RNA–Protein interactions for RNA: ENST00000497869.5

TNFRSF4-203, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 2

Gene TNFRSF4, Length 1,707 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-203ENST00000497869 VIRMAQ69YN4 1812 aaKnown RBP31.46■■■□□ 2.63
TNFRSF4-203ENST00000497869 RCAN3Q9UKA8 241 aa31.46■■■□□ 2.63
TNFRSF4-203ENST00000497869 TOGARAM1Q9Y4F4 1720 aa31.46■■■□□ 2.63
TNFRSF4-203ENST00000497869 SIPA1L3O60292 1781 aaPredicted RBP31.45■■■□□ 2.62
TNFRSF4-203ENST00000497869 ZNF772Q68DY9 489 aaPredicted RBP31.44■■■□□ 2.62
TNFRSF4-203ENST00000497869 SUPT16HQ9Y5B9 1047 aaKnown RBP31.44■■■□□ 2.62
TNFRSF4-203ENST00000497869 BTBD11A6QL63 1104 aa31.44■■■□□ 2.62
TNFRSF4-203ENST00000497869 BABAM1Q9NWV8 329 aa31.44■■■□□ 2.62
TNFRSF4-203ENST00000497869 ELL2O00472 640 aaPredicted RBP31.43■■■□□ 2.62
TNFRSF4-203ENST00000497869 ERVV-2B6SEH9 535 aa31.42■■■□□ 2.62
TNFRSF4-203ENST00000497869 A0A0G2JS52 829 aa31.41■■■□□ 2.62
TNFRSF4-203ENST00000497869 CABP4P57796 275 aa31.41■■■□□ 2.62
TNFRSF4-203ENST00000497869 MYT1Q01538 1121 aa31.41■■■□□ 2.62
TNFRSF4-203ENST00000497869 ILDR1Q86SU0 546 aaPredicted RBP31.41■■■□□ 2.62
TNFRSF4-203ENST00000497869 SEPT12Q8IYM1 358 aa31.41■■■□□ 2.62
TNFRSF4-203ENST00000497869 SLC39A6Q13433 755 aa31.41■■■□□ 2.62
TNFRSF4-203ENST00000497869 VAMP4O75379 141 aa31.4■■■□□ 2.62
TNFRSF4-203ENST00000497869 KDM3BQ7LBC6 1761 aa31.38■■■□□ 2.61
TNFRSF4-203ENST00000497869 EIF4A1P60842 406 aaKnown RBP31.38■■■□□ 2.61
TNFRSF4-203ENST00000497869 BCAR3O75815 825 aa31.36■■■□□ 2.61
TNFRSF4-203ENST00000497869 RARSP54136 660 aaKnown RBP31.36■■■□□ 2.61
TNFRSF4-203ENST00000497869 FAM182BQ5T319 152 aa31.36■■■□□ 2.61
TNFRSF4-203ENST00000497869 POTEAQ6S8J7 498 aa31.36■■■□□ 2.61
TNFRSF4-203ENST00000497869 TWISTNBQ3B726 338 aaPredicted RBP31.35■■■□□ 2.61
TNFRSF4-203ENST00000497869 PIGBQ92521 554 aa31.35■■■□□ 2.61
TNFRSF4-203ENST00000497869 RNF123Q5XPI4 1314 aa31.35■■■□□ 2.61
TNFRSF4-203ENST00000497869 RBM6P78332 1123 aaKnown RBP31.35■■■□□ 2.61
TNFRSF4-203ENST00000497869 ZNF790Q6PG37 636 aa31.35■■■□□ 2.61
TNFRSF4-203ENST00000497869 CT47B1P0C2W7 299 aaPredicted RBP31.32■■■□□ 2.61
TNFRSF4-203ENST00000497869 PRIM1P49642 420 aaKnown RBP31.32■■■□□ 2.61
TNFRSF4-203ENST00000497869 ACSBG1Q96GR2 724 aa31.32■■■□□ 2.61
TNFRSF4-203ENST00000497869 BCL2L13Q9BXK5 485 aa31.32■■■□□ 2.61
TNFRSF4-203ENST00000497869 HEG1Q9ULI3 1381 aa31.32■■■□□ 2.6
TNFRSF4-203ENST00000497869 SSH1Q8WYL5 1049 aa31.31■■■□□ 2.6
TNFRSF4-203ENST00000497869 TMOD3Q9NYL9 352 aa31.31■■■□□ 2.6
TNFRSF4-203ENST00000497869 BCL9O00512 1426 aa31.31■■■□□ 2.6
TNFRSF4-203ENST00000497869 PRAMEF22A3QJZ6 481 aa31.29■■■□□ 2.6
TNFRSF4-203ENST00000497869 TCERG1O14776 1098 aaKnown RBP31.29■■■□□ 2.6
TNFRSF4-203ENST00000497869 DOT1LQ8TEK3 1739 aa31.29■■■□□ 2.6
TNFRSF4-203ENST00000497869 KCNQ2O43526 872 aa31.29■■■□□ 2.6
TNFRSF4-203ENST00000497869 ZNF496Q96IT1 587 aaPredicted RBP31.29■■■□□ 2.6
TNFRSF4-203ENST00000497869 PTF1AQ7RTS3 328 aa31.28■■■□□ 2.6
TNFRSF4-203ENST00000497869 PLIN1O60240 522 aa31.27■■■□□ 2.6
TNFRSF4-203ENST00000497869 ASAP1Q9ULH1 1129 aa31.27■■■□□ 2.6
TNFRSF4-203ENST00000497869 SYTL4Q96C24 671 aaPredicted RBP31.27■■■□□ 2.6
TNFRSF4-203ENST00000497869 ATG3Q9NT62 314 aa31.27■■■□□ 2.6
TNFRSF4-203ENST00000497869 RXRBP28702 533 aa31.26■■■□□ 2.59
TNFRSF4-203ENST00000497869 ITGB4P16144 1822 aa31.26■■■□□ 2.59
TNFRSF4-203ENST00000497869 GIGYF1O75420 1035 aaPredicted RBP31.25■■■□□ 2.59
TNFRSF4-203ENST00000497869 RRP1P56182 461 aaKnown RBP31.25■■■□□ 2.59
TNFRSF4-203ENST00000497869 PAPPAQ13219 1627 aa31.25■■■□□ 2.59
TNFRSF4-203ENST00000497869 KCPQ6ZWJ8 1503 aa31.24■■■□□ 2.59
TNFRSF4-203ENST00000497869 RGS12O14924 1447 aa31.21■■■□□ 2.59
TNFRSF4-203ENST00000497869 TTC5Q8N0Z6 440 aa31.21■■■□□ 2.59
TNFRSF4-203ENST00000497869 SMC4Q9NTJ3 1288 aa31.21■■■□□ 2.59
TNFRSF4-203ENST00000497869 EP400Q96L91 3159 aa31.21■■■□□ 2.59
TNFRSF4-203ENST00000497869 IRX6P78412 446 aaPredicted RBP31.21■■■□□ 2.59
TNFRSF4-203ENST00000497869 ALDH1L2Q3SY69 923 aa31.21■■■□□ 2.59
TNFRSF4-203ENST00000497869 MRPL50Q8N5N7 158 aaKnown RBP31.21■■■□□ 2.59
TNFRSF4-203ENST00000497869 NECTIN2Q92692 538 aa31.21■■■□□ 2.59
TNFRSF4-203ENST00000497869 ZNF428Q96B54 188 aa31.21■■■□□ 2.59
TNFRSF4-203ENST00000497869 BRWD3Q6RI45 1802 aa31.2■■■□□ 2.59
TNFRSF4-203ENST00000497869 KRT27Q7Z3Y8 459 aa31.2■■■□□ 2.58
TNFRSF4-203ENST00000497869 PTCD1O75127 700 aaKnown RBP31.18■■■□□ 2.58
TNFRSF4-203ENST00000497869 UBR2Q8IWV8 1755 aa31.18■■■□□ 2.58
TNFRSF4-203ENST00000497869 FMNL2Q96PY5 1086 aa31.18■■■□□ 2.58
TNFRSF4-203ENST00000497869 TNNQ9UQP3 1299 aa31.18■■■□□ 2.58
TNFRSF4-203ENST00000497869 HOXB7P09629 217 aa31.17■■■□□ 2.58
TNFRSF4-203ENST00000497869 C20orf194Q5TEA3 1177 aa31.17■■■□□ 2.58
TNFRSF4-203ENST00000497869 SLC4A9Q96Q91 983 aa31.17■■■□□ 2.58
TNFRSF4-203ENST00000497869 SOS1Q07889 1333 aaPredicted RBP31.16■■■□□ 2.58
TNFRSF4-203ENST00000497869 EIF2S2P20042 333 aaKnown RBP31.15■■■□□ 2.58
TNFRSF4-203ENST00000497869 USP16Q9Y5T5 823 aa31.15■■■□□ 2.58
TNFRSF4-203ENST00000497869 BRPF1P55201 1214 aaPredicted RBP31.15■■■□□ 2.58
TNFRSF4-203ENST00000497869 HDGFL1Q5TGJ6 251 aa31.15■■■□□ 2.58
TNFRSF4-203ENST00000497869 C5P01031 1676 aa31.14■■■□□ 2.58
TNFRSF4-203ENST00000497869 SNRPA1P09661 255 aaKnown RBP31.13■■■□□ 2.57
TNFRSF4-203ENST00000497869 FRAT1Q92837 279 aaPredicted RBP31.13■■■□□ 2.57
TNFRSF4-203ENST00000497869 NOB1Q9ULX3 412 aaKnown RBP31.13■■■□□ 2.57
TNFRSF4-203ENST00000497869 KAT6BQ8WYB5 2073 aa31.11■■■□□ 2.57
TNFRSF4-203ENST00000497869 G2E3Q7L622 706 aa31.11■■■□□ 2.57
TNFRSF4-203ENST00000497869 SLC4A2P04920 1241 aa31.1■■■□□ 2.57
TNFRSF4-203ENST00000497869 CCDC30Q5VVM6 783 aa31.1■■■□□ 2.57
TNFRSF4-203ENST00000497869 PROSER3Q2NL68 480 aa31.1■■■□□ 2.57
TNFRSF4-203ENST00000497869 NHSQ6T4R5 1651 aa31.09■■■□□ 2.57
TNFRSF4-203ENST00000497869 ANXA1P04083 346 aa31.09■■■□□ 2.57
TNFRSF4-203ENST00000497869 RBM42Q9BTD8 480 aaKnown RBP31.09■■■□□ 2.57
TNFRSF4-203ENST00000497869 CHPF2Q9P2E5 772 aa31.09■■■□□ 2.57
TNFRSF4-203ENST00000497869 PDIA6Q15084 440 aa31.08■■■□□ 2.57
TNFRSF4-203ENST00000497869 FAM196AQ6ZSG2 479 aa31.07■■■□□ 2.56
TNFRSF4-203ENST00000497869 GTF3C3Q9Y5Q9 886 aa31.07■■■□□ 2.56
TNFRSF4-203ENST00000497869 PALLDQ8WX93 1383 aa31.06■■■□□ 2.56
TNFRSF4-203ENST00000497869 RLBP1P12271 317 aa31.06■■■□□ 2.56
TNFRSF4-203ENST00000497869 TRIM27P14373 513 aa31.06■■■□□ 2.56
TNFRSF4-203ENST00000497869 DNAJC10Q8IXB1 793 aa31.06■■■□□ 2.56
TNFRSF4-203ENST00000497869 SBF2Q86WG5 1849 aa31.06■■■□□ 2.56
TNFRSF4-203ENST00000497869 FKBP8Q14318 412 aa31.05■■■□□ 2.56
TNFRSF4-203ENST00000497869 PIP4K2AP48426 406 aaPredicted RBP31.04■■■□□ 2.56
TNFRSF4-203ENST00000497869 KIF16BQ96L93 1317 aa31.04■■■□□ 2.56
TNFRSF4-203ENST00000497869 ZKSCAN2Q63HK3 967 aa31.04■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms