RNA–Protein interactions for RNA: ENST00000502734.1

COPB2-202, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 2

Gene COPB2, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-202ENST00000502734 SSFA2P28290 1259 aa12.27□□□□□ -0.45
COPB2-202ENST00000502734 IL13P35225 146 aa12.27□□□□□ -0.45
COPB2-202ENST00000502734 MTHFSP49914 203 aa12.27□□□□□ -0.45
COPB2-202ENST00000502734 CABP4P57796 275 aa12.27□□□□□ -0.45
COPB2-202ENST00000502734 SULT6B1Q6IMI4 303 aa12.27□□□□□ -0.45
COPB2-202ENST00000502734 AEBP1Q8IUX7 1158 aa12.27□□□□□ -0.45
COPB2-202ENST00000502734 PELP1Q8IZL8 1130 aaKnown RBP12.27□□□□□ -0.45
COPB2-202ENST00000502734 LINC00116Q8NCU8 138 aa12.27□□□□□ -0.45
COPB2-202ENST00000502734 NLGN2Q8NFZ4 835 aa12.27□□□□□ -0.45
COPB2-202ENST00000502734 PHF14O94880 888 aa12.26□□□□□ -0.45
COPB2-202ENST00000502734 ITPK1Q13572 414 aa12.26□□□□□ -0.45
COPB2-202ENST00000502734 C1orf141Q5JVX7 400 aa12.26□□□□□ -0.45
COPB2-202ENST00000502734 SMIM5Q71RC9 77 aa12.26□□□□□ -0.45
COPB2-202ENST00000502734 AMIGO3Q86WK7 504 aa12.26□□□□□ -0.45
COPB2-202ENST00000502734 RBM42Q9BTD8 480 aaKnown RBP12.26□□□□□ -0.45
COPB2-202ENST00000502734 CD2APQ9Y5K6 639 aa12.26□□□□□ -0.45
COPB2-202ENST00000502734 ZNF784Q8NCA9 323 aaPredicted RBP12.25□□□□□ -0.45
COPB2-202ENST00000502734 QSER1Q2KHR3 1735 aa12.25□□□□□ -0.45
COPB2-202ENST00000502734 PKD1L3Q7Z443 1732 aa12.25□□□□□ -0.45
COPB2-202ENST00000502734 ANKRD26Q9UPS8 1709 aa12.25□□□□□ -0.45
COPB2-202ENST00000502734 GNPATO15228 680 aa12.24□□□□□ -0.45
COPB2-202ENST00000502734 GRIN3BO60391 1043 aa12.24□□□□□ -0.45
COPB2-202ENST00000502734 CC2D1BQ5T0F9 858 aaKnown RBP12.24□□□□□ -0.45
COPB2-202ENST00000502734 NFATC2IPQ8NCF5 419 aa12.24□□□□□ -0.45
COPB2-202ENST00000502734 TRAPPC3LQ5T215 181 aa12.23□□□□□ -0.45
COPB2-202ENST00000502734 RC3H1Q5TC82 1133 aaKnown RBP12.23□□□□□ -0.45
COPB2-202ENST00000502734 SLC4A9Q96Q91 983 aa12.23□□□□□ -0.45
COPB2-202ENST00000502734 RTCBQ9Y3I0 505 aaKnown RBP12.23□□□□□ -0.45
COPB2-202ENST00000502734 ITGB4P16144 1822 aa12.23□□□□□ -0.45
COPB2-202ENST00000502734 GOLGB1Q14789 3259 aaKnown RBP12.22□□□□□ -0.45
COPB2-202ENST00000502734 TOGARAM1Q9Y4F4 1720 aa12.21□□□□□ -0.45
COPB2-202ENST00000502734 DIAPH1O60610 1272 aaKnown RBP12.21□□□□□ -0.45
COPB2-202ENST00000502734 PTCD1O75127 700 aaKnown RBP12.21□□□□□ -0.45
COPB2-202ENST00000502734 YBX3P16989 372 aaKnown RBP eCLIP12.21□□□□□ -0.45
COPB2-202ENST00000502734 AKAP4Q5JQC9 854 aa12.21□□□□□ -0.45
COPB2-202ENST00000502734 ARHGEF1Q92888 912 aaKnown RBP12.21□□□□□ -0.45
COPB2-202ENST00000502734 TUBGCP6Q96RT7 1819 aa12.21□□□□□ -0.46
COPB2-202ENST00000502734 COL24A1Q17RW2 1714 aa12.2□□□□□ -0.46
COPB2-202ENST00000502734 KDRP35968 1356 aa12.2□□□□□ -0.46
COPB2-202ENST00000502734 RPS6KA4O75676 772 aa12.2□□□□□ -0.46
COPB2-202ENST00000502734 HMOX1P09601 288 aa12.2□□□□□ -0.46
COPB2-202ENST00000502734 NLGN1Q8N2Q7 840 aa12.2□□□□□ -0.46
COPB2-202ENST00000502734 C4BP0C0L5 1744 aa12.2□□□□□ -0.46
COPB2-202ENST00000502734 C5P01031 1676 aa12.19□□□□□ -0.46
COPB2-202ENST00000502734 RFC4P35249 363 aa12.19□□□□□ -0.46
COPB2-202ENST00000502734 CNGB1Q14028 1251 aaPredicted RBP12.19□□□□□ -0.46
COPB2-202ENST00000502734 LGR6Q9HBX8 967 aa12.19□□□□□ -0.46
COPB2-202ENST00000502734 KDM6AO15550 1401 aaPredicted RBP12.19□□□□□ -0.46
COPB2-202ENST00000502734 TAF1LQ8IZX4 1826 aa12.18□□□□□ -0.46
COPB2-202ENST00000502734 RNMTO43148 476 aaKnown RBP12.18□□□□□ -0.46
COPB2-202ENST00000502734 MMP10P09238 476 aa12.18□□□□□ -0.46
COPB2-202ENST00000502734 SLC52A2Q9HAB3 445 aa12.18□□□□□ -0.46
COPB2-202ENST00000502734 CNTNAP4Q9C0A0 1308 aa12.17□□□□□ -0.46
COPB2-202ENST00000502734 MTHFSDQ2M296 383 aaKnown RBP12.17□□□□□ -0.46
COPB2-202ENST00000502734 NPC1L1Q9UHC9 1359 aa12.17□□□□□ -0.46
COPB2-202ENST00000502734 CRKLP46109 303 aaKnown RBP12.16□□□□□ -0.46
COPB2-202ENST00000502734 CHD4Q14839 1912 aa12.15□□□□□ -0.46
COPB2-202ENST00000502734 U2SURPO15042 1029 aaKnown RBP12.15□□□□□ -0.46
COPB2-202ENST00000502734 GYS1P13807 737 aa12.15□□□□□ -0.46
COPB2-202ENST00000502734 TGFB2P61812 414 aa12.15□□□□□ -0.46
COPB2-202ENST00000502734 UBR3Q6ZT12 1888 aa12.14□□□□□ -0.47
COPB2-202ENST00000502734 SLC39A6Q13433 755 aa12.14□□□□□ -0.47
COPB2-202ENST00000502734 INTS5Q6P9B9 1019 aaKnown RBP12.14□□□□□ -0.47
COPB2-202ENST00000502734 PARP3Q9Y6F1 533 aa12.14□□□□□ -0.47
COPB2-202ENST00000502734 DNAJC10Q8IXB1 793 aa12.13□□□□□ -0.47
COPB2-202ENST00000502734 CCDC87Q9NVE4 849 aa12.13□□□□□ -0.47
COPB2-202ENST00000502734 WWC3Q9ULE0 1092 aa12.13□□□□□ -0.47
COPB2-202ENST00000502734 C1QTNF8P60827 252 aa12.12□□□□□ -0.47
COPB2-202ENST00000502734 GAS2L2Q8NHY3 880 aa12.12□□□□□ -0.47
COPB2-202ENST00000502734 CFAP53Q96M91 514 aa12.12□□□□□ -0.47
COPB2-202ENST00000502734 A0A0G2JLW4 131 aa12.11□□□□□ -0.47
COPB2-202ENST00000502734 GNAT3A8MTJ3 354 aa12.11□□□□□ -0.47
COPB2-202ENST00000502734 ZPR1O75312 459 aa12.11□□□□□ -0.47
COPB2-202ENST00000502734 CYP19A1P11511 503 aaPredicted RBP12.11□□□□□ -0.47
COPB2-202ENST00000502734 VSIG10Q8N0Z9 540 aa12.11□□□□□ -0.47
COPB2-202ENST00000502734 IL17REQ8NFR9 667 aa12.11□□□□□ -0.47
COPB2-202ENST00000502734 SRP68Q9UHB9 627 aaKnown RBP12.11□□□□□ -0.47
COPB2-202ENST00000502734 NUDCQ9Y266 331 aa12.11□□□□□ -0.47
COPB2-202ENST00000502734 GIGYF1O75420 1035 aaPredicted RBP12.1□□□□□ -0.47
COPB2-202ENST00000502734 SLC4A2P04920 1241 aa12.1□□□□□ -0.47
COPB2-202ENST00000502734 FKBP8Q14318 412 aa12.1□□□□□ -0.47
COPB2-202ENST00000502734 U3KPZ7 1027 aaPredicted RBP12.1□□□□□ -0.47
COPB2-202ENST00000502734 DPEP1P16444 411 aa12.09□□□□□ -0.47
COPB2-202ENST00000502734 TM4SF1P30408 202 aa12.09□□□□□ -0.47
COPB2-202ENST00000502734 TEFQ10587 303 aa12.09□□□□□ -0.47
COPB2-202ENST00000502734 TTC5Q8N0Z6 440 aa12.09□□□□□ -0.47
COPB2-202ENST00000502734 BCS1LQ9Y276 419 aa12.09□□□□□ -0.47
COPB2-202ENST00000502734 ZNF831Q5JPB2 1677 aa12.09□□□□□ -0.47
COPB2-202ENST00000502734 USP42Q9H9J4 1324 aaKnown RBP12.09□□□□□ -0.47
COPB2-202ENST00000502734 STARD3NLO95772 234 aa12.08□□□□□ -0.48
COPB2-202ENST00000502734 PPP2R1AP30153 589 aa12.08□□□□□ -0.48
COPB2-202ENST00000502734 USPL1Q5W0Q7 1092 aa12.08□□□□□ -0.48
COPB2-202ENST00000502734 PHACTR3Q96KR7 559 aa12.08□□□□□ -0.48
COPB2-202ENST00000502734 TEX13AQ9BXU3 409 aaPredicted RBP12.08□□□□□ -0.48
COPB2-202ENST00000502734 NARFQ9UHQ1 456 aa12.08□□□□□ -0.48
COPB2-202ENST00000502734 MYH14Q7Z406 1995 aaKnown RBP12.08□□□□□ -0.48
COPB2-202ENST00000502734 SOS1Q07889 1333 aaPredicted RBP12.08□□□□□ -0.48
COPB2-202ENST00000502734 FCHSD2O94868 740 aa12.07□□□□□ -0.48
COPB2-202ENST00000502734 U2AF1L5P0DN76 240 aaPredicted RBP12.07□□□□□ -0.48
COPB2-202ENST00000502734 KCNA3P22001 575 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms