RNA–Protein interactions for RNA: ENST00000498579.5

ECM1-207, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 943 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-207ENST00000498579 C4BP0C0L5 1744 aa25.35■■□□□ 1.65
ECM1-207ENST00000498579 YY1P25490 414 aa25.35■■□□□ 1.65
ECM1-207ENST00000498579 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.34■■□□□ 1.65
ECM1-207ENST00000498579 HMOX1P09601 288 aa25.34■■□□□ 1.65
ECM1-207ENST00000498579 KLHL34Q8N239 644 aa25.34■■□□□ 1.65
ECM1-207ENST00000498579 PHF14O94880 888 aa25.33■■□□□ 1.65
ECM1-207ENST00000498579 ITPK1Q13572 414 aa25.33■■□□□ 1.65
ECM1-207ENST00000498579 CNGB1Q14028 1251 aaPredicted RBP25.33■■□□□ 1.65
ECM1-207ENST00000498579 RBM42Q9BTD8 480 aaKnown RBP25.33■■□□□ 1.65
ECM1-207ENST00000498579 TUBGCP6Q96RT7 1819 aa25.33■■□□□ 1.64
ECM1-207ENST00000498579 GNPATO15228 680 aa25.32■■□□□ 1.64
ECM1-207ENST00000498579 CFAP53Q96M91 514 aa25.32■■□□□ 1.64
ECM1-207ENST00000498579 MSL1Q68DK7 614 aa25.31■■□□□ 1.64
ECM1-207ENST00000498579 COL24A1Q17RW2 1714 aa25.3■■□□□ 1.64
ECM1-207ENST00000498579 NFATC2IPQ8NCF5 419 aa25.3■■□□□ 1.64
ECM1-207ENST00000498579 RC3H1Q5TC82 1133 aaKnown RBP25.29■■□□□ 1.64
ECM1-207ENST00000498579 TAF1LQ8IZX4 1826 aa25.28■■□□□ 1.64
ECM1-207ENST00000498579 U2SURPO15042 1029 aaKnown RBP25.28■■□□□ 1.64
ECM1-207ENST00000498579 RTCBQ9Y3I0 505 aaKnown RBP25.28■■□□□ 1.64
ECM1-207ENST00000498579 ADRA2BP18089 450 aa25.27■■□□□ 1.64
ECM1-207ENST00000498579 AMIGO3Q86WK7 504 aa25.27■■□□□ 1.64
ECM1-207ENST00000498579 SLC52A2Q9HAB3 445 aa25.27■■□□□ 1.64
ECM1-207ENST00000498579 CNTNAP4Q9C0A0 1308 aa25.27■■□□□ 1.64
ECM1-207ENST00000498579 COL3A1P02461 1466 aaPredicted RBP25.27■■□□□ 1.64
ECM1-207ENST00000498579 GPR162Q16538 588 aa25.26■■□□□ 1.63
ECM1-207ENST00000498579 MTHFSDQ2M296 383 aaKnown RBP25.26■■□□□ 1.63
ECM1-207ENST00000498579 NUDCQ9Y266 331 aa25.26■■□□□ 1.63
ECM1-207ENST00000498579 RNMTO43148 476 aaKnown RBP25.25■■□□□ 1.63
ECM1-207ENST00000498579 TRAPPC3LQ5T215 181 aa25.25■■□□□ 1.63
ECM1-207ENST00000498579 GAS2L2Q8NHY3 880 aa25.25■■□□□ 1.63
ECM1-207ENST00000498579 SLC4A9Q96Q91 983 aa25.25■■□□□ 1.63
ECM1-207ENST00000498579 CD2APQ9Y5K6 639 aa25.25■■□□□ 1.63
ECM1-207ENST00000498579 ZNF831Q5JPB2 1677 aa25.24■■□□□ 1.63
ECM1-207ENST00000498579 PTCD1O75127 700 aaKnown RBP25.24■■□□□ 1.63
ECM1-207ENST00000498579 RPS6KA4O75676 772 aa25.21■■□□□ 1.63
ECM1-207ENST00000498579 NLGN2Q8NFZ4 835 aa25.21■■□□□ 1.63
ECM1-207ENST00000498579 LGR6Q9HBX8 967 aa25.21■■□□□ 1.63
ECM1-207ENST00000498579 MRC1P22897 1456 aa25.21■■□□□ 1.63
ECM1-207ENST00000498579 UBR3Q6ZT12 1888 aa25.2■■□□□ 1.62
ECM1-207ENST00000498579 PPP2R1AP30153 589 aa25.2■■□□□ 1.62
ECM1-207ENST00000498579 SMIM5Q71RC9 77 aa25.19■■□□□ 1.62
ECM1-207ENST00000498579 UTRNP46939 3433 aa25.18■■□□□ 1.62
ECM1-207ENST00000498579 RFC4P35249 363 aa25.18■■□□□ 1.62
ECM1-207ENST00000498579 PELP1Q8IZL8 1130 aaKnown RBP25.18■■□□□ 1.62
ECM1-207ENST00000498579 NLGN1Q8N2Q7 840 aa25.18■■□□□ 1.62
ECM1-207ENST00000498579 GNAT3A8MTJ3 354 aa25.17■■□□□ 1.62
ECM1-207ENST00000498579 GRIN3BO60391 1043 aa25.17■■□□□ 1.62
ECM1-207ENST00000498579 CRKLP46109 303 aaKnown RBP25.17■■□□□ 1.62
ECM1-207ENST00000498579 ARHGEF1Q92888 912 aaKnown RBP25.16■■□□□ 1.62
ECM1-207ENST00000498579 SCN11AQ9UI33 1791 aa25.14■■□□□ 1.62
ECM1-207ENST00000498579 PRKAR2BP31323 418 aa25.14■■□□□ 1.62
ECM1-207ENST00000498579 TEFQ10587 303 aa25.14■■□□□ 1.62
ECM1-207ENST00000498579 TTC5Q8N0Z6 440 aa25.14■■□□□ 1.62
ECM1-207ENST00000498579 VSIG10Q8N0Z9 540 aa25.14■■□□□ 1.62
ECM1-207ENST00000498579 RSPH6AQ9H0K4 717 aa25.14■■□□□ 1.62
ECM1-207ENST00000498579 MMP10P09238 476 aa25.13■■□□□ 1.61
ECM1-207ENST00000498579 U2AF1L5P0DN76 240 aaPredicted RBP25.13■■□□□ 1.61
ECM1-207ENST00000498579 U2AF1Q01081 240 aaKnown RBP eCLIP25.13■■□□□ 1.61
ECM1-207ENST00000498579 FCHSD2O94868 740 aa25.12■■□□□ 1.61
ECM1-207ENST00000498579 SLC39A6Q13433 755 aa25.12■■□□□ 1.61
ECM1-207ENST00000498579 CICQ96RK0 1608 aaPredicted RBP25.11■■□□□ 1.61
ECM1-207ENST00000498579 ADAMTS7Q9UKP4 1686 aa25.1■■□□□ 1.61
ECM1-207ENST00000498579 COL5A3P25940 1745 aaPredicted RBP25.1■■□□□ 1.61
ECM1-207ENST00000498579 GYS1P13807 737 aa25.1■■□□□ 1.61
ECM1-207ENST00000498579 DNAJC10Q8IXB1 793 aa25.1■■□□□ 1.61
ECM1-207ENST00000498579 CCDC87Q9NVE4 849 aa25.1■■□□□ 1.61
ECM1-207ENST00000498579 INTS5Q6P9B9 1019 aaKnown RBP25.08■■□□□ 1.61
ECM1-207ENST00000498579 IL17REQ8NFR9 667 aa25.08■■□□□ 1.61
ECM1-207ENST00000498579 PARP3Q9Y6F1 533 aa25.08■■□□□ 1.61
ECM1-207ENST00000498579 NEFMP07197 916 aa25.07■■□□□ 1.6
ECM1-207ENST00000498579 CYP19A1P11511 503 aaPredicted RBP25.07■■□□□ 1.6
ECM1-207ENST00000498579 YBX3P16989 372 aaKnown RBP eCLIP25.07■■□□□ 1.6
ECM1-207ENST00000498579 PHACTR3Q96KR7 559 aa25.07■■□□□ 1.6
ECM1-207ENST00000498579 USP42Q9H9J4 1324 aaKnown RBP25.07■■□□□ 1.6
ECM1-207ENST00000498579 CEMIPQ8WUJ3 1361 aa25.06■■□□□ 1.6
ECM1-207ENST00000498579 STARD3NLO95772 234 aa25.06■■□□□ 1.6
ECM1-207ENST00000498579 RTF1Q92541 710 aaKnown RBP25.06■■□□□ 1.6
ECM1-207ENST00000498579 KCPQ6ZWJ8 1503 aa25.06■■□□□ 1.6
ECM1-207ENST00000498579 ZPR1O75312 459 aa25.05■■□□□ 1.6
ECM1-207ENST00000498579 ZNF790Q6PG37 636 aa25.05■■□□□ 1.6
ECM1-207ENST00000498579 ZNF784Q8NCA9 323 aaPredicted RBP25.05■■□□□ 1.6
ECM1-207ENST00000498579 TEX13AQ9BXU3 409 aaPredicted RBP25.05■■□□□ 1.6
ECM1-207ENST00000498579 SOS1Q07889 1333 aaPredicted RBP25.05■■□□□ 1.6
ECM1-207ENST00000498579 TGFB2P61812 414 aa25.04■■□□□ 1.6
ECM1-207ENST00000498579 TJP1Q07157 1748 aa25.03■■□□□ 1.6
ECM1-207ENST00000498579 GOLGB1Q14789 3259 aaKnown RBP25.03■■□□□ 1.6
ECM1-207ENST00000498579 HTATSF1O43719 755 aaKnown RBP25.02■■□□□ 1.6
ECM1-207ENST00000498579 FMNL2Q96PY5 1086 aa25.02■■□□□ 1.6
ECM1-207ENST00000498579 BTBD11A6QL63 1104 aa25.01■■□□□ 1.59
ECM1-207ENST00000498579 RALBP1Q15311 655 aa25.01■■□□□ 1.59
ECM1-207ENST00000498579 PNNQ9H307 717 aaKnown RBP25.01■■□□□ 1.59
ECM1-207ENST00000498579 SRP68Q9UHB9 627 aaKnown RBP25.01■■□□□ 1.59
ECM1-207ENST00000498579 HEG1Q9ULI3 1381 aa25.01■■□□□ 1.59
ECM1-207ENST00000498579 ZNF496Q96IT1 587 aaPredicted RBP25■■□□□ 1.59
ECM1-207ENST00000498579 ZBTB1Q9Y2K1 713 aa25■■□□□ 1.59
ECM1-207ENST00000498579 COL15A1P39059 1388 aa25■■□□□ 1.59
ECM1-207ENST00000498579 C10orf71Q711Q0 1435 aa25■■□□□ 1.59
ECM1-207ENST00000498579 FKBP8Q14318 412 aa24.99■■□□□ 1.59
ECM1-207ENST00000498579 NARFQ9UHQ1 456 aa24.99■■□□□ 1.59
ECM1-207ENST00000498579 MYH14Q7Z406 1995 aaKnown RBP24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms