RNA–Protein interactions for RNA: ENST00000503884.5

PROM1-204, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-204ENST00000503884 COL5A3P25940 1745 aaPredicted RBP12.44□□□□□ -0.42
PROM1-204ENST00000503884 KDRP35968 1356 aa12.43□□□□□ -0.42
PROM1-204ENST00000503884 IGSF1Q8N6C5 1336 aa12.43□□□□□ -0.42
PROM1-204ENST00000503884 KIAA1551Q9HCM1 1747 aa12.43□□□□□ -0.42
PROM1-204ENST00000503884 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.43□□□□□ -0.42
PROM1-204ENST00000503884 SSFA2P28290 1259 aa12.43□□□□□ -0.42
PROM1-204ENST00000503884 ITPK1Q13572 414 aa12.43□□□□□ -0.42
PROM1-204ENST00000503884 SMIM5Q71RC9 77 aa12.43□□□□□ -0.42
PROM1-204ENST00000503884 PELP1Q8IZL8 1130 aaKnown RBP12.43□□□□□ -0.42
PROM1-204ENST00000503884 AK7Q96M32 723 aa12.43□□□□□ -0.42
PROM1-204ENST00000503884 ASAP1Q9ULH1 1129 aa12.43□□□□□ -0.42
PROM1-204ENST00000503884 ATG3Q9NT62 314 aa12.42□□□□□ -0.42
PROM1-204ENST00000503884 TMOD3Q9NYL9 352 aa12.42□□□□□ -0.42
PROM1-204ENST00000503884 SLC4A9Q96Q91 983 aa12.41□□□□□ -0.42
PROM1-204ENST00000503884 MYH14Q7Z406 1995 aaKnown RBP12.41□□□□□ -0.42
PROM1-204ENST00000503884 ADCY9O60503 1353 aa12.41□□□□□ -0.42
PROM1-204ENST00000503884 GIGYF1O75420 1035 aaPredicted RBP12.4□□□□□ -0.42
PROM1-204ENST00000503884 PHF14O94880 888 aa12.4□□□□□ -0.42
PROM1-204ENST00000503884 CICQ96RK0 1608 aaPredicted RBP12.4□□□□□ -0.42
PROM1-204ENST00000503884 KDM6AO15550 1401 aaPredicted RBP12.39□□□□□ -0.43
PROM1-204ENST00000503884 ATP10DQ9P241 1426 aa12.39□□□□□ -0.43
PROM1-204ENST00000503884 ERVV-2B6SEH9 535 aa12.39□□□□□ -0.43
PROM1-204ENST00000503884 HSPA5P11021 654 aaKnown RBP12.39□□□□□ -0.43
PROM1-204ENST00000503884 ATP6V1AP38606 617 aa12.39□□□□□ -0.43
PROM1-204ENST00000503884 EIF4G2P78344 907 aaKnown RBP eCLIP12.39□□□□□ -0.43
PROM1-204ENST00000503884 PANK3Q9H999 370 aa12.39□□□□□ -0.43
PROM1-204ENST00000503884 C4AP0C0L4 1744 aa12.38□□□□□ -0.43
PROM1-204ENST00000503884 SENP3-EIF4A1A0A087X0R7 540 aa12.38□□□□□ -0.43
PROM1-204ENST00000503884 GNPATO15228 680 aa12.38□□□□□ -0.43
PROM1-204ENST00000503884 TNNT2P45379 298 aaPredicted RBP12.38□□□□□ -0.43
PROM1-204ENST00000503884 SCN11AQ9UI33 1791 aa12.38□□□□□ -0.43
PROM1-204ENST00000503884 BRCA1P38398 1863 aaKnown RBP12.38□□□□□ -0.43
PROM1-204ENST00000503884 RC3H1Q5TC82 1133 aaKnown RBP12.37□□□□□ -0.43
PROM1-204ENST00000503884 DCAF5Q96JK2 942 aa12.37□□□□□ -0.43
PROM1-204ENST00000503884 TJP1Q07157 1748 aa12.37□□□□□ -0.43
PROM1-204ENST00000503884 N4BP2Q86UW6 1770 aaPredicted RBP12.36□□□□□ -0.43
PROM1-204ENST00000503884 HSP90AB1P08238 724 aaKnown RBP12.36□□□□□ -0.43
PROM1-204ENST00000503884 POLR3GLQ9BT43 218 aa12.36□□□□□ -0.43
PROM1-204ENST00000503884 VIRMAQ69YN4 1812 aaKnown RBP12.36□□□□□ -0.43
PROM1-204ENST00000503884 CNTNAP4Q9C0A0 1308 aa12.36□□□□□ -0.43
PROM1-204ENST00000503884 ADAMTS7Q9UKP4 1686 aa12.35□□□□□ -0.43
PROM1-204ENST00000503884 PXDNLA1KZ92 1463 aa12.35□□□□□ -0.43
PROM1-204ENST00000503884 AMOTQ4VCS5 1084 aa12.35□□□□□ -0.43
PROM1-204ENST00000503884 PLEKHO1Q53GL0 409 aaPredicted RBP12.35□□□□□ -0.43
PROM1-204ENST00000503884 AEBP1Q8IUX7 1158 aa12.35□□□□□ -0.43
PROM1-204ENST00000503884 U3KPZ7 1027 aaPredicted RBP12.35□□□□□ -0.43
PROM1-204ENST00000503884 MMP10P09238 476 aa12.34□□□□□ -0.43
PROM1-204ENST00000503884 C10orf71Q711Q0 1435 aa12.34□□□□□ -0.43
PROM1-204ENST00000503884 RPS6KA4O75676 772 aa12.33□□□□□ -0.44
PROM1-204ENST00000503884 GYS1P13807 737 aa12.33□□□□□ -0.44
PROM1-204ENST00000503884 IL13P35225 146 aa12.33□□□□□ -0.44
PROM1-204ENST00000503884 TRAPPC3LQ5T215 181 aa12.33□□□□□ -0.44
PROM1-204ENST00000503884 ZNF530Q6P9A1 599 aaPredicted RBP12.33□□□□□ -0.44
PROM1-204ENST00000503884 NLGN1Q8N2Q7 840 aa12.33□□□□□ -0.44
PROM1-204ENST00000503884 ARHGEF1Q92888 912 aaKnown RBP12.33□□□□□ -0.44
PROM1-204ENST00000503884 RTCBQ9Y3I0 505 aaKnown RBP12.33□□□□□ -0.44
PROM1-204ENST00000503884 AMER1Q5JTC6 1135 aaPredicted RBP12.32□□□□□ -0.44
PROM1-204ENST00000503884 MORC1Q86VD1 984 aa12.32□□□□□ -0.44
PROM1-204ENST00000503884 RBM42Q9BTD8 480 aaKnown RBP12.32□□□□□ -0.44
PROM1-204ENST00000503884 ARFGEF1Q9Y6D6 1849 aa12.32□□□□□ -0.44
PROM1-204ENST00000503884 MTHFSP49914 203 aa12.31□□□□□ -0.44
PROM1-204ENST00000503884 CABP4P57796 275 aa12.31□□□□□ -0.44
PROM1-204ENST00000503884 TGFB2P61812 414 aa12.31□□□□□ -0.44
PROM1-204ENST00000503884 GPBP1L1Q9HC44 474 aaPredicted RBP12.31□□□□□ -0.44
PROM1-204ENST00000503884 MRC1P22897 1456 aa12.3□□□□□ -0.44
PROM1-204ENST00000503884 SULT6B1Q6IMI4 303 aa12.3□□□□□ -0.44
PROM1-204ENST00000503884 NFATC2IPQ8NCF5 419 aa12.3□□□□□ -0.44
PROM1-204ENST00000503884 WWC3Q9ULE0 1092 aa12.3□□□□□ -0.44
PROM1-204ENST00000503884 KNSTRNQ9Y448 316 aa12.29□□□□□ -0.44
PROM1-204ENST00000503884 A0A0G2JLW4 131 aa12.28□□□□□ -0.44
PROM1-204ENST00000503884 KIF3CO14782 793 aa12.28□□□□□ -0.44
PROM1-204ENST00000503884 ZBTB22O15209 634 aa12.28□□□□□ -0.44
PROM1-204ENST00000503884 KCNA3P22001 575 aa12.28□□□□□ -0.44
PROM1-204ENST00000503884 RFC4P35249 363 aa12.28□□□□□ -0.44
PROM1-204ENST00000503884 CRKLP46109 303 aaKnown RBP12.28□□□□□ -0.44
PROM1-204ENST00000503884 AKAP4Q5JQC9 854 aa12.28□□□□□ -0.44
PROM1-204ENST00000503884 C1orf141Q5JVX7 400 aa12.28□□□□□ -0.44
PROM1-204ENST00000503884 USP42Q9H9J4 1324 aaKnown RBP12.28□□□□□ -0.44
PROM1-204ENST00000503884 UBR2Q8IWV8 1755 aa12.28□□□□□ -0.44
PROM1-204ENST00000503884 PER1O15534 1290 aaPredicted RBP12.27□□□□□ -0.45
PROM1-204ENST00000503884 PTCD1O75127 700 aaKnown RBP12.27□□□□□ -0.45
PROM1-204ENST00000503884 DPEP1P16444 411 aa12.27□□□□□ -0.45
PROM1-204ENST00000503884 INTS5Q6P9B9 1019 aaKnown RBP12.27□□□□□ -0.45
PROM1-204ENST00000503884 FOXD4L1Q9NU39 408 aa12.27□□□□□ -0.45
PROM1-204ENST00000503884 CCDC87Q9NVE4 849 aa12.27□□□□□ -0.45
PROM1-204ENST00000503884 NRXN2Q9P2S2 1712 aa12.27□□□□□ -0.45
PROM1-204ENST00000503884 KIF7Q2M1P5 1343 aa12.27□□□□□ -0.45
PROM1-204ENST00000503884 AFDNP55196 1824 aaKnown RBP12.27□□□□□ -0.45
PROM1-204ENST00000503884 KCPQ6ZWJ8 1503 aa12.27□□□□□ -0.45
PROM1-204ENST00000503884 SBF1O95248 1867 aa12.26□□□□□ -0.45
PROM1-204ENST00000503884 C1QBPQ07021 282 aaKnown RBP12.26□□□□□ -0.45
PROM1-204ENST00000503884 DDR1Q08345 913 aa12.26□□□□□ -0.45
PROM1-204ENST00000503884 FKBP8Q14318 412 aa12.26□□□□□ -0.45
PROM1-204ENST00000503884 ZNF526Q8TF50 670 aaPredicted RBP12.26□□□□□ -0.45
PROM1-204ENST00000503884 SLC52A2Q9HAB3 445 aa12.26□□□□□ -0.45
PROM1-204ENST00000503884 LGR6Q9HBX8 967 aa12.26□□□□□ -0.45
PROM1-204ENST00000503884 SRP68Q9UHB9 627 aaKnown RBP12.26□□□□□ -0.45
PROM1-204ENST00000503884 HSPA6P17066 643 aa12.25□□□□□ -0.45
PROM1-204ENST00000503884 TM4SF1P30408 202 aa12.25□□□□□ -0.45
PROM1-204ENST00000503884 BCS1LQ9Y276 419 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms