RNA–Protein interactions for RNA: ENST00000503388.1

NDFIP1-202, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 2

Gene NDFIP1, Length 4,164 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-202ENST00000503388 PAK3O75914 559 aaPredicted RBP5.73□□□□□ -1.49
NDFIP1-202ENST00000503388 AMOTQ4VCS5 1084 aa5.73□□□□□ -1.49
NDFIP1-202ENST00000503388 CFAP70Q5T0N1 1121 aa5.73□□□□□ -1.49
NDFIP1-202ENST00000503388 SIRT1Q96EB6 747 aa5.73□□□□□ -1.49
NDFIP1-202ENST00000503388 TSPYL4Q9UJ04 414 aa5.73□□□□□ -1.49
NDFIP1-202ENST00000503388 ARAP2Q8WZ64 1704 aa5.73□□□□□ -1.49
NDFIP1-202ENST00000503388 NSD3Q9BZ95 1437 aa5.73□□□□□ -1.49
NDFIP1-202ENST00000503388 CAVIN2O95810 425 aa5.73□□□□□ -1.49
NDFIP1-202ENST00000503388 UBTFL1P0CB47 393 aaPredicted RBP5.73□□□□□ -1.49
NDFIP1-202ENST00000503388 TRDNQ13061 729 aa5.73□□□□□ -1.49
NDFIP1-202ENST00000503388 TRIM29Q14134 588 aa5.73□□□□□ -1.49
NDFIP1-202ENST00000503388 SAFB2Q14151 953 aaKnown RBP eCLIP5.73□□□□□ -1.49
NDFIP1-202ENST00000503388 CCDC70Q6NSX1 233 aa5.73□□□□□ -1.49
NDFIP1-202ENST00000503388 ZSCAN25Q6NSZ9 544 aa5.73□□□□□ -1.49
NDFIP1-202ENST00000503388 TXLNBQ8N3L3 684 aa5.73□□□□□ -1.49
NDFIP1-202ENST00000503388 NOL10Q9BSC4 688 aaKnown RBP5.73□□□□□ -1.49
NDFIP1-202ENST00000503388 CCDC39Q9UFE4 941 aa5.73□□□□□ -1.49
NDFIP1-202ENST00000503388 XBP1P17861 261 aa5.72□□□□□ -1.49
NDFIP1-202ENST00000503388 AKAP17AQ02040 695 aaKnown RBP5.72□□□□□ -1.49
NDFIP1-202ENST00000503388 NPHP1O15259 732 aa5.72□□□□□ -1.49
NDFIP1-202ENST00000503388 SF3A1Q15459 793 aaKnown RBP5.72□□□□□ -1.49
NDFIP1-202ENST00000503388 TSR1Q2NL82 804 aaKnown RBP5.72□□□□□ -1.49
NDFIP1-202ENST00000503388 H3BQV1 296 aa5.72□□□□□ -1.49
NDFIP1-202ENST00000503388 CCDC173Q0VFZ6 552 aa5.72□□□□□ -1.49
NDFIP1-202ENST00000503388 TWISTNBQ3B726 338 aaPredicted RBP5.72□□□□□ -1.49
NDFIP1-202ENST00000503388 IFFO2Q5TF58 517 aa5.72□□□□□ -1.49
NDFIP1-202ENST00000503388 JMYQ8N9B5 988 aa5.72□□□□□ -1.49
NDFIP1-202ENST00000503388 WDR33Q9C0J8 1336 aaKnown RBP5.72□□□□□ -1.49
NDFIP1-202ENST00000503388 KIF24Q5T7B8 1368 aa5.71□□□□□ -1.49
NDFIP1-202ENST00000503388 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.71□□□□□ -1.49
NDFIP1-202ENST00000503388 ACBD3Q9H3P7 528 aa5.71□□□□□ -1.49
NDFIP1-202ENST00000503388 SAFBQ15424 915 aaKnown RBP eCLIP5.71□□□□□ -1.5
NDFIP1-202ENST00000503388 SPG7Q9UQ90 795 aa5.71□□□□□ -1.5
NDFIP1-202ENST00000503388 SMC3Q9UQE7 1217 aa5.71□□□□□ -1.5
NDFIP1-202ENST00000503388 NFAT5O94916 1531 aa5.71□□□□□ -1.5
NDFIP1-202ENST00000503388 ATF3P18847 181 aa5.71□□□□□ -1.5
NDFIP1-202ENST00000503388 FKBP5Q13451 457 aaPredicted RBP5.71□□□□□ -1.5
NDFIP1-202ENST00000503388 SLC4A10Q6U841 1118 aa5.71□□□□□ -1.5
NDFIP1-202ENST00000503388 ZNF396Q96N95 335 aaPredicted RBP5.71□□□□□ -1.5
NDFIP1-202ENST00000503388 DDX60Q8IY21 1712 aaKnown RBP5.71□□□□□ -1.5
NDFIP1-202ENST00000503388 KIF2AO00139 706 aaPredicted RBP5.7□□□□□ -1.5
NDFIP1-202ENST00000503388 TRHP20396 242 aaPredicted RBP5.7□□□□□ -1.5
NDFIP1-202ENST00000503388 ANKLE2Q86XL3 938 aa5.7□□□□□ -1.5
NDFIP1-202ENST00000503388 CTNNA3Q9UI47 895 aa5.7□□□□□ -1.5
NDFIP1-202ENST00000503388 KDM3BQ7LBC6 1761 aa5.7□□□□□ -1.5
NDFIP1-202ENST00000503388 ARFGEF1Q9Y6D6 1849 aa5.7□□□□□ -1.5
NDFIP1-202ENST00000503388 SSH2Q76I76 1423 aa5.7□□□□□ -1.5
NDFIP1-202ENST00000503388 BECN2A8MW95 431 aa5.7□□□□□ -1.5
NDFIP1-202ENST00000503388 CCDC73Q6ZRK6 1079 aa5.7□□□□□ -1.5
NDFIP1-202ENST00000503388 CDK19Q9BWU1 502 aa5.7□□□□□ -1.5
NDFIP1-202ENST00000503388 SLKQ9H2G2 1235 aaPredicted RBP5.7□□□□□ -1.5
NDFIP1-202ENST00000503388 TULP4Q9NRJ4 1543 aa5.7□□□□□ -1.5
NDFIP1-202ENST00000503388 MCM5P33992 734 aa5.7□□□□□ -1.5
NDFIP1-202ENST00000503388 HDAC1Q13547 482 aaPredicted RBP5.7□□□□□ -1.5
NDFIP1-202ENST00000503388 SART3Q15020 963 aaKnown RBP5.7□□□□□ -1.5
NDFIP1-202ENST00000503388 BRMS1Q9HCU9 246 aa5.7□□□□□ -1.5
NDFIP1-202ENST00000503388 TMPOP42166 694 aaKnown RBP5.7□□□□□ -1.5
NDFIP1-202ENST00000503388 FAM43AQ8N2R8 423 aa5.7□□□□□ -1.5
NDFIP1-202ENST00000503388 PRAM1Q96QH2 718 aa5.7□□□□□ -1.5
NDFIP1-202ENST00000503388 DACH1Q9UI36 760 aa5.7□□□□□ -1.5
NDFIP1-202ENST00000503388 RTL1A6NKG5 1358 aa5.69□□□□□ -1.5
NDFIP1-202ENST00000503388 SCN11AQ9UI33 1791 aa5.69□□□□□ -1.5
NDFIP1-202ENST00000503388 ERICH2A1L162 156 aa5.69□□□□□ -1.5
NDFIP1-202ENST00000503388 HMGB1P09429 215 aaKnown RBP5.69□□□□□ -1.5
NDFIP1-202ENST00000503388 PRKAR2BP31323 418 aa5.69□□□□□ -1.5
NDFIP1-202ENST00000503388 TXNDC2Q86VQ3 553 aa5.69□□□□□ -1.5
NDFIP1-202ENST00000503388 PIAS4Q8N2W9 510 aaPredicted RBP5.69□□□□□ -1.5
NDFIP1-202ENST00000503388 SH2B1Q9NRF2 756 aaPredicted RBP5.69□□□□□ -1.5
NDFIP1-202ENST00000503388 A0A0U1RQG5 324 aaPredicted RBP5.69□□□□□ -1.5
NDFIP1-202ENST00000503388 CDKL5O76039 1030 aa5.69□□□□□ -1.5
NDFIP1-202ENST00000503388 IPO7O95373 1038 aaKnown RBP5.69□□□□□ -1.5
NDFIP1-202ENST00000503388 TATP17735 454 aaPredicted RBP5.69□□□□□ -1.5
NDFIP1-202ENST00000503388 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.69□□□□□ -1.5
NDFIP1-202ENST00000503388 K7ELQ4 463 aaPredicted RBP5.69□□□□□ -1.5
NDFIP1-202ENST00000503388 SLC3A2P08195 630 aaKnown RBP5.69□□□□□ -1.5
NDFIP1-202ENST00000503388 PLCB2Q00722 1185 aa5.69□□□□□ -1.5
NDFIP1-202ENST00000503388 NBPF1Q3BBV0 1214 aa5.69□□□□□ -1.5
NDFIP1-202ENST00000503388 PDCL2Q8N4E4 241 aa5.69□□□□□ -1.5
NDFIP1-202ENST00000503388 LRRCC1Q9C099 1032 aa5.69□□□□□ -1.5
NDFIP1-202ENST00000503388 ARGLU1Q9NWB6 273 aaPredicted RBP5.69□□□□□ -1.5
NDFIP1-202ENST00000503388 NAP1L2Q9ULW6 460 aaPredicted RBP5.69□□□□□ -1.5
NDFIP1-202ENST00000503388 PDZRN3Q9UPQ7 1066 aa5.69□□□□□ -1.5
NDFIP1-202ENST00000503388 TUBB4AP04350 444 aa5.68□□□□□ -1.5
NDFIP1-202ENST00000503388 ANAPC15P60006 121 aa5.68□□□□□ -1.5
NDFIP1-202ENST00000503388 SASS6Q6UVJ0 657 aa5.68□□□□□ -1.5
NDFIP1-202ENST00000503388 CHD1LQ86WJ1 897 aa5.68□□□□□ -1.5
NDFIP1-202ENST00000503388 TEX13AQ9BXU3 409 aaPredicted RBP5.68□□□□□ -1.5
NDFIP1-202ENST00000503388 GTPBP4Q9BZE4 634 aaKnown RBP5.68□□□□□ -1.5
NDFIP1-202ENST00000503388 TBC1D2BQ9UPU7 963 aa5.68□□□□□ -1.5
NDFIP1-202ENST00000503388 PLEKHG1Q9ULL1 1385 aa5.68□□□□□ -1.5
NDFIP1-202ENST00000503388 CPLX1O14810 134 aa5.68□□□□□ -1.5
NDFIP1-202ENST00000503388 CDR1P51861 262 aa5.68□□□□□ -1.5
NDFIP1-202ENST00000503388 EXOSC9Q06265 439 aaKnown RBP5.68□□□□□ -1.5
NDFIP1-202ENST00000503388 BMP2KLQ5H9B9 411 aa5.68□□□□□ -1.5
NDFIP1-202ENST00000503388 WASF1Q92558 559 aa5.68□□□□□ -1.5
NDFIP1-202ENST00000503388 RALYLQ86SE5 291 aaKnown RBP5.68□□□□□ -1.5
NDFIP1-202ENST00000503388 ERCC4Q92889 916 aaPredicted RBP5.68□□□□□ -1.5
NDFIP1-202ENST00000503388 RILPL2Q969X0 211 aa5.68□□□□□ -1.5
NDFIP1-202ENST00000503388 ARXQ96QS3 562 aa5.68□□□□□ -1.5
NDFIP1-202ENST00000503388 PYM1Q9BRP8 204 aaKnown RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms