RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 NFAT5O94916 1531 aa20.42■□□□□ 0.86
VCAN-204ENST00000502527 PDE1AP54750 535 aa20.42■□□□□ 0.86
VCAN-204ENST00000502527 ATP8B2P98198 1209 aa20.42■□□□□ 0.86
VCAN-204ENST00000502527 RAB3GAP1Q15042 981 aa20.42■□□□□ 0.86
VCAN-204ENST00000502527 ESCO1Q5FWF5 840 aa20.42■□□□□ 0.86
VCAN-204ENST00000502527 PXDNLA1KZ92 1463 aa20.42■□□□□ 0.86
VCAN-204ENST00000502527 CEMIPQ8WUJ3 1361 aa20.41■□□□□ 0.86
VCAN-204ENST00000502527 REC8O95072 547 aa20.41■□□□□ 0.86
VCAN-204ENST00000502527 TNPO1Q92973 898 aaKnown RBP20.41■□□□□ 0.86
VCAN-204ENST00000502527 GBP4Q96PP9 640 aa20.41■□□□□ 0.86
VCAN-204ENST00000502527 HDGFL1Q5TGJ6 251 aa20.41■□□□□ 0.86
VCAN-204ENST00000502527 CHMP4AQ9BY43 222 aa20.41■□□□□ 0.86
VCAN-204ENST00000502527 LRRCC1Q9C099 1032 aa20.41■□□□□ 0.86
VCAN-204ENST00000502527 NBPF6Q5VWK0 638 aa20.4■□□□□ 0.86
VCAN-204ENST00000502527 NBPF4Q96M43 638 aa20.4■□□□□ 0.86
VCAN-204ENST00000502527 RBM33Q96EV2 1170 aaKnown RBP20.39■□□□□ 0.86
VCAN-204ENST00000502527 EXOC6BQ9Y2D4 811 aa20.39■□□□□ 0.86
VCAN-204ENST00000502527 LTN1O94822 1766 aa20.39■□□□□ 0.85
VCAN-204ENST00000502527 ZNF142P52746 1687 aaPredicted RBP20.38■□□□□ 0.85
VCAN-204ENST00000502527 ERC2O15083 957 aa20.38■□□□□ 0.85
VCAN-204ENST00000502527 CACNA1FO60840 1977 aa20.38■□□□□ 0.85
VCAN-204ENST00000502527 HOXB7P09629 217 aa20.38■□□□□ 0.85
VCAN-204ENST00000502527 PTMSP20962 102 aa20.38■□□□□ 0.85
VCAN-204ENST00000502527 PNMA6EA0A0J9YXQ4 647 aa20.37■□□□□ 0.85
VCAN-204ENST00000502527 FOXD4L1Q9NU39 408 aa20.37■□□□□ 0.85
VCAN-204ENST00000502527 LRRFIP2Q9Y608 721 aaKnown RBP20.37■□□□□ 0.85
VCAN-204ENST00000502527 IBTKQ9P2D0 1353 aaPredicted RBP20.36■□□□□ 0.85
VCAN-204ENST00000502527 SALL3Q9BXA9 1300 aa20.36■□□□□ 0.85
VCAN-204ENST00000502527 UBTFL1P0CB47 393 aaPredicted RBP20.36■□□□□ 0.85
VCAN-204ENST00000502527 USP44Q9H0E7 712 aa20.36■□□□□ 0.85
VCAN-204ENST00000502527 GOLGA6L3A6NEY3 463 aa20.36■□□□□ 0.85
VCAN-204ENST00000502527 EIF4A1P60842 406 aaKnown RBP20.36■□□□□ 0.85
VCAN-204ENST00000502527 ZBTB7CA1YPR0 619 aa20.35■□□□□ 0.85
VCAN-204ENST00000502527 MX1P20591 662 aa20.35■□□□□ 0.85
VCAN-204ENST00000502527 GZF1Q9H116 711 aaPredicted RBP20.35■□□□□ 0.85
VCAN-204ENST00000502527 MED1Q15648 1581 aaPredicted RBP20.35■□□□□ 0.85
VCAN-204ENST00000502527 PLEKHO1Q53GL0 409 aaPredicted RBP20.34■□□□□ 0.85
VCAN-204ENST00000502527 AKAP4Q5JQC9 854 aa20.34■□□□□ 0.85
VCAN-204ENST00000502527 SRCIN1Q9C0H9 1055 aa20.34■□□□□ 0.85
VCAN-204ENST00000502527 LGR6Q9HBX8 967 aa20.34■□□□□ 0.85
VCAN-204ENST00000502527 FSD2A1L4K1 749 aa20.34■□□□□ 0.85
VCAN-204ENST00000502527 ST18O60284 1047 aa20.34■□□□□ 0.85
VCAN-204ENST00000502527 AMOTQ4VCS5 1084 aa20.34■□□□□ 0.85
VCAN-204ENST00000502527 PHAXQ9H814 394 aaKnown RBP20.34■□□□□ 0.85
VCAN-204ENST00000502527 N4BP2Q86UW6 1770 aaPredicted RBP20.34■□□□□ 0.85
VCAN-204ENST00000502527 PHRF1Q9P1Y6 1649 aaKnown RBP20.34■□□□□ 0.85
VCAN-204ENST00000502527 EIF2S2P20042 333 aaKnown RBP20.33■□□□□ 0.84
VCAN-204ENST00000502527 TEFQ10587 303 aa20.33■□□□□ 0.84
VCAN-204ENST00000502527 SKOR2Q2VWA4 1001 aaPredicted RBP20.33■□□□□ 0.84
VCAN-204ENST00000502527 ZNF530Q6P9A1 599 aaPredicted RBP20.33■□□□□ 0.84
VCAN-204ENST00000502527 RTN4Q9NQC3 1192 aaKnown RBP20.33■□□□□ 0.84
VCAN-204ENST00000502527 STAP2Q9UGK3 403 aa20.33■□□□□ 0.84
VCAN-204ENST00000502527 NPHP4O75161 1426 aaPredicted RBP20.32■□□□□ 0.84
VCAN-204ENST00000502527 GCP02774 474 aa20.31■□□□□ 0.84
VCAN-204ENST00000502527 SSH3Q8TE77 659 aa20.31■□□□□ 0.84
VCAN-204ENST00000502527 CLEC17AQ6ZS10 378 aa20.31■□□□□ 0.84
VCAN-204ENST00000502527 ARHGEF25Q86VW2 580 aa20.31■□□□□ 0.84
VCAN-204ENST00000502527 LRRC59Q96AG4 307 aaKnown RBP20.31■□□□□ 0.84
VCAN-204ENST00000502527 AOX1Q06278 1338 aa20.3■□□□□ 0.84
VCAN-204ENST00000502527 BTBD11A6QL63 1104 aa20.3■□□□□ 0.84
VCAN-204ENST00000502527 RAB11FIP3O75154 756 aa20.3■□□□□ 0.84
VCAN-204ENST00000502527 CHPF2Q9P2E5 772 aa20.3■□□□□ 0.84
VCAN-204ENST00000502527 TSHZ3Q63HK5 1081 aa20.29■□□□□ 0.84
VCAN-204ENST00000502527 ORAI2Q96SN7 254 aa20.29■□□□□ 0.84
VCAN-204ENST00000502527 ESYT1Q9BSJ8 1104 aa20.29■□□□□ 0.84
VCAN-204ENST00000502527 CWC22Q9HCG8 908 aaKnown RBP20.29■□□□□ 0.84
VCAN-204ENST00000502527 NCAPD2Q15021 1401 aa20.29■□□□□ 0.84
VCAN-204ENST00000502527 GOLGA6L22H0YM25 854 aa20.28■□□□□ 0.84
VCAN-204ENST00000502527 SSFA2P28290 1259 aa20.28■□□□□ 0.84
VCAN-204ENST00000502527 NUCB2P80303 420 aa20.28■□□□□ 0.84
VCAN-204ENST00000502527 C1orf141Q5JVX7 400 aa20.28■□□□□ 0.84
VCAN-204ENST00000502527 DNAAF4Q8WXU2 420 aa20.28■□□□□ 0.84
VCAN-204ENST00000502527 ISY1Q9ULR0 285 aaKnown RBP20.28■□□□□ 0.84
VCAN-204ENST00000502527 POLA2Q14181 598 aa20.28■□□□□ 0.84
VCAN-204ENST00000502527 MPRIPQ6WCQ1 1025 aa20.28■□□□□ 0.84
VCAN-204ENST00000502527 SLIT3O75094 1523 aa20.28■□□□□ 0.84
VCAN-204ENST00000502527 KDM3BQ7LBC6 1761 aa20.28■□□□□ 0.84
VCAN-204ENST00000502527 LMO7Q8WWI1 1683 aa20.28■□□□□ 0.84
VCAN-204ENST00000502527 TRIM6-TRIM34B2RNG4 842 aa20.27■□□□□ 0.84
VCAN-204ENST00000502527 PPP1R42Q7Z4L9 355 aa20.27■□□□□ 0.84
VCAN-204ENST00000502527 OVOS2A0A0G2JMS6 1433 aa20.27■□□□□ 0.84
VCAN-204ENST00000502527 RNMTO43148 476 aaKnown RBP20.26■□□□□ 0.83
VCAN-204ENST00000502527 KCNQ3O43525 872 aa20.26■□□□□ 0.83
VCAN-204ENST00000502527 XRCC6P12956 609 aaKnown RBP eCLIP20.26■□□□□ 0.83
VCAN-204ENST00000502527 BEND3Q5T5X7 828 aa20.26■□□□□ 0.83
VCAN-204ENST00000502527 RILPL2Q969X0 211 aa20.26■□□□□ 0.83
VCAN-204ENST00000502527 PI4KAP2A4QPH2 592 aa20.26■□□□□ 0.83
VCAN-204ENST00000502527 MCCP23508 829 aa20.26■□□□□ 0.83
VCAN-204ENST00000502527 CHMLP26374 656 aa20.26■□□□□ 0.83
VCAN-204ENST00000502527 PI4KAP1Q8N8J0 262 aa20.26■□□□□ 0.83
VCAN-204ENST00000502527 ANKRD24Q8TF21 1146 aa20.26■□□□□ 0.83
VCAN-204ENST00000502527 SURF6O75683 361 aaKnown RBP20.25■□□□□ 0.83
VCAN-204ENST00000502527 MRE11P49959 708 aa20.25■□□□□ 0.83
VCAN-204ENST00000502527 XPCQ01831 940 aaPredicted RBP20.25■□□□□ 0.83
VCAN-204ENST00000502527 DBF4Q9UBU7 674 aaPredicted RBP20.25■□□□□ 0.83
VCAN-204ENST00000502527 ADAMTSL3P82987 1691 aa20.25■□□□□ 0.83
VCAN-204ENST00000502527 SETD1BQ9UPS6 1966 aaKnown RBP20.25■□□□□ 0.83
VCAN-204ENST00000502527 LMOD2Q6P5Q4 547 aa20.25■□□□□ 0.83
VCAN-204ENST00000502527 SRGAP3O43295 1099 aa20.23■□□□□ 0.83
VCAN-204ENST00000502527 BAG4O95429 457 aaKnown RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms