RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 KDRP35968 1356 aa26.37■■□□□ 1.81
UBE2D3-215ENST00000503418 ERVV-2B6SEH9 535 aa26.37■■□□□ 1.81
UBE2D3-215ENST00000503418 ATP6V1AP38606 617 aa26.37■■□□□ 1.81
UBE2D3-215ENST00000503418 LINC00116Q8NCU8 138 aa26.37■■□□□ 1.81
UBE2D3-215ENST00000503418 PHF14O94880 888 aa26.36■■□□□ 1.81
UBE2D3-215ENST00000503418 CABP4P57796 275 aa26.34■■□□□ 1.81
UBE2D3-215ENST00000503418 ITPK1Q13572 414 aa26.34■■□□□ 1.81
UBE2D3-215ENST00000503418 SMIM5Q71RC9 77 aa26.34■■□□□ 1.81
UBE2D3-215ENST00000503418 AMIGO3Q86WK7 504 aa26.34■■□□□ 1.81
UBE2D3-215ENST00000503418 RBM42Q9BTD8 480 aaKnown RBP26.33■■□□□ 1.81
UBE2D3-215ENST00000503418 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.32■■□□□ 1.8
UBE2D3-215ENST00000503418 HMOX1P09601 288 aa26.32■■□□□ 1.8
UBE2D3-215ENST00000503418 NPC1L1Q9UHC9 1359 aa26.32■■□□□ 1.8
UBE2D3-215ENST00000503418 DIAPH1O60610 1272 aaKnown RBP26.31■■□□□ 1.8
UBE2D3-215ENST00000503418 GNPATO15228 680 aa26.3■■□□□ 1.8
UBE2D3-215ENST00000503418 SSFA2P28290 1259 aa26.3■■□□□ 1.8
UBE2D3-215ENST00000503418 SCN11AQ9UI33 1791 aa26.3■■□□□ 1.8
UBE2D3-215ENST00000503418 GPR162Q16538 588 aa26.29■■□□□ 1.8
UBE2D3-215ENST00000503418 NLGN2Q8NFZ4 835 aa26.29■■□□□ 1.8
UBE2D3-215ENST00000503418 PELP1Q8IZL8 1130 aaKnown RBP26.28■■□□□ 1.8
UBE2D3-215ENST00000503418 ZNF831Q5JPB2 1677 aa26.28■■□□□ 1.8
UBE2D3-215ENST00000503418 CHD4Q14839 1912 aa26.27■■□□□ 1.8
UBE2D3-215ENST00000503418 AKAP4Q5JQC9 854 aa26.26■■□□□ 1.79
UBE2D3-215ENST00000503418 NFATC2IPQ8NCF5 419 aa26.26■■□□□ 1.79
UBE2D3-215ENST00000503418 SLC4A9Q96Q91 983 aa26.26■■□□□ 1.79
UBE2D3-215ENST00000503418 VIRMAQ69YN4 1812 aaKnown RBP26.25■■□□□ 1.79
UBE2D3-215ENST00000503418 COL5A3P25940 1745 aaPredicted RBP26.25■■□□□ 1.79
UBE2D3-215ENST00000503418 UTRNP46939 3433 aa26.25■■□□□ 1.79
UBE2D3-215ENST00000503418 PTCD1O75127 700 aaKnown RBP26.24■■□□□ 1.79
UBE2D3-215ENST00000503418 COL3A1P02461 1466 aaPredicted RBP26.23■■□□□ 1.79
UBE2D3-215ENST00000503418 U2SURPO15042 1029 aaKnown RBP26.22■■□□□ 1.79
UBE2D3-215ENST00000503418 RTCBQ9Y3I0 505 aaKnown RBP26.22■■□□□ 1.79
UBE2D3-215ENST00000503418 MTHFSDQ2M296 383 aaKnown RBP26.2■■□□□ 1.78
UBE2D3-215ENST00000503418 LGR6Q9HBX8 967 aa26.2■■□□□ 1.78
UBE2D3-215ENST00000503418 CNTNAP4Q9C0A0 1308 aa26.19■■□□□ 1.78
UBE2D3-215ENST00000503418 RNMTO43148 476 aaKnown RBP26.18■■□□□ 1.78
UBE2D3-215ENST00000503418 TRAPPC3LQ5T215 181 aa26.18■■□□□ 1.78
UBE2D3-215ENST00000503418 RC3H1Q5TC82 1133 aaKnown RBP26.18■■□□□ 1.78
UBE2D3-215ENST00000503418 SLC52A2Q9HAB3 445 aa26.18■■□□□ 1.78
UBE2D3-215ENST00000503418 CD2APQ9Y5K6 639 aa26.18■■□□□ 1.78
UBE2D3-215ENST00000503418 MYH14Q7Z406 1995 aaKnown RBP26.18■■□□□ 1.78
UBE2D3-215ENST00000503418 TJP1Q07157 1748 aa26.17■■□□□ 1.78
UBE2D3-215ENST00000503418 MRC1P22897 1456 aa26.16■■□□□ 1.78
UBE2D3-215ENST00000503418 CFAP53Q96M91 514 aa26.15■■□□□ 1.78
UBE2D3-215ENST00000503418 GOLGB1Q14789 3259 aaKnown RBP26.14■■□□□ 1.78
UBE2D3-215ENST00000503418 RPS6KA4O75676 772 aa26.14■■□□□ 1.78
UBE2D3-215ENST00000503418 ADRA2BP18089 450 aa26.14■■□□□ 1.78
UBE2D3-215ENST00000503418 ARHGEF1Q92888 912 aaKnown RBP26.14■■□□□ 1.78
UBE2D3-215ENST00000503418 YBX3P16989 372 aaKnown RBP eCLIP26.13■■□□□ 1.77
UBE2D3-215ENST00000503418 RFC4P35249 363 aa26.13■■□□□ 1.77
UBE2D3-215ENST00000503418 CRKLP46109 303 aaKnown RBP26.13■■□□□ 1.77
UBE2D3-215ENST00000503418 C4AP0C0L4 1744 aa26.13■■□□□ 1.77
UBE2D3-215ENST00000503418 CICQ96RK0 1608 aaPredicted RBP26.13■■□□□ 1.77
UBE2D3-215ENST00000503418 ADAMTS7Q9UKP4 1686 aa26.12■■□□□ 1.77
UBE2D3-215ENST00000503418 MMP10P09238 476 aa26.12■■□□□ 1.77
UBE2D3-215ENST00000503418 SLC39A6Q13433 755 aa26.12■■□□□ 1.77
UBE2D3-215ENST00000503418 ZNF784Q8NCA9 323 aaPredicted RBP26.11■■□□□ 1.77
UBE2D3-215ENST00000503418 GAS2L2Q8NHY3 880 aa26.1■■□□□ 1.77
UBE2D3-215ENST00000503418 GRIN3BO60391 1043 aa26.09■■□□□ 1.77
UBE2D3-215ENST00000503418 PPP2R1AP30153 589 aa26.09■■□□□ 1.77
UBE2D3-215ENST00000503418 NLGN1Q8N2Q7 840 aa26.09■■□□□ 1.77
UBE2D3-215ENST00000503418 DNAJC10Q8IXB1 793 aa26.08■■□□□ 1.77
UBE2D3-215ENST00000503418 GYS1P13807 737 aa26.07■■□□□ 1.76
UBE2D3-215ENST00000503418 WWC3Q9ULE0 1092 aa26.07■■□□□ 1.76
UBE2D3-215ENST00000503418 NUDCQ9Y266 331 aa26.07■■□□□ 1.76
UBE2D3-215ENST00000503418 KCPQ6ZWJ8 1503 aa26.07■■□□□ 1.76
UBE2D3-215ENST00000503418 GNAT3A8MTJ3 354 aa26.05■■□□□ 1.76
UBE2D3-215ENST00000503418 PRKAR2BP31323 418 aa26.05■■□□□ 1.76
UBE2D3-215ENST00000503418 TEFQ10587 303 aa26.04■■□□□ 1.76
UBE2D3-215ENST00000503418 INTS5Q6P9B9 1019 aaKnown RBP26.04■■□□□ 1.76
UBE2D3-215ENST00000503418 RSPH6AQ9H0K4 717 aa26.04■■□□□ 1.76
UBE2D3-215ENST00000503418 CCDC87Q9NVE4 849 aa26.04■■□□□ 1.76
UBE2D3-215ENST00000503418 SRP68Q9UHB9 627 aaKnown RBP26.04■■□□□ 1.76
UBE2D3-215ENST00000503418 UBR2Q8IWV8 1755 aa26.04■■□□□ 1.76
UBE2D3-215ENST00000503418 U2AF1L5P0DN76 240 aaPredicted RBP26.03■■□□□ 1.76
UBE2D3-215ENST00000503418 U2AF1Q01081 240 aaKnown RBP eCLIP26.03■■□□□ 1.762e-12■□□□□ 11.1
UBE2D3-215ENST00000503418 TTC5Q8N0Z6 440 aa26.03■■□□□ 1.76
UBE2D3-215ENST00000503418 KIF13BQ9NQT8 1826 aa26.02■■□□□ 1.76
UBE2D3-215ENST00000503418 IL17REQ8NFR9 667 aa26.02■■□□□ 1.76
UBE2D3-215ENST00000503418 PHACTR3Q96KR7 559 aa26.02■■□□□ 1.76
UBE2D3-215ENST00000503418 PARP3Q9Y6F1 533 aa26.02■■□□□ 1.76
UBE2D3-215ENST00000503418 SIPA1L3O60292 1781 aaPredicted RBP26.01■■□□□ 1.75
UBE2D3-215ENST00000503418 CYP19A1P11511 503 aaPredicted RBP26.01■■□□□ 1.75
UBE2D3-215ENST00000503418 USP42Q9H9J4 1324 aaKnown RBP26.01■■□□□ 1.75
UBE2D3-215ENST00000503418 N4BP2Q86UW6 1770 aaPredicted RBP26■■□□□ 1.75
UBE2D3-215ENST00000503418 VSIG10Q8N0Z9 540 aa25.99■■□□□ 1.75
UBE2D3-215ENST00000503418 C10orf71Q711Q0 1435 aa25.98■■□□□ 1.75
UBE2D3-215ENST00000503418 SOS1Q07889 1333 aaPredicted RBP25.98■■□□□ 1.75
UBE2D3-215ENST00000503418 FKBP8Q14318 412 aa25.98■■□□□ 1.75
UBE2D3-215ENST00000503418 ZBTB1Q9Y2K1 713 aa25.98■■□□□ 1.75
UBE2D3-215ENST00000503418 PXDNLA1KZ92 1463 aa25.98■■□□□ 1.75
UBE2D3-215ENST00000503418 KIAA1551Q9HCM1 1747 aa25.97■■□□□ 1.75
UBE2D3-215ENST00000503418 ZPR1O75312 459 aa25.97■■□□□ 1.75
UBE2D3-215ENST00000503418 ZNF790Q6PG37 636 aa25.96■■□□□ 1.75
UBE2D3-215ENST00000503418 COL15A1P39059 1388 aa25.95■■□□□ 1.75
UBE2D3-215ENST00000503418 TGFB2P61812 414 aa25.95■■□□□ 1.74
UBE2D3-215ENST00000503418 USPL1Q5W0Q7 1092 aa25.95■■□□□ 1.74
UBE2D3-215ENST00000503418 CEMIPQ8WUJ3 1361 aa25.95■■□□□ 1.74
UBE2D3-215ENST00000503418 FCHSD2O94868 740 aa25.94■■□□□ 1.74
UBE2D3-215ENST00000503418 ZNF496Q96IT1 587 aaPredicted RBP25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms