RNA–Protein interactions for RNA: ENST00000504101.1

POLR2J3-208, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-208ENST00000504101 ATG3Q9NT62 314 aa23.39■■□□□ 1.33
POLR2J3-208ENST00000504101 POLKQ9UBT6 870 aa23.38■■□□□ 1.33
POLR2J3-208ENST00000504101 PXDNLA1KZ92 1463 aa23.37■■□□□ 1.33
POLR2J3-208ENST00000504101 KDRP35968 1356 aa23.37■■□□□ 1.33
POLR2J3-208ENST00000504101 KIF13BQ9NQT8 1826 aa23.36■■□□□ 1.33
POLR2J3-208ENST00000504101 PLEKHG2Q9H7P9 1386 aa23.36■■□□□ 1.33
POLR2J3-208ENST00000504101 KIF3CO14782 793 aa23.35■■□□□ 1.33
POLR2J3-208ENST00000504101 EIF4A2Q14240 407 aaKnown RBP23.35■■□□□ 1.33
POLR2J3-208ENST00000504101 RTCBQ9Y3I0 505 aaKnown RBP23.35■■□□□ 1.33
POLR2J3-208ENST00000504101 KIAA1551Q9HCM1 1747 aa23.35■■□□□ 1.33
POLR2J3-208ENST00000504101 N4BP2Q86UW6 1770 aaPredicted RBP23.33■■□□□ 1.33
POLR2J3-208ENST00000504101 TRAPPC3LQ5T215 181 aa23.33■■□□□ 1.33
POLR2J3-208ENST00000504101 C10orf71Q711Q0 1435 aa23.33■■□□□ 1.32
POLR2J3-208ENST00000504101 ZNF831Q5JPB2 1677 aa23.32■■□□□ 1.32
POLR2J3-208ENST00000504101 TNNT2P45379 298 aaPredicted RBP23.32■■□□□ 1.32
POLR2J3-208ENST00000504101 TGFB2P61812 414 aa23.31■■□□□ 1.32
POLR2J3-208ENST00000504101 NLGN1Q8N2Q7 840 aa23.31■■□□□ 1.32
POLR2J3-208ENST00000504101 SLC4A9Q96Q91 983 aa23.31■■□□□ 1.32
POLR2J3-208ENST00000504101 RBM42Q9BTD8 480 aaKnown RBP23.31■■□□□ 1.32
POLR2J3-208ENST00000504101 BCS1LQ9Y276 419 aa23.31■■□□□ 1.32
POLR2J3-208ENST00000504101 COL5A3P25940 1745 aaPredicted RBP23.3■■□□□ 1.32
POLR2J3-208ENST00000504101 ERVV-2B6SEH9 535 aa23.3■■□□□ 1.32
POLR2J3-208ENST00000504101 ADRA2BP18089 450 aa23.3■■□□□ 1.32
POLR2J3-208ENST00000504101 A0A0G2JLW4 131 aa23.29■■□□□ 1.32
POLR2J3-208ENST00000504101 HSP90AB1P08238 724 aaKnown RBP23.29■■□□□ 1.32
POLR2J3-208ENST00000504101 DCAF5Q96JK2 942 aa23.29■■□□□ 1.32
POLR2J3-208ENST00000504101 POLR3GLQ9BT43 218 aa23.29■■□□□ 1.32
POLR2J3-208ENST00000504101 CNTNAP4Q9C0A0 1308 aa23.29■■□□□ 1.32
POLR2J3-208ENST00000504101 C4AP0C0L4 1744 aa23.28■■□□□ 1.32
POLR2J3-208ENST00000504101 RC3H1Q5TC82 1133 aaKnown RBP23.28■■□□□ 1.32
POLR2J3-208ENST00000504101 ARHGEF1Q92888 912 aaKnown RBP23.28■■□□□ 1.32
POLR2J3-208ENST00000504101 GYS1P13807 737 aa23.27■■□□□ 1.32
POLR2J3-208ENST00000504101 CCDC87Q9NVE4 849 aa23.27■■□□□ 1.32
POLR2J3-208ENST00000504101 KDM6AO15550 1401 aaPredicted RBP23.26■■□□□ 1.31
POLR2J3-208ENST00000504101 RFC4P35249 363 aa23.26■■□□□ 1.31
POLR2J3-208ENST00000504101 PLEKHO1Q53GL0 409 aaPredicted RBP23.26■■□□□ 1.31
POLR2J3-208ENST00000504101 RPS6KA4O75676 772 aa23.25■■□□□ 1.31
POLR2J3-208ENST00000504101 DPEP1P16444 411 aa23.25■■□□□ 1.31
POLR2J3-208ENST00000504101 ZNF530Q6P9A1 599 aaPredicted RBP23.25■■□□□ 1.31
POLR2J3-208ENST00000504101 ARHGAP27Q6ZUM4 889 aa23.25■■□□□ 1.31
POLR2J3-208ENST00000504101 BRCA1P38398 1863 aaKnown RBP23.24■■□□□ 1.31
POLR2J3-208ENST00000504101 MYH14Q7Z406 1995 aaKnown RBP23.24■■□□□ 1.31
POLR2J3-208ENST00000504101 CABP4P57796 275 aa23.24■■□□□ 1.31
POLR2J3-208ENST00000504101 PARP3Q9Y6F1 533 aa23.24■■□□□ 1.31
POLR2J3-208ENST00000504101 TOMM70O94826 608 aa23.23■■□□□ 1.31
POLR2J3-208ENST00000504101 FCHSD2O94868 740 aa23.23■■□□□ 1.31
POLR2J3-208ENST00000504101 APLP1P51693 650 aa23.23■■□□□ 1.31
POLR2J3-208ENST00000504101 TIMELESSQ9UNS1 1208 aa23.23■■□□□ 1.31
POLR2J3-208ENST00000504101 AMOTQ4VCS5 1084 aa23.22■■□□□ 1.31
POLR2J3-208ENST00000504101 TRIM26Q12899 539 aaPredicted RBP23.2■■□□□ 1.3
POLR2J3-208ENST00000504101 NMRK2Q9NPI5 230 aa23.2■■□□□ 1.3
POLR2J3-208ENST00000504101 PTCD1O75127 700 aaKnown RBP23.19■■□□□ 1.3
POLR2J3-208ENST00000504101 MTHFSP49914 203 aa23.19■■□□□ 1.3
POLR2J3-208ENST00000504101 C1orf141Q5JVX7 400 aa23.19■■□□□ 1.3
POLR2J3-208ENST00000504101 ARFGEF1Q9Y6D6 1849 aa23.19■■□□□ 1.3
POLR2J3-208ENST00000504101 KCNA3P22001 575 aa23.18■■□□□ 1.3
POLR2J3-208ENST00000504101 CRKLP46109 303 aaKnown RBP23.18■■□□□ 1.3
POLR2J3-208ENST00000504101 AEBP1Q8IUX7 1158 aa23.18■■□□□ 1.3
POLR2J3-208ENST00000504101 USP42Q9H9J4 1324 aaKnown RBP23.16■■□□□ 1.3
POLR2J3-208ENST00000504101 C9orf131Q5VYM1 1079 aa23.16■■□□□ 1.3
POLR2J3-208ENST00000504101 PANK3Q9H999 370 aa23.16■■□□□ 1.3
POLR2J3-208ENST00000504101 PIM2Q9P1W9 311 aa23.16■■□□□ 1.3
POLR2J3-208ENST00000504101 SRP68Q9UHB9 627 aaKnown RBP23.16■■□□□ 1.3
POLR2J3-208ENST00000504101 TJP1Q07157 1748 aa23.16■■□□□ 1.3
POLR2J3-208ENST00000504101 NFATC2IPQ8NCF5 419 aa23.15■■□□□ 1.3
POLR2J3-208ENST00000504101 DDR1Q08345 913 aa23.14■■□□□ 1.29
POLR2J3-208ENST00000504101 FKBP8Q14318 412 aa23.14■■□□□ 1.29
POLR2J3-208ENST00000504101 DALRD3Q5D0E6 543 aaKnown RBP23.13■■□□□ 1.29
POLR2J3-208ENST00000504101 DNAJC5GQ8N7S2 189 aa23.13■■□□□ 1.29
POLR2J3-208ENST00000504101 SULT6B1Q6IMI4 303 aa23.12■■□□□ 1.29
POLR2J3-208ENST00000504101 MORC1Q86VD1 984 aa23.12■■□□□ 1.29
POLR2J3-208ENST00000504101 C16orf71Q8IYS4 520 aaPredicted RBP23.12■■□□□ 1.29
POLR2J3-208ENST00000504101 RBM46Q8TBY0 533 aaKnown RBP23.12■■□□□ 1.29
POLR2J3-208ENST00000504101 SCN11AQ9UI33 1791 aa23.11■■□□□ 1.29
POLR2J3-208ENST00000504101 WDR90Q96KV7 1748 aa23.11■■□□□ 1.29
POLR2J3-208ENST00000504101 KCPQ6ZWJ8 1503 aa23.1■■□□□ 1.29
POLR2J3-208ENST00000504101 EIF4G2P78344 907 aaKnown RBP eCLIP23.1■■□□□ 1.29
POLR2J3-208ENST00000504101 ADAMTS7Q9UKP4 1686 aa23.09■■□□□ 1.29
POLR2J3-208ENST00000504101 HSPA5P11021 654 aaKnown RBP23.09■■□□□ 1.29
POLR2J3-208ENST00000504101 CHRNA5P30532 468 aa23.09■■□□□ 1.29
POLR2J3-208ENST00000504101 INTS5Q6P9B9 1019 aaKnown RBP23.09■■□□□ 1.29
POLR2J3-208ENST00000504101 RNF181Q9P0P0 153 aa23.09■■□□□ 1.29
POLR2J3-208ENST00000504101 KDM2BQ8NHM5 1336 aa23.08■■□□□ 1.29
POLR2J3-208ENST00000504101 CLSPNQ9HAW4 1339 aa23.08■■□□□ 1.29
POLR2J3-208ENST00000504101 POLRMTO00411 1230 aaKnown RBP23.08■■□□□ 1.29
POLR2J3-208ENST00000504101 ZPR1O75312 459 aa23.07■■□□□ 1.28
POLR2J3-208ENST00000504101 IL13P35225 146 aa23.06■■□□□ 1.28
POLR2J3-208ENST00000504101 DNAJC10Q8IXB1 793 aa23.06■■□□□ 1.28
POLR2J3-208ENST00000504101 TM4SF1P30408 202 aa23.05■■□□□ 1.28
POLR2J3-208ENST00000504101 FSTL1Q12841 308 aa23.05■■□□□ 1.28
POLR2J3-208ENST00000504101 AKAP4Q5JQC9 854 aa23.05■■□□□ 1.28
POLR2J3-208ENST00000504101 USPL1Q5W0Q7 1092 aa23.05■■□□□ 1.28
POLR2J3-208ENST00000504101 SLC52A2Q9HAB3 445 aa23.05■■□□□ 1.28
POLR2J3-208ENST00000504101 TNRC6CQ9HCJ0 1690 aaKnown RBP23.05■■□□□ 1.28
POLR2J3-208ENST00000504101 SOS1Q07889 1333 aaPredicted RBP23.05■■□□□ 1.28
POLR2J3-208ENST00000504101 SBF1O95248 1867 aa23.05■■□□□ 1.28
POLR2J3-208ENST00000504101 MRC1P22897 1456 aa23.04■■□□□ 1.28
POLR2J3-208ENST00000504101 HTRA3P83110 453 aa23.03■■□□□ 1.28
POLR2J3-208ENST00000504101 KNSTRNQ9Y448 316 aa23.03■■□□□ 1.28
POLR2J3-208ENST00000504101 KLRG1Q96E93 195 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms