RNA–Protein interactions for RNA: ENST00000502943.1

PROM1-203, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-203ENST00000502943 CNKSR1Q969H4 720 aa9.02□□□□□ -0.97
PROM1-203ENST00000502943 ESF1Q9H501 851 aaKnown RBP9.02□□□□□ -0.97
PROM1-203ENST00000502943 NR1H3Q13133 447 aa9.01□□□□□ -0.97
PROM1-203ENST00000502943 UBAP2LQ14157 1087 aaKnown RBP9.01□□□□□ -0.97
PROM1-203ENST00000502943 EDARADDQ8WWZ3 215 aa9.01□□□□□ -0.97
PROM1-203ENST00000502943 ESYT1Q9BSJ8 1104 aa9.01□□□□□ -0.97
PROM1-203ENST00000502943 GRIN2CQ14957 1233 aa9□□□□□ -0.97
PROM1-203ENST00000502943 PCMTD1Q96MG8 357 aaPredicted RBP9□□□□□ -0.97
PROM1-203ENST00000502943 SUV39H2Q9H5I1 410 aa9□□□□□ -0.97
PROM1-203ENST00000502943 RUBCNLQ9H714 662 aa9□□□□□ -0.97
PROM1-203ENST00000502943 PHF24Q9UPV7 400 aa9□□□□□ -0.97
PROM1-203ENST00000502943 A0A1B0GTH6 734 aa8.99□□□□□ -0.97
PROM1-203ENST00000502943 C2CD2LO14523 706 aa8.99□□□□□ -0.97
PROM1-203ENST00000502943 GNRH1P01148 92 aa8.99□□□□□ -0.97
PROM1-203ENST00000502943 HOXB4P17483 251 aaPredicted RBP8.99□□□□□ -0.97
PROM1-203ENST00000502943 Q8N3U1 123 aa8.99□□□□□ -0.97
PROM1-203ENST00000502943 ZSCAN10Q96SZ4 725 aaPredicted RBP8.99□□□□□ -0.97
PROM1-203ENST00000502943 GDF2Q9UK05 429 aaPredicted RBP8.99□□□□□ -0.97
PROM1-203ENST00000502943 GPR37L1O60883 481 aa8.98□□□□□ -0.97
PROM1-203ENST00000502943 MCCD1P59942 119 aaPredicted RBP8.98□□□□□ -0.97
PROM1-203ENST00000502943 GOLGA6L1Q8N7Z2 621 aa8.98□□□□□ -0.97
PROM1-203ENST00000502943 ABHD17AQ96GS6 310 aa8.98□□□□□ -0.97
PROM1-203ENST00000502943 CDCA7Q9BWT1 371 aaPredicted RBP8.98□□□□□ -0.97
PROM1-203ENST00000502943 HRH3Q9Y5N1 445 aa8.98□□□□□ -0.97
PROM1-203ENST00000502943 BMP4P12644 408 aa8.97□□□□□ -0.97
PROM1-203ENST00000502943 C4orf17Q53FE4 359 aa8.97□□□□□ -0.97
PROM1-203ENST00000502943 LINC00114Q6XXX2 140 aa8.97□□□□□ -0.97
PROM1-203ENST00000502943 ALYREFQ86V81 257 aaKnown RBP8.97□□□□□ -0.97
PROM1-203ENST00000502943 FHDC1Q9C0D6 1143 aaPredicted RBP8.97□□□□□ -0.97
PROM1-203ENST00000502943 AMPD1P23109 780 aa8.96□□□□□ -0.98
PROM1-203ENST00000502943 MSX1P28360 303 aa8.96□□□□□ -0.98
PROM1-203ENST00000502943 GNASQ5JWF2 1037 aa8.96□□□□□ -0.98
PROM1-203ENST00000502943 TMEM214Q6NUQ4 689 aaKnown RBP8.96□□□□□ -0.98
PROM1-203ENST00000502943 CCDC85AQ96PX6 553 aaPredicted RBP8.96□□□□□ -0.98
PROM1-203ENST00000502943 GOPCQ9HD26 462 aa8.96□□□□□ -0.98
PROM1-203ENST00000502943 GGA1Q9UJY5 639 aa8.96□□□□□ -0.98
PROM1-203ENST00000502943 CSB-PGBD3P0DP91 1061 aa8.95□□□□□ -0.98
PROM1-203ENST00000502943 SLCO4C1Q6ZQN7 724 aa8.95□□□□□ -0.98
PROM1-203ENST00000502943 PGBD3Q8N328 593 aa8.95□□□□□ -0.98
PROM1-203ENST00000502943 XAGE2Q96GT9 111 aa8.95□□□□□ -0.98
PROM1-203ENST00000502943 KRTAP4-8Q9BYQ9 185 aa8.95□□□□□ -0.98
PROM1-203ENST00000502943 ATXN7L1Q9ULK2 861 aaPredicted RBP8.95□□□□□ -0.98
PROM1-203ENST00000502943 ZNF330Q9Y3S2 320 aaPredicted RBP8.95□□□□□ -0.98
PROM1-203ENST00000502943 FGFR3P22607 806 aa8.94□□□□□ -0.98
PROM1-203ENST00000502943 CTBSQ01459 385 aa8.94□□□□□ -0.98
PROM1-203ENST00000502943 LBRQ14739 615 aaKnown RBP8.94□□□□□ -0.98
PROM1-203ENST00000502943 ZNF592Q92610 1267 aa8.94□□□□□ -0.98
PROM1-203ENST00000502943 C1QTNF9BB2RNN3 333 aa8.93□□□□□ -0.98
PROM1-203ENST00000502943 BNIP3LO60238 219 aa8.93□□□□□ -0.98
PROM1-203ENST00000502943 STAU1O95793 577 aaKnown RBP8.93□□□□□ -0.98
PROM1-203ENST00000502943 MYCP01106 439 aaPredicted RBP8.93□□□□□ -0.98
PROM1-203ENST00000502943 GTF2E1P29083 439 aaPredicted RBP8.93□□□□□ -0.98
PROM1-203ENST00000502943 EFHC2Q5JST6 749 aa8.93□□□□□ -0.98
PROM1-203ENST00000502943 NDFIP2Q9NV92 336 aa8.93□□□□□ -0.98
PROM1-203ENST00000502943 CD163Q86VB7 1156 aa8.92□□□□□ -0.98
PROM1-203ENST00000502943 GNB5O14775 395 aa8.91□□□□□ -0.98
PROM1-203ENST00000502943 BTBD6Q96KE9 485 aa8.91□□□□□ -0.98
PROM1-203ENST00000502943 CEP126Q9P2H0 1117 aa8.91□□□□□ -0.98
PROM1-203ENST00000502943 EPXP11678 715 aa8.9□□□□□ -0.98
PROM1-203ENST00000502943 CHRNA4P43681 627 aa8.9□□□□□ -0.98
PROM1-203ENST00000502943 MTMR14Q8NCE2 650 aa8.9□□□□□ -0.98
PROM1-203ENST00000502943 DGKGP49619 791 aa8.89□□□□□ -0.99
PROM1-203ENST00000502943 RNF135Q8IUD6 432 aa8.89□□□□□ -0.99
PROM1-203ENST00000502943 RHBDD1Q8TEB9 315 aa8.89□□□□□ -0.99
PROM1-203ENST00000502943 ETNK1Q9HBU6 452 aa8.89□□□□□ -0.99
PROM1-203ENST00000502943 NDUFB9Q9Y6M9 179 aa8.89□□□□□ -0.99
PROM1-203ENST00000502943 NEURL1BA8MQ27 555 aa8.88□□□□□ -0.99
PROM1-203ENST00000502943 TSGA10IPQ3SY00 556 aa8.88□□□□□ -0.99
PROM1-203ENST00000502943 ESCO1Q5FWF5 840 aa8.88□□□□□ -0.99
PROM1-203ENST00000502943 PPARGC1BQ86YN6 1023 aaKnown RBP8.88□□□□□ -0.99
PROM1-203ENST00000502943 CRISPLD1Q9H336 500 aa8.88□□□□□ -0.99
PROM1-203ENST00000502943 DNAAF2Q9NVR5 837 aaKnown RBP8.88□□□□□ -0.99
PROM1-203ENST00000502943 ARAFP10398 606 aa8.87□□□□□ -0.99
PROM1-203ENST00000502943 ITGB7P26010 798 aa8.87□□□□□ -0.99
PROM1-203ENST00000502943 PLA2G4AP47712 749 aa8.87□□□□□ -0.99
PROM1-203ENST00000502943 TLR1Q15399 786 aa8.87□□□□□ -0.99
PROM1-203ENST00000502943 IL27Q8NEV9 243 aa8.87□□□□□ -0.99
PROM1-203ENST00000502943 PIK3R2O00459 728 aa8.86□□□□□ -0.99
PROM1-203ENST00000502943 ZCCHC2Q9C0B9 1178 aaKnown RBP8.86□□□□□ -0.99
PROM1-203ENST00000502943 HCN2Q9UL51 889 aa8.86□□□□□ -0.99
PROM1-203ENST00000502943 TBC1D9Q6ZT07 1266 aa8.85□□□□□ -0.99
PROM1-203ENST00000502943 CHSY3Q70JA7 882 aa8.85□□□□□ -0.99
PROM1-203ENST00000502943 SNRKQ9NRH2 765 aa8.85□□□□□ -0.99
PROM1-203ENST00000502943 ATP4AP20648 1035 aa8.84□□□□□ -0.99
PROM1-203ENST00000502943 DOC2BQ14184 412 aa8.84□□□□□ -0.99
PROM1-203ENST00000502943 BANK1Q8NDB2 785 aa8.84□□□□□ -0.99
PROM1-203ENST00000502943 PSMG3-AS1Q96PY0 264 aa8.84□□□□□ -0.99
PROM1-203ENST00000502943 NOP53Q9NZM5 478 aaKnown RBP8.84□□□□□ -0.99
PROM1-203ENST00000502943 KLF15Q9UIH9 416 aa8.84□□□□□ -0.99
PROM1-203ENST00000502943 DOLKQ9UPQ8 538 aa8.84□□□□□ -0.99
PROM1-203ENST00000502943 PCDHGC4Q9Y5F7 938 aa8.84□□□□□ -0.99
PROM1-203ENST00000502943 SOCS7O14512 581 aa8.83□□□□□ -1
PROM1-203ENST00000502943 FIGNL1Q6PIW4 674 aa8.83□□□□□ -1
PROM1-203ENST00000502943 SEMA6BQ9H3T3 888 aa8.83□□□□□ -1
PROM1-203ENST00000502943 DCDC2BA2VCK2 349 aa8.82□□□□□ -1
PROM1-203ENST00000502943 ATXN7O15265 892 aaPredicted RBP8.82□□□□□ -1
PROM1-203ENST00000502943 CD33P20138 364 aa8.82□□□□□ -1
PROM1-203ENST00000502943 ADH6P28332 368 aa8.81□□□□□ -1
PROM1-203ENST00000502943 USP4Q13107 963 aa8.81□□□□□ -1
PROM1-203ENST00000502943 OXLD1Q5BKU9 147 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms