RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 SMIM5Q71RC9 77 aa8.17□□□□□ -1.1
FXN-205ENST00000498653 CDCA7Q9BWT1 371 aaPredicted RBP8.17□□□□□ -1.1
FXN-205ENST00000498653 TSPYL2Q9H2G4 693 aaPredicted RBP8.17□□□□□ -1.1
FXN-205ENST00000498653 COLQQ9Y215 455 aaPredicted RBP8.17□□□□□ -1.1
FXN-205ENST00000498653 ERBB3P21860 1342 aa8.17□□□□□ -1.1
FXN-205ENST00000498653 ADAMTSL1Q8N6G6 1762 aa8.17□□□□□ -1.1
FXN-205ENST00000498653 A0A0G2JLW4 131 aa8.16□□□□□ -1.1
FXN-205ENST00000498653 CD44P16070 742 aaKnown RBP8.16□□□□□ -1.1
FXN-205ENST00000498653 COL9A1P20849 921 aa8.16□□□□□ -1.1
FXN-205ENST00000498653 CCDC88AQ3V6T2 1871 aa8.16□□□□□ -1.1
FXN-205ENST00000498653 SP7Q8TDD2 431 aaPredicted RBP8.16□□□□□ -1.1
FXN-205ENST00000498653 DOT1LQ8TEK3 1739 aa8.16□□□□□ -1.1
FXN-205ENST00000498653 BEGAINQ9BUH8 593 aa8.16□□□□□ -1.1
FXN-205ENST00000498653 ANKRD50Q9ULJ7 1429 aa8.16□□□□□ -1.1
FXN-205ENST00000498653 DCAF5Q96JK2 942 aa8.15□□□□□ -1.1
FXN-205ENST00000498653 STK26Q9P289 416 aa8.15□□□□□ -1.1
FXN-205ENST00000498653 RAPGEFL1Q9UHV5 662 aa8.15□□□□□ -1.1
FXN-205ENST00000498653 RGPD5Q99666 1765 aa8.15□□□□□ -1.11
FXN-205ENST00000498653 CEP290O15078 2479 aa8.14□□□□□ -1.11
FXN-205ENST00000498653 NSD2O96028 1365 aa8.14□□□□□ -1.11
FXN-205ENST00000498653 TGFB2P61812 414 aa8.14□□□□□ -1.11
FXN-205ENST00000498653 NUTM2GQ5VZR2 741 aa8.14□□□□□ -1.11
FXN-205ENST00000498653 AMIGO3Q86WK7 504 aa8.14□□□□□ -1.11
FXN-205ENST00000498653 WDR17Q8IZU2 1322 aa8.13□□□□□ -1.11
FXN-205ENST00000498653 HAX1O00165 279 aa8.13□□□□□ -1.11
FXN-205ENST00000498653 ITGBL1O95965 494 aaPredicted RBP8.13□□□□□ -1.11
FXN-205ENST00000498653 TOM1L2Q6ZVM7 507 aa8.13□□□□□ -1.11
FXN-205ENST00000498653 PPIP5K1Q6PFW1 1433 aa8.12□□□□□ -1.11
FXN-205ENST00000498653 C4BP0C0L5 1744 aa8.12□□□□□ -1.11
FXN-205ENST00000498653 C19orf67A6NJJ6 358 aa8.12□□□□□ -1.11
FXN-205ENST00000498653 EXOC5O00471 708 aa8.12□□□□□ -1.11
FXN-205ENST00000498653 DPEP1P16444 411 aa8.12□□□□□ -1.11
FXN-205ENST00000498653 KCNA3P22001 575 aa8.12□□□□□ -1.11
FXN-205ENST00000498653 RASSF7Q02833 373 aa8.12□□□□□ -1.11
FXN-205ENST00000498653 CAPNS2Q96L46 248 aa8.12□□□□□ -1.11
FXN-205ENST00000498653 HTTP42858 3142 aa8.12□□□□□ -1.11
FXN-205ENST00000498653 VGFO15240 615 aaPredicted RBP8.11□□□□□ -1.11
FXN-205ENST00000498653 CA12O43570 354 aa8.11□□□□□ -1.11
FXN-205ENST00000498653 CHIC2Q9UKJ5 165 aa8.11□□□□□ -1.11
FXN-205ENST00000498653 TAOK2Q9UL54 1235 aa8.11□□□□□ -1.11
FXN-205ENST00000498653 YTHDC2Q9H6S0 1430 aaKnown RBP8.11□□□□□ -1.11
FXN-205ENST00000498653 CHRM1P11229 460 aaPredicted RBP8.1□□□□□ -1.11
FXN-205ENST00000498653 GPR101Q96P66 508 aaPredicted RBP8.1□□□□□ -1.11
FXN-205ENST00000498653 CCNL1Q9UK58 526 aaPredicted RBP8.1□□□□□ -1.11
FXN-205ENST00000498653 DICER1Q9UPY3 1922 aaKnown RBP8.09□□□□□ -1.11
FXN-205ENST00000498653 C4AP0C0L4 1744 aa8.09□□□□□ -1.11
FXN-205ENST00000498653 LAMA2P24043 3122 aaKnown RBP8.09□□□□□ -1.11
FXN-205ENST00000498653 CYP4F22Q6NT55 531 aa8.09□□□□□ -1.11
FXN-205ENST00000498653 VPS8Q8N3P4 1428 aa8.09□□□□□ -1.11
FXN-205ENST00000498653 CENPFP49454 3210 aa8.08□□□□□ -1.12
FXN-205ENST00000498653 AOC2O75106 756 aa8.08□□□□□ -1.12
FXN-205ENST00000498653 PYGBP11216 843 aa8.08□□□□□ -1.12
FXN-205ENST00000498653 LDHDQ86WU2 507 aa8.08□□□□□ -1.12
FXN-205ENST00000498653 FLAD1Q8NFF5 587 aa8.08□□□□□ -1.12
FXN-205ENST00000498653 FAM122AQ96E09 287 aa8.08□□□□□ -1.12
FXN-205ENST00000498653 CARD10Q9BWT7 1032 aa8.08□□□□□ -1.12
FXN-205ENST00000498653 ABT1Q9ULW3 272 aaKnown RBP8.08□□□□□ -1.12
FXN-205ENST00000498653 HPS5Q9UPZ3 1129 aa8.08□□□□□ -1.12
FXN-205ENST00000498653 CCDC61Q9Y6R9 512 aa8.08□□□□□ -1.12
FXN-205ENST00000498653 SCN4AP35499 1836 aa8.08□□□□□ -1.12
FXN-205ENST00000498653 EYSQ5T1H1 3165 aa8.08□□□□□ -1.12
FXN-205ENST00000498653 SCN11AQ9UI33 1791 aa8.07□□□□□ -1.12
FXN-205ENST00000498653 TTC28Q96AY4 2481 aa8.07□□□□□ -1.12
FXN-205ENST00000498653 RBBP6Q7Z6E9 1792 aaKnown RBP8.07□□□□□ -1.12
FXN-205ENST00000498653 ERBB4Q15303 1308 aa8.06□□□□□ -1.12
FXN-205ENST00000498653 GCP02774 474 aa8.06□□□□□ -1.12
FXN-205ENST00000498653 LMNB1P20700 586 aa8.06□□□□□ -1.12
FXN-205ENST00000498653 ECE1P42892 770 aa8.06□□□□□ -1.12
FXN-205ENST00000498653 TMEM132EQ6IEE7 984 aa8.06□□□□□ -1.12
FXN-205ENST00000498653 OTUD5Q96G74 571 aa8.06□□□□□ -1.12
FXN-205ENST00000498653 AXIN2Q9Y2T1 843 aa8.06□□□□□ -1.12
FXN-205ENST00000498653 TRPM7Q96QT4 1865 aa8.05□□□□□ -1.12
FXN-205ENST00000498653 MMP10P09238 476 aa8.05□□□□□ -1.12
FXN-205ENST00000498653 MAP2K2P36507 400 aa8.05□□□□□ -1.12
FXN-205ENST00000498653 CLCN6P51797 869 aa8.05□□□□□ -1.12
FXN-205ENST00000498653 GRM1Q13255 1194 aa8.05□□□□□ -1.12
FXN-205ENST00000498653 ZNF467Q7Z7K2 595 aaPredicted RBP8.05□□□□□ -1.12
FXN-205ENST00000498653 ZNF579Q8NAF0 562 aaKnown RBP8.05□□□□□ -1.12
FXN-205ENST00000498653 NGDNQ8NEJ9 315 aaKnown RBP8.05□□□□□ -1.12
FXN-205ENST00000498653 SIRT1Q96EB6 747 aa8.05□□□□□ -1.12
FXN-205ENST00000498653 CCDC7Q96M83 1385 aa8.05□□□□□ -1.12
FXN-205ENST00000498653 PRUNE2Q8WUY3 3088 aa8.05□□□□□ -1.12
FXN-205ENST00000498653 MINK1Q8N4C8 1332 aaPredicted RBP8.04□□□□□ -1.12
FXN-205ENST00000498653 BRPF1P55201 1214 aaPredicted RBP8.04□□□□□ -1.12
FXN-205ENST00000498653 ANKRD36BQ8N2N9 1353 aa8.04□□□□□ -1.12
FXN-205ENST00000498653 PAPPA2Q9BXP8 1791 aa8.04□□□□□ -1.12
FXN-205ENST00000498653 CPSF1Q10570 1443 aaKnown RBP8.03□□□□□ -1.12
FXN-205ENST00000498653 DLEC1Q9Y238 1755 aa8.03□□□□□ -1.12
FXN-205ENST00000498653 RIOK3O14730 519 aaKnown RBP8.03□□□□□ -1.12
FXN-205ENST00000498653 RGL2O15211 777 aa8.03□□□□□ -1.12
FXN-205ENST00000498653 DALRD3Q5D0E6 543 aaKnown RBP8.03□□□□□ -1.12
FXN-205ENST00000498653 PAXIP1Q6ZW49 1069 aaPredicted RBP8.03□□□□□ -1.12
FXN-205ENST00000498653 PIM2Q9P1W9 311 aa8.03□□□□□ -1.12
FXN-205ENST00000498653 PIEZO1Q92508 2521 aa8.03□□□□□ -1.12
FXN-205ENST00000498653 NSD3Q9BZ95 1437 aa8.03□□□□□ -1.12
FXN-205ENST00000498653 ADGRF5Q8IZF2 1346 aa8.03□□□□□ -1.12
FXN-205ENST00000498653 EIF3AQ14152 1382 aaKnown RBP8.02□□□□□ -1.13
FXN-205ENST00000498653 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.02□□□□□ -1.13
FXN-205ENST00000498653 PHF14O94880 888 aa8.02□□□□□ -1.13
FXN-205ENST00000498653 SAFB2Q14151 953 aaKnown RBP eCLIP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms