE2D3-217ENST00000504211 SPATA31C2B4DYI2 1134 aa11.26□□□□□ -0.61
UBE2D3-217ENST00000504211 NBPF15Q8N660 670 aa11.26□□□□□ -0.61
UBE2D3-217ENST00000504211 CLP1Q92989 425 aaKnown RBP11.26□□□□□ -0.61
UBE2D3-217ENST00000504211 LYSMD3Q7Z3D4 306 aa11.25□□□□□ -0.61
UBE2D3-217ENST00000504211 USP3Q9Y6I4 520 aa11.25□□□□□ -0.61
UBE2D3-217ENST00000504211 PDE4CQ08493 712 aa11.24□□□□□ -0.61
UBE2D3-217ENST00000504211 SLC9A9Q8IVB4 645 aa11.24□□□□□ -0.61
UBE2D3-217ENST00000504211 RHBDD1Q8TEB9 315 aa11.24□□□□□ -0.61
UBE2D3-217ENST00000504211 HINFPQ9BQA5 517 aa11.24□□□□□ -0.61
UBE2D3-217ENST00000504211 TSPAN10Q9H1Z9 355 aaPredicted RBP11.24□□□□□ -0.61
UBE2D3-217ENST00000504211 OCLNQ16625 522 aa11.23□□□□□ -0.61
UBE2D3-217ENST00000504211 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.23□□□□□ -0.61
UBE2D3-217ENST00000504211 WDR44Q5JSH3 913 aa11.23□□□□□ -0.61
UBE2D3-217ENST00000504211 TMEM214Q6NUQ4 689 aaKnown RBP11.23□□□□□ -0.61
UBE2D3-217ENST00000504211 SLAIN2Q9P270 581 aa11.23□□□□□ -0.61
UBE2D3-217ENST00000504211 FIGNL2A6NMB9 653 aa11.22□□□□□ -0.61
UBE2D3-217ENST00000504211 C21orf2O43822 256 aa11.22□□□□□ -0.61
UBE2D3-217ENST00000504211 MAN1A2O60476 641 aa11.22□□□□□ -0.61
UBE2D3-217ENST00000504211 IGFBP4P22692 258 aa11.22□□□□□ -0.61
UBE2D3-217ENST00000504211 GTF2E1P29083 439 aaPredicted RBP11.22□□□□□ -0.61
UBE2D3-217ENST00000504211 WEE1P30291 646 aa11.22□□□□□ -0.61
UBE2D3-217ENST00000504211 GNASQ5JWF2 1037 aa11.22□□□□□ -0.61
UBE2D3-217ENST00000504211 NBPF10Q6P3W6 841 aaKnown RBP11.22□□□□□ -0.61
UBE2D3-217ENST00000504211 POTEAQ6S8J7 498 aa11.22□□□□□ -0.61
UBE2D3-217ENST00000504211 GAS2L2Q8NHY3 880 aa11.22□□□□□ -0.61
UBE2D3-217ENST00000504211 SNRPBP14678 240 aaKnown RBP11.21□□□□□ -0.61
UBE2D3-217ENST00000504211 PRICKLE2Q7Z3G6 844 aa11.21□□□□□ -0.61
UBE2D3-217ENST00000504211 STAG2Q8N3U4 1231 aa11.21□□□□□ -0.61
UBE2D3-217ENST00000504211 PSMA6P60900 246 aaKnown RBP11.2□□□□□ -0.62
UBE2D3-217ENST00000504211 C4orf17Q53FE4 359 aa11.2□□□□□ -0.62
UBE2D3-217ENST00000504211 TAS1R3Q7RTX0 852 aa11.2□□□□□ -0.62
UBE2D3-217ENST00000504211 NIFKQ9BYG3 293 aaKnown RBP11.2□□□□□ -0.62
UBE2D3-217ENST00000504211 POTECB2RU33 542 aa11.19□□□□□ -0.62
UBE2D3-217ENST00000504211 C11orf95C9JLR9 678 aaPredicted RBP11.19□□□□□ -0.62
UBE2D3-217ENST00000504211 TEAD4Q15561 434 aa11.19□□□□□ -0.62
UBE2D3-217ENST00000504211 SCG3Q8WXD2 468 aaKnown RBP11.19□□□□□ -0.62
UBE2D3-217ENST00000504211 ATAD2Q6PL18 1390 aa11.18□□□□□ -0.62
UBE2D3-217ENST00000504211 CARNS1A5YM72 827 aa11.18□□□□□ -0.62
UBE2D3-217ENST00000504211 SOBPA7XYQ1 873 aa11.18□□□□□ -0.62
UBE2D3-217ENST00000504211 HIRAP54198 1017 aaPredicted RBP11.18□□□□□ -0.62
UBE2D3-217ENST00000504211 POU4F2Q12837 409 aa11.18□□□□□ -0.62
UBE2D3-217ENST00000504211 TBCELQ5QJ74 424 aa11.18□□□□□ -0.62
UBE2D3-217ENST00000504211 CXXC1Q9P0U4 656 aaPredicted RBP11.18□□□□□ -0.62
UBE2D3-217ENST00000504211 FOXO3O43524 673 aa11.17□□□□□ -0.62
UBE2D3-217ENST00000504211 PPP1R12BO60237 982 aaPredicted RBP11.17□□□□□ -0.62
UBE2D3-217ENST00000504211 PRMT3O60678 531 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms