RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 UTRNP46939 3433 aa22.11■■□□□ 1.13
SCLT1-204ENST00000503215 PLEKHG2Q9H7P9 1386 aa22.11■■□□□ 1.13
SCLT1-204ENST00000503215 ERVV-2B6SEH9 535 aa22.11■■□□□ 1.13
SCLT1-204ENST00000503215 ATP6V1AP38606 617 aa22.11■■□□□ 1.13
SCLT1-204ENST00000503215 AMOTQ4VCS5 1084 aa22.11■■□□□ 1.13
SCLT1-204ENST00000503215 KDRP35968 1356 aa22.1■■□□□ 1.13
SCLT1-204ENST00000503215 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.09■■□□□ 1.13
SCLT1-204ENST00000503215 HSP90AB1P08238 724 aaKnown RBP22.09■■□□□ 1.13
SCLT1-204ENST00000503215 HMOX1P09601 288 aa22.09■■□□□ 1.13
SCLT1-204ENST00000503215 CABP4P57796 275 aa22.08■■□□□ 1.12
SCLT1-204ENST00000503215 FLAD1Q8NFF5 587 aa22.07■■□□□ 1.12
SCLT1-204ENST00000503215 RBM42Q9BTD8 480 aaKnown RBP22.07■■□□□ 1.12
SCLT1-204ENST00000503215 C1orf141Q5JVX7 400 aa22.06■■□□□ 1.12
SCLT1-204ENST00000503215 GNPATO15228 680 aa22.05■■□□□ 1.12
SCLT1-204ENST00000503215 NFATC2IPQ8NCF5 419 aa22.05■■□□□ 1.12
SCLT1-204ENST00000503215 UBR3Q6ZT12 1888 aa22.05■■□□□ 1.12
SCLT1-204ENST00000503215 HMGB2P26583 209 aaKnown RBP22.04■■□□□ 1.12
SCLT1-204ENST00000503215 GPR162Q16538 588 aa22.04■■□□□ 1.12
SCLT1-204ENST00000503215 DIAPH1O60610 1272 aaKnown RBP22.03■■□□□ 1.12
SCLT1-204ENST00000503215 LGR6Q9HBX8 967 aa22.03■■□□□ 1.12
SCLT1-204ENST00000503215 NPC1L1Q9UHC9 1359 aa22.03■■□□□ 1.12
SCLT1-204ENST00000503215 SSFA2P28290 1259 aa22.02■■□□□ 1.12
SCLT1-204ENST00000503215 PELP1Q8IZL8 1130 aaKnown RBP22.02■■□□□ 1.12
SCLT1-204ENST00000503215 PTCD1O75127 700 aaKnown RBP22.01■■□□□ 1.11
SCLT1-204ENST00000503215 MTHFSDQ2M296 383 aaKnown RBP22■■□□□ 1.11
SCLT1-204ENST00000503215 GOLGB1Q14789 3259 aaKnown RBP22■■□□□ 1.11
SCLT1-204ENST00000503215 AKAP4Q5JQC9 854 aa21.99■■□□□ 1.11
SCLT1-204ENST00000503215 COL3A1P02461 1466 aaPredicted RBP21.99■■□□□ 1.11
SCLT1-204ENST00000503215 YBX3P16989 372 aaKnown RBP eCLIP21.99■■□□□ 1.111e-6■■□□□ 12
SCLT1-204ENST00000503215 RNMTO43148 476 aaKnown RBP21.97■■□□□ 1.11
SCLT1-204ENST00000503215 U2SURPO15042 1029 aaKnown RBP21.96■■□□□ 1.11
SCLT1-204ENST00000503215 RC3H1Q5TC82 1133 aaKnown RBP21.96■■□□□ 1.11
SCLT1-204ENST00000503215 RTCBQ9Y3I0 505 aaKnown RBP21.96■■□□□ 1.11
SCLT1-204ENST00000503215 CD2APQ9Y5K6 639 aa21.96■■□□□ 1.11
SCLT1-204ENST00000503215 SLC39A6Q13433 755 aa21.95■■□□□ 1.1
SCLT1-204ENST00000503215 TRAPPC3LQ5T215 181 aa21.95■■□□□ 1.1
SCLT1-204ENST00000503215 ZNF784Q8NCA9 323 aaPredicted RBP21.95■■□□□ 1.1
SCLT1-204ENST00000503215 ARHGEF1Q92888 912 aaKnown RBP21.95■■□□□ 1.1
SCLT1-204ENST00000503215 SLC52A2Q9HAB3 445 aa21.95■■□□□ 1.1
SCLT1-204ENST00000503215 CNTNAP4Q9C0A0 1308 aa21.94■■□□□ 1.1
SCLT1-204ENST00000503215 SCN11AQ9UI33 1791 aa21.94■■□□□ 1.1
SCLT1-204ENST00000503215 MYH14Q7Z406 1995 aaKnown RBP21.93■■□□□ 1.1
SCLT1-204ENST00000503215 RPS6KA4O75676 772 aa21.93■■□□□ 1.1
SCLT1-204ENST00000503215 WWC3Q9ULE0 1092 aa21.93■■□□□ 1.1
SCLT1-204ENST00000503215 MMP10P09238 476 aa21.92■■□□□ 1.1
SCLT1-204ENST00000503215 CRKLP46109 303 aaKnown RBP21.92■■□□□ 1.1
SCLT1-204ENST00000503215 ZNF831Q5JPB2 1677 aa21.92■■□□□ 1.1
SCLT1-204ENST00000503215 COL5A3P25940 1745 aaPredicted RBP21.91■■□□□ 1.1
SCLT1-204ENST00000503215 DNAJC10Q8IXB1 793 aa21.91■■□□□ 1.1
SCLT1-204ENST00000503215 INTS5Q6P9B9 1019 aaKnown RBP21.9■■□□□ 1.1
SCLT1-204ENST00000503215 CHD4Q14839 1912 aa21.9■■□□□ 1.1
SCLT1-204ENST00000503215 PPP2R1AP30153 589 aa21.89■■□□□ 1.1
SCLT1-204ENST00000503215 GYS1P13807 737 aa21.88■■□□□ 1.09
SCLT1-204ENST00000503215 ADRA2BP18089 450 aa21.88■■□□□ 1.09
SCLT1-204ENST00000503215 RFC4P35249 363 aa21.88■■□□□ 1.09
SCLT1-204ENST00000503215 PHACTR3Q96KR7 559 aa21.88■■□□□ 1.09
SCLT1-204ENST00000503215 SRP68Q9UHB9 627 aaKnown RBP21.88■■□□□ 1.09
SCLT1-204ENST00000503215 IL17REQ8NFR9 667 aa21.87■■□□□ 1.09
SCLT1-204ENST00000503215 MRC1P22897 1456 aa21.87■■□□□ 1.09
SCLT1-204ENST00000503215 TJP1Q07157 1748 aa21.87■■□□□ 1.09
SCLT1-204ENST00000503215 NLGN1Q8N2Q7 840 aa21.87■■□□□ 1.09
SCLT1-204ENST00000503215 GRIN3BO60391 1043 aa21.85■■□□□ 1.09
SCLT1-204ENST00000503215 CYP19A1P11511 503 aaPredicted RBP21.85■■□□□ 1.09
SCLT1-204ENST00000503215 PRKAR2BP31323 418 aa21.85■■□□□ 1.09
SCLT1-204ENST00000503215 RSPH6AQ9H0K4 717 aa21.85■■□□□ 1.09
SCLT1-204ENST00000503215 ADAMTS7Q9UKP4 1686 aa21.85■■□□□ 1.09
SCLT1-204ENST00000503215 KCPQ6ZWJ8 1503 aa21.84■■□□□ 1.09
SCLT1-204ENST00000503215 FKBP8Q14318 412 aa21.84■■□□□ 1.09
SCLT1-204ENST00000503215 CFAP53Q96M91 514 aa21.84■■□□□ 1.09
SCLT1-204ENST00000503215 VIRMAQ69YN4 1812 aaKnown RBP21.83■■□□□ 1.09
SCLT1-204ENST00000503215 GNAT3A8MTJ3 354 aa21.83■■□□□ 1.08
SCLT1-204ENST00000503215 GAS2L2Q8NHY3 880 aa21.83■■□□□ 1.08
SCLT1-204ENST00000503215 CCDC87Q9NVE4 849 aa21.83■■□□□ 1.08
SCLT1-204ENST00000503215 CICQ96RK0 1608 aaPredicted RBP21.81■■□□□ 1.08
SCLT1-204ENST00000503215 U2AF1L5P0DN76 240 aaPredicted RBP21.81■■□□□ 1.08
SCLT1-204ENST00000503215 U2AF1Q01081 240 aaKnown RBP eCLIP21.81■■□□□ 1.08
SCLT1-204ENST00000503215 C4AP0C0L4 1744 aa21.81■■□□□ 1.08
SCLT1-204ENST00000503215 USP42Q9H9J4 1324 aaKnown RBP21.81■■□□□ 1.08
SCLT1-204ENST00000503215 A0A0G2JLW4 131 aa21.8■■□□□ 1.08
SCLT1-204ENST00000503215 DDR1Q08345 913 aa21.8■■□□□ 1.08
SCLT1-204ENST00000503215 SOS1Q07889 1333 aaPredicted RBP21.8■■□□□ 1.08
SCLT1-204ENST00000503215 ZNF496Q96IT1 587 aaPredicted RBP21.79■■□□□ 1.08
SCLT1-204ENST00000503215 ZBTB1Q9Y2K1 713 aa21.79■■□□□ 1.08
SCLT1-204ENST00000503215 PXDNLA1KZ92 1463 aa21.79■■□□□ 1.08
SCLT1-204ENST00000503215 KCNQ3O43525 872 aa21.78■■□□□ 1.08
SCLT1-204ENST00000503215 NUDCQ9Y266 331 aa21.78■■□□□ 1.08
SCLT1-204ENST00000503215 PARP3Q9Y6F1 533 aa21.78■■□□□ 1.08
SCLT1-204ENST00000503215 TEFQ10587 303 aa21.77■■□□□ 1.08
SCLT1-204ENST00000503215 USPL1Q5W0Q7 1092 aa21.77■■□□□ 1.08
SCLT1-204ENST00000503215 C10orf71Q711Q0 1435 aa21.77■■□□□ 1.08
SCLT1-204ENST00000503215 DPEP1P16444 411 aa21.76■■□□□ 1.07
SCLT1-204ENST00000503215 ZNF790Q6PG37 636 aa21.76■■□□□ 1.07
SCLT1-204ENST00000503215 VSIG10Q8N0Z9 540 aa21.76■■□□□ 1.07
SCLT1-204ENST00000503215 CANXP27824 592 aaKnown RBP21.75■■□□□ 1.07
SCLT1-204ENST00000503215 TM4SF1P30408 202 aa21.75■■□□□ 1.07
SCLT1-204ENST00000503215 TTC5Q8N0Z6 440 aa21.75■■□□□ 1.07
SCLT1-204ENST00000503215 CEMIPQ8WUJ3 1361 aa21.75■■□□□ 1.07
SCLT1-204ENST00000503215 KIAA1551Q9HCM1 1747 aa21.75■■□□□ 1.07
SCLT1-204ENST00000503215 TGFB2P61812 414 aa21.74■■□□□ 1.07
SCLT1-204ENST00000503215 BCL2L12Q9HB09 334 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 196 ms