RNA–Protein interactions for RNA: ENST00000497980.5

STX1A-214, Transcript of syntaxin 1A, humanhuman

TSL 3

Gene STX1A, Length 503 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX1A-214ENST00000497980 ATP6V1AP38606 617 aa32.7■■■□□ 2.83
STX1A-214ENST00000497980 MSH5O43196 834 aa32.68■■■□□ 2.82
STX1A-214ENST00000497980 GAS2L2Q8NHY3 880 aa32.68■■■□□ 2.82
STX1A-214ENST00000497980 ARXQ96QS3 562 aa32.68■■■□□ 2.82
STX1A-214ENST00000497980 ZNF831Q5JPB2 1677 aa32.67■■■□□ 2.82
STX1A-214ENST00000497980 MRC1P22897 1456 aa32.67■■■□□ 2.82
STX1A-214ENST00000497980 DCAF8L1A6NGE4 600 aa32.66■■■□□ 2.82
STX1A-214ENST00000497980 SSFA2P28290 1259 aa32.66■■■□□ 2.82
STX1A-214ENST00000497980 MTHFSDQ2M296 383 aaKnown RBP32.66■■■□□ 2.82
STX1A-214ENST00000497980 COL23A1Q86Y22 540 aaPredicted RBP32.66■■■□□ 2.82
STX1A-214ENST00000497980 MAP3K5Q99683 1374 aa32.66■■■□□ 2.82
STX1A-214ENST00000497980 NFATC2IPQ8NCF5 419 aa32.65■■■□□ 2.82
STX1A-214ENST00000497980 LINC00116Q8NCU8 138 aa32.65■■■□□ 2.82
STX1A-214ENST00000497980 SLC52A2Q9HAB3 445 aa32.64■■■□□ 2.82
STX1A-214ENST00000497980 SCN11AQ9UI33 1791 aa32.64■■■□□ 2.82
STX1A-214ENST00000497980 RNMTO43148 476 aaKnown RBP32.63■■■□□ 2.81
STX1A-214ENST00000497980 ITPK1Q13572 414 aa32.63■■■□□ 2.81
STX1A-214ENST00000497980 RBM42Q9BTD8 480 aaKnown RBP32.63■■■□□ 2.81
STX1A-214ENST00000497980 FHDC1Q9C0D6 1143 aaPredicted RBP32.62■■■□□ 2.81
STX1A-214ENST00000497980 COL24A1Q17RW2 1714 aa32.62■■■□□ 2.81
STX1A-214ENST00000497980 ZEB1P37275 1124 aaPredicted RBP32.6■■■□□ 2.81
STX1A-214ENST00000497980 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP32.59■■■□□ 2.81
STX1A-214ENST00000497980 GNPATO15228 680 aa32.59■■■□□ 2.81
STX1A-214ENST00000497980 U2AF1L5P0DN76 240 aaPredicted RBP32.59■■■□□ 2.81
STX1A-214ENST00000497980 U2AF1Q01081 240 aaKnown RBP eCLIP32.59■■■□□ 2.81
STX1A-214ENST00000497980 RSPH6AQ9H0K4 717 aa32.59■■■□□ 2.81
STX1A-214ENST00000497980 ADAMTS7Q9UKP4 1686 aa32.59■■■□□ 2.81
STX1A-214ENST00000497980 CNTNAP4Q9C0A0 1308 aa32.58■■■□□ 2.81
STX1A-214ENST00000497980 PRKAR2BP31323 418 aa32.58■■■□□ 2.81
STX1A-214ENST00000497980 SYT17Q9BSW7 474 aa32.58■■■□□ 2.81
STX1A-214ENST00000497980 RC3H1Q5TC82 1133 aaKnown RBP32.57■■■□□ 2.8
STX1A-214ENST00000497980 UBR3Q6ZT12 1888 aa32.57■■■□□ 2.8
STX1A-214ENST00000497980 GNAT3A8MTJ3 354 aa32.56■■■□□ 2.8
STX1A-214ENST00000497980 FCHSD2O94868 740 aa32.56■■■□□ 2.8
STX1A-214ENST00000497980 PHF14O94880 888 aa32.56■■■□□ 2.8
STX1A-214ENST00000497980 RALBP1Q15311 655 aa32.56■■■□□ 2.8
STX1A-214ENST00000497980 LGR6Q9HBX8 967 aa32.56■■■□□ 2.8
STX1A-214ENST00000497980 PTCD1O75127 700 aaKnown RBP32.55■■■□□ 2.8
STX1A-214ENST00000497980 SLC4A9Q96Q91 983 aa32.55■■■□□ 2.8
STX1A-214ENST00000497980 RTCBQ9Y3I0 505 aaKnown RBP32.55■■■□□ 2.8
STX1A-214ENST00000497980 ADRA2BP18089 450 aa32.54■■■□□ 2.8
STX1A-214ENST00000497980 CICQ96RK0 1608 aaPredicted RBP32.54■■■□□ 2.8
STX1A-214ENST00000497980 TEFQ10587 303 aa32.5■■■□□ 2.79
STX1A-214ENST00000497980 MSL1Q68DK7 614 aa32.5■■■□□ 2.79
STX1A-214ENST00000497980 AMIGO3Q86WK7 504 aa32.5■■■□□ 2.79
STX1A-214ENST00000497980 COL5A3P25940 1745 aaPredicted RBP32.5■■■□□ 2.79
STX1A-214ENST00000497980 NEFMP07197 916 aa32.49■■■□□ 2.79
STX1A-214ENST00000497980 DDX10Q13206 875 aaKnown RBP32.49■■■□□ 2.79
STX1A-214ENST00000497980 TRAPPC3LQ5T215 181 aa32.47■■■□□ 2.79
STX1A-214ENST00000497980 TTC5Q8N0Z6 440 aa32.47■■■□□ 2.79
STX1A-214ENST00000497980 PHACTR3Q96KR7 559 aa32.47■■■□□ 2.79
STX1A-214ENST00000497980 CEMIPQ8WUJ3 1361 aa32.46■■■□□ 2.79
STX1A-214ENST00000497980 RPS6KA4O75676 772 aa32.46■■■□□ 2.79
STX1A-214ENST00000497980 VSIG10Q8N0Z9 540 aa32.46■■■□□ 2.79
STX1A-214ENST00000497980 KLHL34Q8N239 644 aa32.46■■■□□ 2.79
STX1A-214ENST00000497980 CRKLP46109 303 aaKnown RBP32.44■■■□□ 2.78
STX1A-214ENST00000497980 RTF1Q92541 710 aaKnown RBP32.44■■■□□ 2.78
STX1A-214ENST00000497980 PNNQ9H307 717 aaKnown RBP32.44■■■□□ 2.78
STX1A-214ENST00000497980 KCPQ6ZWJ8 1503 aa32.43■■■□□ 2.78
STX1A-214ENST00000497980 VIRMAQ69YN4 1812 aaKnown RBP32.43■■■□□ 2.78
STX1A-214ENST00000497980 SLC39A6Q13433 755 aa32.43■■■□□ 2.78
STX1A-214ENST00000497980 IL17REQ8NFR9 667 aa32.43■■■□□ 2.78
STX1A-214ENST00000497980 TJP1Q07157 1748 aa32.42■■■□□ 2.78
STX1A-214ENST00000497980 HTATSF1O43719 755 aaKnown RBP32.4■■■□□ 2.78
STX1A-214ENST00000497980 RFC4P35249 363 aa32.4■■■□□ 2.78
STX1A-214ENST00000497980 CD2APQ9Y5K6 639 aa32.4■■■□□ 2.78
STX1A-214ENST00000497980 MYBBP1AQ9BQG0 1328 aaKnown RBP32.4■■■□□ 2.78
STX1A-214ENST00000497980 SMIM5Q71RC9 77 aa32.39■■■□□ 2.78
STX1A-214ENST00000497980 ZNF790Q6PG37 636 aa32.38■■■□□ 2.77
STX1A-214ENST00000497980 DNAJC10Q8IXB1 793 aa32.38■■■□□ 2.77
STX1A-214ENST00000497980 NLGN1Q8N2Q7 840 aa32.38■■■□□ 2.77
STX1A-214ENST00000497980 ARHGEF1Q92888 912 aaKnown RBP32.38■■■□□ 2.77
STX1A-214ENST00000497980 CCDC87Q9NVE4 849 aa32.37■■■□□ 2.77
STX1A-214ENST00000497980 UBR2Q8IWV8 1755 aa32.37■■■□□ 2.77
STX1A-214ENST00000497980 TEX13AQ9BXU3 409 aaPredicted RBP32.34■■■□□ 2.77
STX1A-214ENST00000497980 MAPK8IP3Q9UPT6 1336 aa32.33■■■□□ 2.77
STX1A-214ENST00000497980 SIPA1L3O60292 1781 aaPredicted RBP32.33■■■□□ 2.77
STX1A-214ENST00000497980 MYH14Q7Z406 1995 aaKnown RBP32.33■■■□□ 2.77
STX1A-214ENST00000497980 STARD3NLO95772 234 aa32.33■■■□□ 2.77
STX1A-214ENST00000497980 CYP19A1P11511 503 aaPredicted RBP32.33■■■□□ 2.77
STX1A-214ENST00000497980 INTS5Q6P9B9 1019 aaKnown RBP32.33■■■□□ 2.77
STX1A-214ENST00000497980 HEG1Q9ULI3 1381 aa32.32■■■□□ 2.77
STX1A-214ENST00000497980 BTBD11A6QL63 1104 aa32.32■■■□□ 2.76
STX1A-214ENST00000497980 FMNL2Q96PY5 1086 aa32.32■■■□□ 2.76
STX1A-214ENST00000497980 MMP10P09238 476 aa32.31■■■□□ 2.76
STX1A-214ENST00000497980 SOS1Q07889 1333 aaPredicted RBP32.3■■■□□ 2.76
STX1A-214ENST00000497980 USP42Q9H9J4 1324 aaKnown RBP32.3■■■□□ 2.76
STX1A-214ENST00000497980 GYS1P13807 737 aa32.3■■■□□ 2.76
STX1A-214ENST00000497980 GPR162Q16538 588 aa32.3■■■□□ 2.76
STX1A-214ENST00000497980 NLGN2Q8NFZ4 835 aa32.3■■■□□ 2.76
STX1A-214ENST00000497980 ZNF496Q96IT1 587 aaPredicted RBP32.3■■■□□ 2.76
STX1A-214ENST00000497980 PLEKHF1Q96S99 279 aa32.3■■■□□ 2.76
STX1A-214ENST00000497980 MCM10Q7L590 875 aa32.29■■■□□ 2.76
STX1A-214ENST00000497980 C4AP0C0L4 1744 aa32.29■■■□□ 2.76
STX1A-214ENST00000497980 YY1P25490 414 aa32.28■■■□□ 2.76
STX1A-214ENST00000497980 NFE2L2Q16236 605 aa32.26■■■□□ 2.75
STX1A-214ENST00000497980 ZBTB1Q9Y2K1 713 aa32.26■■■□□ 2.75
STX1A-214ENST00000497980 COL15A1P39059 1388 aa32.26■■■□□ 2.75
STX1A-214ENST00000497980 ZPR1O75312 459 aa32.25■■■□□ 2.75
STX1A-214ENST00000497980 PARP3Q9Y6F1 533 aa32.23■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms