RNA–Protein interactions for RNA: ENST00000502393.5

SFXN1-203, Transcript of sideroflexin 1, humanhuman

TSL 2 BASIC

Gene SFXN1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-203ENST00000502393 MSL1Q68DK7 614 aa26.78■■□□□ 1.88
SFXN1-203ENST00000502393 SSFA2P28290 1259 aa26.77■■□□□ 1.88
SFXN1-203ENST00000502393 ITPK1Q13572 414 aa26.77■■□□□ 1.88
SFXN1-203ENST00000502393 CC2D1BQ5T0F9 858 aaKnown RBP26.77■■□□□ 1.88
SFXN1-203ENST00000502393 KDM6AO15550 1401 aaPredicted RBP26.76■■□□□ 1.87
SFXN1-203ENST00000502393 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.76■■□□□ 1.87
SFXN1-203ENST00000502393 CABP4P57796 275 aa26.76■■□□□ 1.87
SFXN1-203ENST00000502393 AMIGO3Q86WK7 504 aa26.76■■□□□ 1.87
SFXN1-203ENST00000502393 NPC1L1Q9UHC9 1359 aa26.75■■□□□ 1.87
SFXN1-203ENST00000502393 UBR3Q6ZT12 1888 aa26.75■■□□□ 1.87
SFXN1-203ENST00000502393 PHF14O94880 888 aa26.75■■□□□ 1.87
SFXN1-203ENST00000502393 GPR162Q16538 588 aa26.75■■□□□ 1.87
SFXN1-203ENST00000502393 NLGN2Q8NFZ4 835 aa26.73■■□□□ 1.87
SFXN1-203ENST00000502393 GNPATO15228 680 aa26.72■■□□□ 1.87
SFXN1-203ENST00000502393 ZNF831Q5JPB2 1677 aa26.71■■□□□ 1.87
SFXN1-203ENST00000502393 SMIM5Q71RC9 77 aa26.71■■□□□ 1.87
SFXN1-203ENST00000502393 RBM42Q9BTD8 480 aaKnown RBP26.71■■□□□ 1.87
SFXN1-203ENST00000502393 GOLGB1Q14789 3259 aaKnown RBP26.7■■□□□ 1.87
SFXN1-203ENST00000502393 DIAPH1O60610 1272 aaKnown RBP26.7■■□□□ 1.86
SFXN1-203ENST00000502393 SLC4A9Q96Q91 983 aa26.7■■□□□ 1.86
SFXN1-203ENST00000502393 CD2APQ9Y5K6 639 aa26.7■■□□□ 1.86
SFXN1-203ENST00000502393 AKAP4Q5JQC9 854 aa26.69■■□□□ 1.86
SFXN1-203ENST00000502393 NFATC2IPQ8NCF5 419 aa26.69■■□□□ 1.86
SFXN1-203ENST00000502393 HMOX1P09601 288 aa26.67■■□□□ 1.86
SFXN1-203ENST00000502393 RC3H1Q5TC82 1133 aaKnown RBP26.67■■□□□ 1.86
SFXN1-203ENST00000502393 PELP1Q8IZL8 1130 aaKnown RBP26.67■■□□□ 1.86
SFXN1-203ENST00000502393 RTCBQ9Y3I0 505 aaKnown RBP26.66■■□□□ 1.86
SFXN1-203ENST00000502393 CHD4Q14839 1912 aa26.65■■□□□ 1.86
SFXN1-203ENST00000502393 TRAPPC3LQ5T215 181 aa26.64■■□□□ 1.86
SFXN1-203ENST00000502393 CNTNAP4Q9C0A0 1308 aa26.64■■□□□ 1.85
SFXN1-203ENST00000502393 PTCD1O75127 700 aaKnown RBP26.63■■□□□ 1.85
SFXN1-203ENST00000502393 SCN11AQ9UI33 1791 aa26.63■■□□□ 1.85
SFXN1-203ENST00000502393 ADRA2BP18089 450 aa26.62■■□□□ 1.85
SFXN1-203ENST00000502393 CNGB1Q14028 1251 aaPredicted RBP26.62■■□□□ 1.85
SFXN1-203ENST00000502393 ZNF784Q8NCA9 323 aaPredicted RBP26.62■■□□□ 1.85
SFXN1-203ENST00000502393 COL5A3P25940 1745 aaPredicted RBP26.62■■□□□ 1.85
SFXN1-203ENST00000502393 GRIN3BO60391 1043 aa26.61■■□□□ 1.85
SFXN1-203ENST00000502393 SLC52A2Q9HAB3 445 aa26.61■■□□□ 1.85
SFXN1-203ENST00000502393 RPS6KA4O75676 772 aa26.6■■□□□ 1.85
SFXN1-203ENST00000502393 MTHFSDQ2M296 383 aaKnown RBP26.6■■□□□ 1.85
SFXN1-203ENST00000502393 LGR6Q9HBX8 967 aa26.6■■□□□ 1.85
SFXN1-203ENST00000502393 COL3A1P02461 1466 aaPredicted RBP26.6■■□□□ 1.85
SFXN1-203ENST00000502393 RNMTO43148 476 aaKnown RBP26.59■■□□□ 1.85
SFXN1-203ENST00000502393 YBX3P16989 372 aaKnown RBP eCLIP26.59■■□□□ 1.858e-9■□□□□ 10.8
SFXN1-203ENST00000502393 ARHGEF1Q92888 912 aaKnown RBP26.59■■□□□ 1.85
SFXN1-203ENST00000502393 NLGN1Q8N2Q7 840 aa26.57■■□□□ 1.84
SFXN1-203ENST00000502393 MRC1P22897 1456 aa26.56■■□□□ 1.84
SFXN1-203ENST00000502393 U2SURPO15042 1029 aaKnown RBP26.56■■□□□ 1.84
SFXN1-203ENST00000502393 RFC4P35249 363 aa26.56■■□□□ 1.84
SFXN1-203ENST00000502393 MMP10P09238 476 aa26.55■■□□□ 1.84
SFXN1-203ENST00000502393 CRKLP46109 303 aaKnown RBP26.55■■□□□ 1.84
SFXN1-203ENST00000502393 CICQ96RK0 1608 aaPredicted RBP26.54■■□□□ 1.84
SFXN1-203ENST00000502393 CFAP53Q96M91 514 aa26.53■■□□□ 1.84
SFXN1-203ENST00000502393 ADAMTS7Q9UKP4 1686 aa26.53■■□□□ 1.84
SFXN1-203ENST00000502393 GYS1P13807 737 aa26.52■■□□□ 1.84
SFXN1-203ENST00000502393 MYH14Q7Z406 1995 aaKnown RBP26.52■■□□□ 1.84
SFXN1-203ENST00000502393 TJP1Q07157 1748 aa26.51■■□□□ 1.83
SFXN1-203ENST00000502393 GAS2L2Q8NHY3 880 aa26.5■■□□□ 1.83
SFXN1-203ENST00000502393 SLC39A6Q13433 755 aa26.49■■□□□ 1.83
SFXN1-203ENST00000502393 INTS5Q6P9B9 1019 aaKnown RBP26.49■■□□□ 1.83
SFXN1-203ENST00000502393 DNAJC10Q8IXB1 793 aa26.48■■□□□ 1.83
SFXN1-203ENST00000502393 VIRMAQ69YN4 1812 aaKnown RBP26.48■■□□□ 1.83
SFXN1-203ENST00000502393 GNAT3A8MTJ3 354 aa26.47■■□□□ 1.83
SFXN1-203ENST00000502393 C4AP0C0L4 1744 aa26.46■■□□□ 1.83
SFXN1-203ENST00000502393 PPP2R1AP30153 589 aa26.46■■□□□ 1.83
SFXN1-203ENST00000502393 VSIG10Q8N0Z9 540 aa26.46■■□□□ 1.83
SFXN1-203ENST00000502393 CCDC87Q9NVE4 849 aa26.46■■□□□ 1.83
SFXN1-203ENST00000502393 NUDCQ9Y266 331 aa26.46■■□□□ 1.83
SFXN1-203ENST00000502393 PARP3Q9Y6F1 533 aa26.46■■□□□ 1.83
SFXN1-203ENST00000502393 KCPQ6ZWJ8 1503 aa26.45■■□□□ 1.83
SFXN1-203ENST00000502393 USP42Q9H9J4 1324 aaKnown RBP26.45■■□□□ 1.83
SFXN1-203ENST00000502393 CYP19A1P11511 503 aaPredicted RBP26.45■■□□□ 1.82
SFXN1-203ENST00000502393 TGFB2P61812 414 aa26.45■■□□□ 1.82
SFXN1-203ENST00000502393 IL17REQ8NFR9 667 aa26.44■■□□□ 1.82
SFXN1-203ENST00000502393 TEFQ10587 303 aa26.43■■□□□ 1.82
SFXN1-203ENST00000502393 RSPH6AQ9H0K4 717 aa26.43■■□□□ 1.82
SFXN1-203ENST00000502393 SRP68Q9UHB9 627 aaKnown RBP26.43■■□□□ 1.82
SFXN1-203ENST00000502393 KIF13BQ9NQT8 1826 aa26.43■■□□□ 1.82
SFXN1-203ENST00000502393 C10orf71Q711Q0 1435 aa26.42■■□□□ 1.82
SFXN1-203ENST00000502393 PRKAR2BP31323 418 aa26.42■■□□□ 1.82
SFXN1-203ENST00000502393 TTC5Q8N0Z6 440 aa26.42■■□□□ 1.82
SFXN1-203ENST00000502393 SOS1Q07889 1333 aaPredicted RBP26.41■■□□□ 1.82
SFXN1-203ENST00000502393 PHACTR3Q96KR7 559 aa26.41■■□□□ 1.82
SFXN1-203ENST00000502393 FKBP8Q14318 412 aa26.4■■□□□ 1.82
SFXN1-203ENST00000502393 WWC3Q9ULE0 1092 aa26.4■■□□□ 1.82
SFXN1-203ENST00000502393 PXDNLA1KZ92 1463 aa26.4■■□□□ 1.82
SFXN1-203ENST00000502393 UBR2Q8IWV8 1755 aa26.39■■□□□ 1.82
SFXN1-203ENST00000502393 ZPR1O75312 459 aa26.39■■□□□ 1.82
SFXN1-203ENST00000502393 U2AF1L5P0DN76 240 aaPredicted RBP26.39■■□□□ 1.82
SFXN1-203ENST00000502393 U2AF1Q01081 240 aaKnown RBP eCLIP26.39■■□□□ 1.82
SFXN1-203ENST00000502393 CEMIPQ8WUJ3 1361 aa26.38■■□□□ 1.81
SFXN1-203ENST00000502393 ZNF790Q6PG37 636 aa26.38■■□□□ 1.81
SFXN1-203ENST00000502393 FCHSD2O94868 740 aa26.37■■□□□ 1.81
SFXN1-203ENST00000502393 STARD3NLO95772 234 aa26.37■■□□□ 1.81
SFXN1-203ENST00000502393 ZBTB1Q9Y2K1 713 aa26.37■■□□□ 1.81
SFXN1-203ENST00000502393 A0A0G2JLW4 131 aa26.36■■□□□ 1.81
SFXN1-203ENST00000502393 USPL1Q5W0Q7 1092 aa26.36■■□□□ 1.81
SFXN1-203ENST00000502393 KIAA1551Q9HCM1 1747 aa26.36■■□□□ 1.81
SFXN1-203ENST00000502393 COL15A1P39059 1388 aa26.35■■□□□ 1.81
SFXN1-203ENST00000502393 TM4SF1P30408 202 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms