RNA–Protein interactions for RNA: ENST00000497863.1

SHISA5-218, Transcript of shisa family member 5, humanhuman

TSL 2

Gene SHISA5, Length 972 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-218ENST00000497863 KIF24Q5T7B8 1368 aa21.66■■□□□ 1.06
SHISA5-218ENST00000497863 APLP1P51693 650 aa21.66■■□□□ 1.06
SHISA5-218ENST00000497863 HTRA3P83110 453 aa21.66■■□□□ 1.06
SHISA5-218ENST00000497863 CARD14Q9BXL6 1004 aa21.66■■□□□ 1.06
SHISA5-218ENST00000497863 BRCA1P38398 1863 aaKnown RBP21.66■■□□□ 1.06
SHISA5-218ENST00000497863 C4AP0C0L4 1744 aa21.66■■□□□ 1.06
SHISA5-218ENST00000497863 ARHGAP27Q6ZUM4 889 aa21.65■■□□□ 1.06
SHISA5-218ENST00000497863 ATG3Q9NT62 314 aa21.65■■□□□ 1.06
SHISA5-218ENST00000497863 KDRP35968 1356 aa21.64■■□□□ 1.06
SHISA5-218ENST00000497863 COL5A3P25940 1745 aaPredicted RBP21.64■■□□□ 1.06
SHISA5-218ENST00000497863 HMGB2P26583 209 aaKnown RBP21.64■■□□□ 1.05
SHISA5-218ENST00000497863 EYA1Q99502 592 aa21.64■■□□□ 1.05
SHISA5-218ENST00000497863 PHKG2P15735 406 aa21.63■■□□□ 1.05
SHISA5-218ENST00000497863 DPEP1P16444 411 aa21.63■■□□□ 1.05
SHISA5-218ENST00000497863 DNAJC5GQ8N7S2 189 aa21.63■■□□□ 1.05
SHISA5-218ENST00000497863 SLC4A9Q96Q91 983 aa21.63■■□□□ 1.05
SHISA5-218ENST00000497863 TOMM70O94826 608 aa21.62■■□□□ 1.05
SHISA5-218ENST00000497863 FCHSD2O94868 740 aa21.61■■□□□ 1.05
SHISA5-218ENST00000497863 RBM42Q9BTD8 480 aaKnown RBP21.61■■□□□ 1.05
SHISA5-218ENST00000497863 RTCBQ9Y3I0 505 aaKnown RBP21.6■■□□□ 1.05
SHISA5-218ENST00000497863 TRAPPC3LQ5T215 181 aa21.59■■□□□ 1.05
SHISA5-218ENST00000497863 IFNL2Q8IZJ0 200 aa21.59■■□□□ 1.05
SHISA5-218ENST00000497863 KCPQ6ZWJ8 1503 aa21.59■■□□□ 1.05
SHISA5-218ENST00000497863 MYH14Q7Z406 1995 aaKnown RBP21.58■■□□□ 1.05
SHISA5-218ENST00000497863 TGFB2P61812 414 aa21.58■■□□□ 1.05
SHISA5-218ENST00000497863 ARHGEF1Q92888 912 aaKnown RBP21.58■■□□□ 1.05
SHISA5-218ENST00000497863 ARFGEF1Q9Y6D6 1849 aa21.57■■□□□ 1.04
SHISA5-218ENST00000497863 GYS1P13807 737 aa21.57■■□□□ 1.04
SHISA5-218ENST00000497863 TNNT2P45379 298 aaPredicted RBP21.57■■□□□ 1.04
SHISA5-218ENST00000497863 C9orf131Q5VYM1 1079 aa21.57■■□□□ 1.04
SHISA5-218ENST00000497863 WASHC2AQ641Q2 1341 aa21.56■■□□□ 1.04
SHISA5-218ENST00000497863 SLC24A1O60721 1099 aa21.56■■□□□ 1.04
SHISA5-218ENST00000497863 CCDC87Q9NVE4 849 aa21.56■■□□□ 1.04
SHISA5-218ENST00000497863 CAPN15O75808 1086 aa21.55■■□□□ 1.04
SHISA5-218ENST00000497863 NLGN1Q8N2Q7 840 aa21.55■■□□□ 1.04
SHISA5-218ENST00000497863 ZNF831Q5JPB2 1677 aa21.55■■□□□ 1.04
SHISA5-218ENST00000497863 KCNA3P22001 575 aa21.54■■□□□ 1.04
SHISA5-218ENST00000497863 EIF4A2Q14240 407 aaKnown RBP21.54■■□□□ 1.04
SHISA5-218ENST00000497863 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.54■■□□□ 1.04
SHISA5-218ENST00000497863 POLKQ9UBT6 870 aa21.54■■□□□ 1.04
SHISA5-218ENST00000497863 PARP3Q9Y6F1 533 aa21.54■■□□□ 1.04
SHISA5-218ENST00000497863 KDM6AO15550 1401 aaPredicted RBP21.54■■□□□ 1.04
SHISA5-218ENST00000497863 RFC4P35249 363 aa21.53■■□□□ 1.04
SHISA5-218ENST00000497863 COL13A1Q5TAT6 717 aaPredicted RBP21.53■■□□□ 1.04
SHISA5-218ENST00000497863 SRP68Q9UHB9 627 aaKnown RBP21.53■■□□□ 1.04
SHISA5-218ENST00000497863 PCNTO95613 3336 aa21.52■■□□□ 1.04
SHISA5-218ENST00000497863 C16orf71Q8IYS4 520 aaPredicted RBP21.52■■□□□ 1.04
SHISA5-218ENST00000497863 CNTNAP4Q9C0A0 1308 aa21.52■■□□□ 1.03
SHISA5-218ENST00000497863 TJP1Q07157 1748 aa21.52■■□□□ 1.03
SHISA5-218ENST00000497863 RBM46Q8TBY0 533 aaKnown RBP21.51■■□□□ 1.03
SHISA5-218ENST00000497863 PTCD1O75127 700 aaKnown RBP21.5■■□□□ 1.03
SHISA5-218ENST00000497863 CHRNA5P30532 468 aa21.5■■□□□ 1.03
SHISA5-218ENST00000497863 DDR1Q08345 913 aa21.5■■□□□ 1.03
SHISA5-218ENST00000497863 CDCA8Q53HL2 280 aa21.5■■□□□ 1.03
SHISA5-218ENST00000497863 KLRG1Q96E93 195 aa21.5■■□□□ 1.03
SHISA5-218ENST00000497863 RNF181Q9P0P0 153 aa21.5■■□□□ 1.03
SHISA5-218ENST00000497863 PLEKHG2Q9H7P9 1386 aa21.49■■□□□ 1.03
SHISA5-218ENST00000497863 RPS6KA4O75676 772 aa21.49■■□□□ 1.03
SHISA5-218ENST00000497863 POLR3GLQ9BT43 218 aa21.49■■□□□ 1.03
SHISA5-218ENST00000497863 TNRC6CQ9HCJ0 1690 aaKnown RBP21.49■■□□□ 1.03
SHISA5-218ENST00000497863 SBF1O95248 1867 aa21.48■■□□□ 1.03
SHISA5-218ENST00000497863 ADRA2BP18089 450 aa21.48■■□□□ 1.03
SHISA5-218ENST00000497863 FKBP8Q14318 412 aa21.48■■□□□ 1.03
SHISA5-218ENST00000497863 RRAGCQ9HB90 399 aa21.48■■□□□ 1.03
SHISA5-218ENST00000497863 RC3H1Q5TC82 1133 aaKnown RBP21.47■■□□□ 1.03
SHISA5-218ENST00000497863 ZNF530Q6P9A1 599 aaPredicted RBP21.47■■□□□ 1.03
SHISA5-218ENST00000497863 DCAF5Q96JK2 942 aa21.47■■□□□ 1.03
SHISA5-218ENST00000497863 PIM2Q9P1W9 311 aa21.47■■□□□ 1.03
SHISA5-218ENST00000497863 ERVV-2B6SEH9 535 aa21.46■■□□□ 1.03
SHISA5-218ENST00000497863 CRKLP46109 303 aaKnown RBP21.46■■□□□ 1.03
SHISA5-218ENST00000497863 CABP4P57796 275 aa21.46■■□□□ 1.03
SHISA5-218ENST00000497863 RASSF7Q02833 373 aa21.46■■□□□ 1.03
SHISA5-218ENST00000497863 DALRD3Q5D0E6 543 aaKnown RBP21.46■■□□□ 1.03
SHISA5-218ENST00000497863 ADAMTS7Q9UKP4 1686 aa21.46■■□□□ 1.03
SHISA5-218ENST00000497863 AEBP1Q8IUX7 1158 aa21.44■■□□□ 1.02
SHISA5-218ENST00000497863 KDM2BQ8NHM5 1336 aa21.44■■□□□ 1.02
SHISA5-218ENST00000497863 USP42Q9H9J4 1324 aaKnown RBP21.44■■□□□ 1.02
SHISA5-218ENST00000497863 FSTL1Q12841 308 aa21.42■■□□□ 1.02
SHISA5-218ENST00000497863 TIAM2Q8IVF5 1701 aa21.42■■□□□ 1.02
SHISA5-218ENST00000497863 JMYQ8N9B5 988 aa21.42■■□□□ 1.02
SHISA5-218ENST00000497863 PLEKHO1Q53GL0 409 aaPredicted RBP21.41■■□□□ 1.02
SHISA5-218ENST00000497863 AFDNP55196 1824 aaKnown RBP21.41■■□□□ 1.02
SHISA5-218ENST00000497863 POLRMTO00411 1230 aaKnown RBP21.4■■□□□ 1.02
SHISA5-218ENST00000497863 HSP90AB1P08238 724 aaKnown RBP21.4■■□□□ 1.02
SHISA5-218ENST00000497863 TNS4Q8IZW8 715 aa21.4■■□□□ 1.02
SHISA5-218ENST00000497863 MTHFSP49914 203 aa21.39■■□□□ 1.01
SHISA5-218ENST00000497863 NFATC2IPQ8NCF5 419 aa21.39■■□□□ 1.01
SHISA5-218ENST00000497863 SCN11AQ9UI33 1791 aa21.38■■□□□ 1.01
SHISA5-218ENST00000497863 PRELPP51888 382 aa21.38■■□□□ 1.01
SHISA5-218ENST00000497863 USPL1Q5W0Q7 1092 aa21.37■■□□□ 1.01
SHISA5-218ENST00000497863 INTS5Q6P9B9 1019 aaKnown RBP21.37■■□□□ 1.01
SHISA5-218ENST00000497863 DLEC1Q9Y238 1755 aa21.37■■□□□ 1.01
SHISA5-218ENST00000497863 C1orf141Q5JVX7 400 aa21.36■■□□□ 1.01
SHISA5-218ENST00000497863 DNAJC10Q8IXB1 793 aa21.36■■□□□ 1.01
SHISA5-218ENST00000497863 SMC1BQ8NDV3 1235 aa21.36■■□□□ 1.01
SHISA5-218ENST00000497863 CCDC88AQ3V6T2 1871 aa21.36■■□□□ 1.01
SHISA5-218ENST00000497863 CARMIL3Q8ND23 1372 aa21.34■■□□□ 1.01
SHISA5-218ENST00000497863 VIRMAQ69YN4 1812 aaKnown RBP21.34■■□□□ 1.01
SHISA5-218ENST00000497863 NRXN2Q9P2S2 1712 aa21.33■■□□□ 1.01
SHISA5-218ENST00000497863 TM4SF1P30408 202 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms