RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 KDRP35968 1356 aa11.51□□□□□ -0.57
HMGXB4-207ENST00000498212 NPC1L1Q9UHC9 1359 aa11.51□□□□□ -0.57
HMGXB4-207ENST00000498212 COL5A3P25940 1745 aaPredicted RBP11.5□□□□□ -0.57
HMGXB4-207ENST00000498212 HSP90AB1P08238 724 aaKnown RBP11.5□□□□□ -0.57
HMGXB4-207ENST00000498212 SULT6B1Q6IMI4 303 aa11.5□□□□□ -0.57
HMGXB4-207ENST00000498212 ZNF530Q6P9A1 599 aaPredicted RBP11.5□□□□□ -0.57
HMGXB4-207ENST00000498212 AEBP1Q8IUX7 1158 aa11.5□□□□□ -0.57
HMGXB4-207ENST00000498212 ARXQ96QS3 562 aa11.5□□□□□ -0.57
HMGXB4-207ENST00000498212 FHDC1Q9C0D6 1143 aaPredicted RBP11.5□□□□□ -0.57
HMGXB4-207ENST00000498212 C1orf141Q5JVX7 400 aa11.49□□□□□ -0.57
HMGXB4-207ENST00000498212 DCAF5Q96JK2 942 aa11.49□□□□□ -0.57
HMGXB4-207ENST00000498212 KDM6AO15550 1401 aaPredicted RBP11.49□□□□□ -0.57
HMGXB4-207ENST00000498212 CHD4Q14839 1912 aa11.48□□□□□ -0.57
HMGXB4-207ENST00000498212 LOC102724428A0A0B4J2F2 783 aa11.48□□□□□ -0.57
HMGXB4-207ENST00000498212 ERVV-2B6SEH9 535 aa11.48□□□□□ -0.57
HMGXB4-207ENST00000498212 POLD1P28340 1107 aa11.48□□□□□ -0.57
HMGXB4-207ENST00000498212 SIK1P57059 783 aa11.48□□□□□ -0.57
HMGXB4-207ENST00000498212 CNGB1Q14028 1251 aaPredicted RBP11.48□□□□□ -0.57
HMGXB4-207ENST00000498212 COL23A1Q86Y22 540 aaPredicted RBP11.48□□□□□ -0.57
HMGXB4-207ENST00000498212 SYT17Q9BSW7 474 aa11.48□□□□□ -0.57
HMGXB4-207ENST00000498212 ASAP1Q9ULH1 1129 aa11.48□□□□□ -0.57
HMGXB4-207ENST00000498212 MAP3K5Q99683 1374 aa11.47□□□□□ -0.57
HMGXB4-207ENST00000498212 FLAD1Q8NFF5 587 aa11.47□□□□□ -0.57
HMGXB4-207ENST00000498212 AK7Q96M32 723 aa11.47□□□□□ -0.57
HMGXB4-207ENST00000498212 ATG3Q9NT62 314 aa11.47□□□□□ -0.57
HMGXB4-207ENST00000498212 COL3A1P02461 1466 aaPredicted RBP11.46□□□□□ -0.57
HMGXB4-207ENST00000498212 DIAPH1O60610 1272 aaKnown RBP11.46□□□□□ -0.57
HMGXB4-207ENST00000498212 ATP6V1AP38606 617 aa11.46□□□□□ -0.57
HMGXB4-207ENST00000498212 ADAMTS7Q9UKP4 1686 aa11.46□□□□□ -0.58
HMGXB4-207ENST00000498212 HMOX1P09601 288 aa11.45□□□□□ -0.58
HMGXB4-207ENST00000498212 CABP4P57796 275 aa11.45□□□□□ -0.58
HMGXB4-207ENST00000498212 LINC00116Q8NCU8 138 aa11.45□□□□□ -0.58
HMGXB4-207ENST00000498212 CICQ96RK0 1608 aaPredicted RBP11.45□□□□□ -0.58
HMGXB4-207ENST00000498212 MYH14Q7Z406 1995 aaKnown RBP11.45□□□□□ -0.58
HMGXB4-207ENST00000498212 TJP1Q07157 1748 aa11.44□□□□□ -0.58
HMGXB4-207ENST00000498212 ABCB7O75027 752 aa11.44□□□□□ -0.58
HMGXB4-207ENST00000498212 PHF14O94880 888 aa11.44□□□□□ -0.58
HMGXB4-207ENST00000498212 ITPK1Q13572 414 aa11.44□□□□□ -0.58
HMGXB4-207ENST00000498212 AKAP4Q5JQC9 854 aa11.44□□□□□ -0.58
HMGXB4-207ENST00000498212 KLHL34Q8N239 644 aa11.44□□□□□ -0.58
HMGXB4-207ENST00000498212 RBM42Q9BTD8 480 aaKnown RBP11.44□□□□□ -0.58
HMGXB4-207ENST00000498212 C4AP0C0L4 1744 aa11.43□□□□□ -0.58
HMGXB4-207ENST00000498212 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.43□□□□□ -0.58
HMGXB4-207ENST00000498212 SSFA2P28290 1259 aa11.43□□□□□ -0.58
HMGXB4-207ENST00000498212 MSL1Q68DK7 614 aa11.43□□□□□ -0.58
HMGXB4-207ENST00000498212 MRC1P22897 1456 aa11.43□□□□□ -0.58
HMGXB4-207ENST00000498212 SIPA1L3O60292 1781 aaPredicted RBP11.42□□□□□ -0.58
HMGXB4-207ENST00000498212 U2SURPO15042 1029 aaKnown RBP11.42□□□□□ -0.58
HMGXB4-207ENST00000498212 GNPATO15228 680 aa11.42□□□□□ -0.58
HMGXB4-207ENST00000498212 YY1P25490 414 aa11.42□□□□□ -0.58
HMGXB4-207ENST00000498212 AMIGO3Q86WK7 504 aa11.42□□□□□ -0.58
HMGXB4-207ENST00000498212 NFATC2IPQ8NCF5 419 aa11.42□□□□□ -0.58
HMGXB4-207ENST00000498212 UBR2Q8IWV8 1755 aa11.41□□□□□ -0.58
HMGXB4-207ENST00000498212 SMIM5Q71RC9 77 aa11.41□□□□□ -0.58
HMGXB4-207ENST00000498212 CFAP53Q96M91 514 aa11.41□□□□□ -0.58
HMGXB4-207ENST00000498212 SLC4A9Q96Q91 983 aa11.41□□□□□ -0.58
HMGXB4-207ENST00000498212 RNMTO43148 476 aaKnown RBP11.4□□□□□ -0.58
HMGXB4-207ENST00000498212 PTCD1O75127 700 aaKnown RBP11.4□□□□□ -0.58
HMGXB4-207ENST00000498212 MTHFSDQ2M296 383 aaKnown RBP11.4□□□□□ -0.58
HMGXB4-207ENST00000498212 SLC52A2Q9HAB3 445 aa11.4□□□□□ -0.58
HMGXB4-207ENST00000498212 LGR6Q9HBX8 967 aa11.4□□□□□ -0.58
HMGXB4-207ENST00000498212 KIF13BQ9NQT8 1826 aa11.39□□□□□ -0.59
HMGXB4-207ENST00000498212 CNTNAP4Q9C0A0 1308 aa11.39□□□□□ -0.59
HMGXB4-207ENST00000498212 RC3H1Q5TC82 1133 aaKnown RBP11.39□□□□□ -0.59
HMGXB4-207ENST00000498212 RTCBQ9Y3I0 505 aaKnown RBP11.39□□□□□ -0.59
HMGXB4-207ENST00000498212 PPP2R1AP30153 589 aa11.38□□□□□ -0.59
HMGXB4-207ENST00000498212 GPR162Q16538 588 aa11.38□□□□□ -0.59
HMGXB4-207ENST00000498212 NLGN2Q8NFZ4 835 aa11.38□□□□□ -0.59
HMGXB4-207ENST00000498212 DLG5Q8TDM6 1919 aa11.37□□□□□ -0.59
HMGXB4-207ENST00000498212 KCPQ6ZWJ8 1503 aa11.37□□□□□ -0.59
HMGXB4-207ENST00000498212 TRAPPC3LQ5T215 181 aa11.37□□□□□ -0.59
HMGXB4-207ENST00000498212 PELP1Q8IZL8 1130 aaKnown RBP11.37□□□□□ -0.59
HMGXB4-207ENST00000498212 GAS2L2Q8NHY3 880 aa11.37□□□□□ -0.59
HMGXB4-207ENST00000498212 NUDCQ9Y266 331 aa11.37□□□□□ -0.59
HMGXB4-207ENST00000498212 N4BP2Q86UW6 1770 aaPredicted RBP11.36□□□□□ -0.59
HMGXB4-207ENST00000498212 RPS6KA4O75676 772 aa11.36□□□□□ -0.59
HMGXB4-207ENST00000498212 CRKLP46109 303 aaKnown RBP11.36□□□□□ -0.59
HMGXB4-207ENST00000498212 SLC39A6Q13433 755 aa11.36□□□□□ -0.59
HMGXB4-207ENST00000498212 ZNF219Q9P2Y4 722 aaPredicted RBP11.36□□□□□ -0.59
HMGXB4-207ENST00000498212 CD2APQ9Y5K6 639 aa11.36□□□□□ -0.59
HMGXB4-207ENST00000498212 GNAT3A8MTJ3 354 aa11.35□□□□□ -0.59
HMGXB4-207ENST00000498212 PRKAR2BP31323 418 aa11.35□□□□□ -0.59
HMGXB4-207ENST00000498212 RFC4P35249 363 aa11.35□□□□□ -0.59
HMGXB4-207ENST00000498212 ARHGEF1Q92888 912 aaKnown RBP11.35□□□□□ -0.59
HMGXB4-207ENST00000498212 RSPH6AQ9H0K4 717 aa11.35□□□□□ -0.59
HMGXB4-207ENST00000498212 KIAA1551Q9HCM1 1747 aa11.35□□□□□ -0.59
HMGXB4-207ENST00000498212 U2AF1L5P0DN76 240 aaPredicted RBP11.34□□□□□ -0.59
HMGXB4-207ENST00000498212 U2AF1Q01081 240 aaKnown RBP eCLIP11.34□□□□□ -0.59
HMGXB4-207ENST00000498212 TEFQ10587 303 aa11.34□□□□□ -0.59
HMGXB4-207ENST00000498212 BRCA1P38398 1863 aaKnown RBP11.34□□□□□ -0.59
HMGXB4-207ENST00000498212 MMP10P09238 476 aa11.33□□□□□ -0.6
HMGXB4-207ENST00000498212 GYS1P13807 737 aa11.33□□□□□ -0.6
HMGXB4-207ENST00000498212 DNAJC10Q8IXB1 793 aa11.33□□□□□ -0.6
HMGXB4-207ENST00000498212 NLGN1Q8N2Q7 840 aa11.33□□□□□ -0.6
HMGXB4-207ENST00000498212 IL17REQ8NFR9 667 aa11.33□□□□□ -0.6
HMGXB4-207ENST00000498212 PHACTR3Q96KR7 559 aa11.33□□□□□ -0.6
HMGXB4-207ENST00000498212 AFDNP55196 1824 aaKnown RBP11.32□□□□□ -0.6
HMGXB4-207ENST00000498212 FCHSD2O94868 740 aa11.32□□□□□ -0.6
HMGXB4-207ENST00000498212 YBX3P16989 372 aaKnown RBP eCLIP11.32□□□□□ -0.6
HMGXB4-207ENST00000498212 INTS5Q6P9B9 1019 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms