RNA–Protein interactions for RNA: ENST00000499786.4

MED28-202, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-202ENST00000499786 FAM217BQ9NTX9 383 aaPredicted RBP9.33□□□□□ -0.92
MED28-202ENST00000499786 TBX22Q9Y458 520 aa9.33□□□□□ -0.92
MED28-202ENST00000499786 PLEKHH1Q9ULM0 1364 aa9.33□□□□□ -0.92
MED28-202ENST00000499786 XRN1Q8IZH2 1706 aaKnown RBP9.33□□□□□ -0.92
MED28-202ENST00000499786 ANKRD26Q9UPS8 1709 aa9.33□□□□□ -0.92
MED28-202ENST00000499786 NEFLP07196 543 aa9.32□□□□□ -0.92
MED28-202ENST00000499786 SAMD7Q7Z3H4 446 aa9.32□□□□□ -0.92
MED28-202ENST00000499786 MORC1Q86VD1 984 aa9.32□□□□□ -0.92
MED28-202ENST00000499786 SLC12A5Q9H2X9 1139 aa9.32□□□□□ -0.92
MED28-202ENST00000499786 A0A1W2PP64 1363 aa9.32□□□□□ -0.92
MED28-202ENST00000499786 INSRP06213 1382 aa9.32□□□□□ -0.92
MED28-202ENST00000499786 WASLO00401 505 aaPredicted RBP9.31□□□□□ -0.92
MED28-202ENST00000499786 MS4A1P11836 297 aa9.31□□□□□ -0.92
MED28-202ENST00000499786 PPP2R1AP30153 589 aa9.31□□□□□ -0.92
MED28-202ENST00000499786 TTLL12Q14166 644 aaPredicted RBP9.31□□□□□ -0.92
MED28-202ENST00000499786 NEUROD2Q15784 382 aa9.31□□□□□ -0.92
MED28-202ENST00000499786 WAPLQ7Z5K2 1190 aa9.31□□□□□ -0.92
MED28-202ENST00000499786 SPNS2Q8IVW8 549 aa9.31□□□□□ -0.92
MED28-202ENST00000499786 SLC26A8Q96RN1 970 aa9.31□□□□□ -0.92
MED28-202ENST00000499786 GTF3C3Q9Y5Q9 886 aa9.31□□□□□ -0.92
MED28-202ENST00000499786 ROBO2Q9HCK4 1378 aa9.31□□□□□ -0.92
MED28-202ENST00000499786 CDC42BPGQ6DT37 1551 aa9.31□□□□□ -0.92
MED28-202ENST00000499786 PPIP5K1Q6PFW1 1433 aa9.31□□□□□ -0.92
MED28-202ENST00000499786 SSTR3P32745 418 aaPredicted RBP9.3□□□□□ -0.92
MED28-202ENST00000499786 PNISRQ8TF01 805 aaKnown RBP9.3□□□□□ -0.92
MED28-202ENST00000499786 CFAP53Q96M91 514 aa9.3□□□□□ -0.92
MED28-202ENST00000499786 NPHP4O75161 1426 aaPredicted RBP9.3□□□□□ -0.92
MED28-202ENST00000499786 TOPAZ1Q8N9V7 1692 aa9.29□□□□□ -0.92
MED28-202ENST00000499786 SOWAHBA6NEL2 793 aa9.29□□□□□ -0.92
MED28-202ENST00000499786 SLC10A3P09131 477 aa9.29□□□□□ -0.92
MED28-202ENST00000499786 AMOTL2Q9Y2J4 779 aa9.29□□□□□ -0.92
MED28-202ENST00000499786 BLMP54132 1417 aaPredicted RBP9.29□□□□□ -0.92
MED28-202ENST00000499786 EDC4Q6P2E9 1401 aaKnown RBP9.29□□□□□ -0.92
MED28-202ENST00000499786 PTPRUQ92729 1446 aa9.29□□□□□ -0.92
MED28-202ENST00000499786 CD46P15529 392 aa9.28□□□□□ -0.92
MED28-202ENST00000499786 CARD14Q9BXL6 1004 aa9.28□□□□□ -0.92
MED28-202ENST00000499786 MON2Q7Z3U7 1717 aa9.28□□□□□ -0.92
MED28-202ENST00000499786 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.28□□□□□ -0.92
MED28-202ENST00000499786 AKAP12Q02952 1782 aa9.27□□□□□ -0.92
MED28-202ENST00000499786 ANKK1Q8NFD2 765 aa9.27□□□□□ -0.93
MED28-202ENST00000499786 WNT2BQ93097 391 aa9.27□□□□□ -0.93
MED28-202ENST00000499786 CABP1Q9NZU7 370 aa9.27□□□□□ -0.93
MED28-202ENST00000499786 CD163L1Q9NR16 1453 aa9.27□□□□□ -0.93
MED28-202ENST00000499786 POLR3AO14802 1390 aaPredicted RBP9.26□□□□□ -0.93
MED28-202ENST00000499786 SULF1Q8IWU6 871 aa9.26□□□□□ -0.93
MED28-202ENST00000499786 SLF2Q8IX21 1173 aa9.26□□□□□ -0.93
MED28-202ENST00000499786 NUDT16Q96DE0 195 aaKnown RBP9.26□□□□□ -0.93
MED28-202ENST00000499786 LRCH3Q96II8 777 aa9.26□□□□□ -0.93
MED28-202ENST00000499786 FAM117AQ9C073 453 aa9.26□□□□□ -0.93
MED28-202ENST00000499786 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.26□□□□□ -0.93
MED28-202ENST00000499786 CHD2O14647 1828 aaKnown RBP9.26□□□□□ -0.93
MED28-202ENST00000499786 NWD1Q149M9 1564 aa9.25□□□□□ -0.93
MED28-202ENST00000499786 ANKARQ7Z5J8 1434 aa9.25□□□□□ -0.93
MED28-202ENST00000499786 PLEKHG3A1L390 1219 aa9.25□□□□□ -0.93
MED28-202ENST00000499786 GOLGA8CPA6NN73 597 aa9.25□□□□□ -0.93
MED28-202ENST00000499786 TNNT2P45379 298 aaPredicted RBP9.25□□□□□ -0.93
MED28-202ENST00000499786 BCAMP50895 628 aa9.25□□□□□ -0.93
MED28-202ENST00000499786 THSD4Q6ZMP0 1018 aa9.25□□□□□ -0.93
MED28-202ENST00000499786 DDX11L8A8MPP1 907 aa9.24□□□□□ -0.93
MED28-202ENST00000499786 FMN2Q9NZ56 1722 aa9.24□□□□□ -0.93
MED28-202ENST00000499786 NRKQ7Z2Y5 1582 aa9.24□□□□□ -0.93
MED28-202ENST00000499786 CPSF1Q10570 1443 aaKnown RBP9.23□□□□□ -0.93
MED28-202ENST00000499786 NKTRP30414 1462 aaKnown RBP9.23□□□□□ -0.93
MED28-202ENST00000499786 NALCNQ8IZF0 1738 aa9.23□□□□□ -0.93
MED28-202ENST00000499786 GCGRP47871 477 aa9.23□□□□□ -0.93
MED28-202ENST00000499786 GGNBP2Q9H3C7 697 aa9.23□□□□□ -0.93
MED28-202ENST00000499786 SMG6Q86US8 1419 aaKnown RBP9.22□□□□□ -0.93
MED28-202ENST00000499786 ADGRL3Q9HAR2 1447 aa9.22□□□□□ -0.93
MED28-202ENST00000499786 KCNA6P17658 529 aa9.22□□□□□ -0.93
MED28-202ENST00000499786 PDE3BQ13370 1112 aa9.22□□□□□ -0.93
MED28-202ENST00000499786 C14orf37Q86TY3 774 aa9.22□□□□□ -0.93
MED28-202ENST00000499786 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.22□□□□□ -0.93
MED28-202ENST00000499786 KCTD12Q96CX2 325 aaKnown RBP9.22□□□□□ -0.93
MED28-202ENST00000499786 COG3Q96JB2 828 aa9.22□□□□□ -0.93
MED28-202ENST00000499786 BEGAINQ9BUH8 593 aa9.22□□□□□ -0.93
MED28-202ENST00000499786 TSR3Q9UJK0 312 aaKnown RBP9.22□□□□□ -0.93
MED28-202ENST00000499786 NUDCQ9Y266 331 aa9.22□□□□□ -0.93
MED28-202ENST00000499786 SHPRHQ149N8 1683 aa9.22□□□□□ -0.93
MED28-202ENST00000499786 NGEFQ8N5V2 710 aa9.21□□□□□ -0.94
MED28-202ENST00000499786 FYB1O15117 783 aa9.2□□□□□ -0.94
MED28-202ENST00000499786 MTHFSP49914 203 aa9.2□□□□□ -0.94
MED28-202ENST00000499786 DDRGK1Q96HY6 314 aa9.2□□□□□ -0.94
MED28-202ENST00000499786 ADAMTS8Q9UP79 889 aa9.2□□□□□ -0.94
MED28-202ENST00000499786 HPS5Q9UPZ3 1129 aa9.2□□□□□ -0.94
MED28-202ENST00000499786 PRR36Q9H6K5 1346 aa9.2□□□□□ -0.94
MED28-202ENST00000499786 USP6P35125 1406 aa9.2□□□□□ -0.94
MED28-202ENST00000499786 RDH13Q8NBN7 331 aa9.19□□□□□ -0.94
MED28-202ENST00000499786 NGDNQ8NEJ9 315 aaKnown RBP9.19□□□□□ -0.94
MED28-202ENST00000499786 WBP1LQ9NX94 342 aa9.19□□□□□ -0.94
MED28-202ENST00000499786 ACEP12821 1306 aa9.19□□□□□ -0.94
MED28-202ENST00000499786 TTC21AQ8NDW8 1320 aa9.19□□□□□ -0.94
MED28-202ENST00000499786 CDK12Q9NYV4 1490 aaPredicted RBP9.19□□□□□ -0.94
MED28-202ENST00000499786 NEFMP07197 916 aa9.18□□□□□ -0.94
MED28-202ENST00000499786 SLC4A3P48751 1232 aa9.18□□□□□ -0.94
MED28-202ENST00000499786 PPP4CP60510 307 aa9.18□□□□□ -0.94
MED28-202ENST00000499786 MMRN1Q13201 1228 aa9.18□□□□□ -0.94
MED28-202ENST00000499786 IL27Q8NEV9 243 aa9.18□□□□□ -0.94
MED28-202ENST00000499786 SPIRE2Q8WWL2 714 aa9.18□□□□□ -0.94
MED28-202ENST00000499786 NECTIN2Q92692 538 aa9.18□□□□□ -0.94
MED28-202ENST00000499786 PNNQ9H307 717 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms