RNA–Protein interactions for RNA: ENST00000503942.1

UBE3D-205, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 3

Gene UBE3D, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-205ENST00000503942 GPAMQ9HCL2 828 aa9.72□□□□□ -0.85
UBE3D-205ENST00000503942 PHF24Q9UPV7 400 aa9.72□□□□□ -0.85
UBE3D-205ENST00000503942 ZNF592Q92610 1267 aa9.71□□□□□ -0.86
UBE3D-205ENST00000503942 RAB6BQ9NRW1 208 aa9.71□□□□□ -0.86
UBE3D-205ENST00000503942 A0A1B0GTH6 734 aa9.7□□□□□ -0.86
UBE3D-205ENST00000503942 GNRH1P01148 92 aa9.7□□□□□ -0.86
UBE3D-205ENST00000503942 NR1H3Q13133 447 aa9.7□□□□□ -0.86
UBE3D-205ENST00000503942 UBAP2LQ14157 1087 aaKnown RBP9.7□□□□□ -0.86
UBE3D-205ENST00000503942 ESYT1Q9BSJ8 1104 aa9.7□□□□□ -0.86
UBE3D-205ENST00000503942 GOPCQ9HD26 462 aa9.7□□□□□ -0.86
UBE3D-205ENST00000503942 IL2RAP01589 272 aa9.69□□□□□ -0.86
UBE3D-205ENST00000503942 LBRQ14739 615 aaKnown RBP9.69□□□□□ -0.86
UBE3D-205ENST00000503942 CNKSR1Q969H4 720 aa9.69□□□□□ -0.86
UBE3D-205ENST00000503942 GOLGA6L1Q8N7Z2 621 aa9.68□□□□□ -0.86
UBE3D-205ENST00000503942 EDARADDQ8WWZ3 215 aa9.68□□□□□ -0.86
UBE3D-205ENST00000503942 ESF1Q9H501 851 aaKnown RBP9.68□□□□□ -0.86
UBE3D-205ENST00000503942 RRAGCQ9HB90 399 aa9.68□□□□□ -0.86
UBE3D-205ENST00000503942 HRH3Q9Y5N1 445 aa9.68□□□□□ -0.86
UBE3D-205ENST00000503942 HOXB4P17483 251 aaPredicted RBP9.67□□□□□ -0.86
UBE3D-205ENST00000503942 CENPCQ03188 943 aa9.67□□□□□ -0.86
UBE3D-205ENST00000503942 PCMTD1Q96MG8 357 aaPredicted RBP9.67□□□□□ -0.86
UBE3D-205ENST00000503942 FURINP09958 794 aa9.66□□□□□ -0.86
UBE3D-205ENST00000503942 PHKA2P46019 1235 aa9.66□□□□□ -0.86
UBE3D-205ENST00000503942 SLCO4C1Q6ZQN7 724 aa9.66□□□□□ -0.86
UBE3D-205ENST00000503942 Q8N3U1 123 aa9.66□□□□□ -0.86
UBE3D-205ENST00000503942 ATXN7L1Q9ULK2 861 aaPredicted RBP9.66□□□□□ -0.86
UBE3D-205ENST00000503942 GPR37L1O60883 481 aa9.65□□□□□ -0.86
UBE3D-205ENST00000503942 LINC00114Q6XXX2 140 aa9.65□□□□□ -0.86
UBE3D-205ENST00000503942 ZSCAN10Q96SZ4 725 aaPredicted RBP9.65□□□□□ -0.86
UBE3D-205ENST00000503942 FHDC1Q9C0D6 1143 aaPredicted RBP9.65□□□□□ -0.86
UBE3D-205ENST00000503942 ZNF330Q9Y3S2 320 aaPredicted RBP9.65□□□□□ -0.86
UBE3D-205ENST00000503942 GRIN2CQ14957 1233 aa9.64□□□□□ -0.87
UBE3D-205ENST00000503942 GNASQ5JWF2 1037 aa9.64□□□□□ -0.87
UBE3D-205ENST00000503942 KRTAP4-8Q9BYQ9 185 aa9.64□□□□□ -0.87
UBE3D-205ENST00000503942 RUBCNLQ9H714 662 aa9.64□□□□□ -0.87
UBE3D-205ENST00000503942 CSB-PGBD3P0DP91 1061 aa9.63□□□□□ -0.87
UBE3D-205ENST00000503942 BMP4P12644 408 aa9.63□□□□□ -0.87
UBE3D-205ENST00000503942 C4orf17Q53FE4 359 aa9.63□□□□□ -0.87
UBE3D-205ENST00000503942 PGBD3Q8N328 593 aa9.63□□□□□ -0.87
UBE3D-205ENST00000503942 XAGE2Q96GT9 111 aa9.63□□□□□ -0.87
UBE3D-205ENST00000503942 SUV39H2Q9H5I1 410 aa9.63□□□□□ -0.87
UBE3D-205ENST00000503942 NDFIP2Q9NV92 336 aa9.63□□□□□ -0.87
UBE3D-205ENST00000503942 C2CD2LO14523 706 aa9.62□□□□□ -0.87
UBE3D-205ENST00000503942 MYCP01106 439 aaPredicted RBP9.62□□□□□ -0.87
UBE3D-205ENST00000503942 AMPD1P23109 780 aa9.62□□□□□ -0.87
UBE3D-205ENST00000503942 MSX1P28360 303 aa9.62□□□□□ -0.87
UBE3D-205ENST00000503942 EFHC2Q5JST6 749 aa9.62□□□□□ -0.87
UBE3D-205ENST00000503942 ABHD17AQ96GS6 310 aa9.62□□□□□ -0.87
UBE3D-205ENST00000503942 GGA1Q9UJY5 639 aa9.62□□□□□ -0.87
UBE3D-205ENST00000503942 PIK3R2O00459 728 aa9.61□□□□□ -0.87
UBE3D-205ENST00000503942 GNB5O14775 395 aa9.61□□□□□ -0.87
UBE3D-205ENST00000503942 FGFR3P22607 806 aa9.61□□□□□ -0.87
UBE3D-205ENST00000503942 GTF2E1P29083 439 aaPredicted RBP9.61□□□□□ -0.87
UBE3D-205ENST00000503942 SOCS7O14512 581 aa9.6□□□□□ -0.87
UBE3D-205ENST00000503942 TMEM214Q6NUQ4 689 aaKnown RBP9.6□□□□□ -0.87
UBE3D-205ENST00000503942 BNIP3LO60238 219 aa9.59□□□□□ -0.87
UBE3D-205ENST00000503942 EPXP11678 715 aa9.59□□□□□ -0.87
UBE3D-205ENST00000503942 CCDC85AQ96PX6 553 aaPredicted RBP9.59□□□□□ -0.87
UBE3D-205ENST00000503942 CDCA7Q9BWT1 371 aaPredicted RBP9.59□□□□□ -0.87
UBE3D-205ENST00000503942 CRISPLD1Q9H336 500 aa9.59□□□□□ -0.87
UBE3D-205ENST00000503942 C1QTNF9BB2RNN3 333 aa9.58□□□□□ -0.88
UBE3D-205ENST00000503942 DGKGP49619 791 aa9.58□□□□□ -0.88
UBE3D-205ENST00000503942 CTBSQ01459 385 aa9.58□□□□□ -0.88
UBE3D-205ENST00000503942 ESCO1Q5FWF5 840 aa9.58□□□□□ -0.88
UBE3D-205ENST00000503942 CD163Q86VB7 1156 aa9.58□□□□□ -0.88
UBE3D-205ENST00000503942 RHBDD1Q8TEB9 315 aa9.58□□□□□ -0.88
UBE3D-205ENST00000503942 ARAFP10398 606 aa9.57□□□□□ -0.88
UBE3D-205ENST00000503942 BTBD6Q96KE9 485 aa9.57□□□□□ -0.88
UBE3D-205ENST00000503942 NDUFB9Q9Y6M9 179 aa9.57□□□□□ -0.88
UBE3D-205ENST00000503942 BRPF1P55201 1214 aaPredicted RBP9.56□□□□□ -0.88
UBE3D-205ENST00000503942 RNF135Q8IUD6 432 aa9.56□□□□□ -0.88
UBE3D-205ENST00000503942 NOP53Q9NZM5 478 aaKnown RBP9.56□□□□□ -0.88
UBE3D-205ENST00000503942 CEP126Q9P2H0 1117 aa9.56□□□□□ -0.88
UBE3D-205ENST00000503942 CHRNA4P43681 627 aa9.55□□□□□ -0.88
UBE3D-205ENST00000503942 PPARGC1BQ86YN6 1023 aaKnown RBP9.55□□□□□ -0.88
UBE3D-205ENST00000503942 MTMR14Q8NCE2 650 aa9.55□□□□□ -0.88
UBE3D-205ENST00000503942 FIGNL1Q6PIW4 674 aa9.54□□□□□ -0.88
UBE3D-205ENST00000503942 BANK1Q8NDB2 785 aa9.54□□□□□ -0.88
UBE3D-205ENST00000503942 DNAAF2Q9NVR5 837 aaKnown RBP9.54□□□□□ -0.88
UBE3D-205ENST00000503942 NEURL1BA8MQ27 555 aa9.53□□□□□ -0.88
UBE3D-205ENST00000503942 ITGB7P26010 798 aa9.53□□□□□ -0.88
UBE3D-205ENST00000503942 TLR1Q15399 786 aa9.53□□□□□ -0.88
UBE3D-205ENST00000503942 TBC1D9Q6ZT07 1266 aa9.53□□□□□ -0.88
UBE3D-205ENST00000503942 ETNK1Q9HBU6 452 aa9.53□□□□□ -0.88
UBE3D-205ENST00000503942 PSMG3-AS1Q96PY0 264 aa9.52□□□□□ -0.89
UBE3D-205ENST00000503942 PCDHGC4Q9Y5F7 938 aa9.52□□□□□ -0.89
UBE3D-205ENST00000503942 STAU1O95793 577 aaKnown RBP9.51□□□□□ -0.89
UBE3D-205ENST00000503942 ATP4AP20648 1035 aa9.51□□□□□ -0.89
UBE3D-205ENST00000503942 PLA2G4AP47712 749 aa9.51□□□□□ -0.89
UBE3D-205ENST00000503942 C1orf216Q8TAB5 229 aa9.51□□□□□ -0.89
UBE3D-205ENST00000503942 ZCCHC2Q9C0B9 1178 aaKnown RBP9.51□□□□□ -0.89
UBE3D-205ENST00000503942 APBB1O00213 710 aa9.5□□□□□ -0.89
UBE3D-205ENST00000503942 CHSY3Q70JA7 882 aa9.5□□□□□ -0.89
UBE3D-205ENST00000503942 NLRP8Q86W28 1048 aa9.5□□□□□ -0.89
UBE3D-205ENST00000503942 DOLKQ9UPQ8 538 aa9.5□□□□□ -0.89
UBE3D-205ENST00000503942 ADH6P28332 368 aa9.49□□□□□ -0.89
UBE3D-205ENST00000503942 USP4Q13107 963 aa9.49□□□□□ -0.89
UBE3D-205ENST00000503942 HCN2Q9UL51 889 aa9.49□□□□□ -0.89
UBE3D-205ENST00000503942 NEUROD2Q15784 382 aa9.48□□□□□ -0.89
UBE3D-205ENST00000503942 FAM182BQ5T319 152 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms