RNA–Protein interactions for RNA: ENST00000497565.1

BRPF1-208, Transcript of bromodomain and PHD finger containing 1, humanhuman

TSL 3

Gene BRPF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1-208ENST00000497565 AKAP4Q5JQC9 854 aa17.56■□□□□ 0.4
BRPF1-208ENST00000497565 TUBGCP6Q96RT7 1819 aa17.55■□□□□ 0.4
BRPF1-208ENST00000497565 RC3H1Q5TC82 1133 aaKnown RBP17.54■□□□□ 0.4
BRPF1-208ENST00000497565 C4BP0C0L5 1744 aa17.54■□□□□ 0.4
BRPF1-208ENST00000497565 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.53■□□□□ 0.4
BRPF1-208ENST00000497565 LINC00116Q8NCU8 138 aa17.53■□□□□ 0.4
BRPF1-208ENST00000497565 ADRA2BP18089 450 aa17.52■□□□□ 0.4
BRPF1-208ENST00000497565 ITPK1Q13572 414 aa17.52■□□□□ 0.4
BRPF1-208ENST00000497565 NFATC2IPQ8NCF5 419 aa17.52■□□□□ 0.4
BRPF1-208ENST00000497565 CFAP53Q96M91 514 aa17.52■□□□□ 0.4
BRPF1-208ENST00000497565 RBM42Q9BTD8 480 aaKnown RBP17.52■□□□□ 0.4
BRPF1-208ENST00000497565 CD2APQ9Y5K6 639 aa17.52■□□□□ 0.4
BRPF1-208ENST00000497565 KDM6AO15550 1401 aaPredicted RBP17.52■□□□□ 0.4
BRPF1-208ENST00000497565 ZNF831Q5JPB2 1677 aa17.52■□□□□ 0.39
BRPF1-208ENST00000497565 RTCBQ9Y3I0 505 aaKnown RBP17.51■□□□□ 0.39
BRPF1-208ENST00000497565 GNPATO15228 680 aa17.5■□□□□ 0.39
BRPF1-208ENST00000497565 HMOX1P09601 288 aa17.5■□□□□ 0.39
BRPF1-208ENST00000497565 GPR162Q16538 588 aa17.5■□□□□ 0.39
BRPF1-208ENST00000497565 TRAPPC3LQ5T215 181 aa17.5■□□□□ 0.39
BRPF1-208ENST00000497565 CNTNAP4Q9C0A0 1308 aa17.49■□□□□ 0.39
BRPF1-208ENST00000497565 PHF14O94880 888 aa17.49■□□□□ 0.39
BRPF1-208ENST00000497565 KLHL34Q8N239 644 aa17.49■□□□□ 0.39
BRPF1-208ENST00000497565 SLC52A2Q9HAB3 445 aa17.49■□□□□ 0.39
BRPF1-208ENST00000497565 UBR3Q6ZT12 1888 aa17.48■□□□□ 0.39
BRPF1-208ENST00000497565 MSL1Q68DK7 614 aa17.48■□□□□ 0.39
BRPF1-208ENST00000497565 NUDCQ9Y266 331 aa17.48■□□□□ 0.39
BRPF1-208ENST00000497565 RNMTO43148 476 aaKnown RBP17.47■□□□□ 0.39
BRPF1-208ENST00000497565 GRIN3BO60391 1043 aa17.47■□□□□ 0.39
BRPF1-208ENST00000497565 RPS6KA4O75676 772 aa17.47■□□□□ 0.39
BRPF1-208ENST00000497565 NLGN1Q8N2Q7 840 aa17.47■□□□□ 0.39
BRPF1-208ENST00000497565 GAS2L2Q8NHY3 880 aa17.47■□□□□ 0.39
BRPF1-208ENST00000497565 SLC4A9Q96Q91 983 aa17.47■□□□□ 0.39
BRPF1-208ENST00000497565 U2SURPO15042 1029 aaKnown RBP17.46■□□□□ 0.39
BRPF1-208ENST00000497565 MTHFSDQ2M296 383 aaKnown RBP17.46■□□□□ 0.39
BRPF1-208ENST00000497565 PTCD1O75127 700 aaKnown RBP17.45■□□□□ 0.38
BRPF1-208ENST00000497565 AMIGO3Q86WK7 504 aa17.45■□□□□ 0.38
BRPF1-208ENST00000497565 SCN11AQ9UI33 1791 aa17.45■□□□□ 0.38
BRPF1-208ENST00000497565 RFC4P35249 363 aa17.44■□□□□ 0.38
BRPF1-208ENST00000497565 LGR6Q9HBX8 967 aa17.44■□□□□ 0.38
BRPF1-208ENST00000497565 COL3A1P02461 1466 aaPredicted RBP17.44■□□□□ 0.38
BRPF1-208ENST00000497565 CHD4Q14839 1912 aa17.43■□□□□ 0.38
BRPF1-208ENST00000497565 CNGB1Q14028 1251 aaPredicted RBP17.43■□□□□ 0.38
BRPF1-208ENST00000497565 VSIG10Q8N0Z9 540 aa17.43■□□□□ 0.38
BRPF1-208ENST00000497565 NLGN2Q8NFZ4 835 aa17.43■□□□□ 0.38
BRPF1-208ENST00000497565 GNAT3A8MTJ3 354 aa17.42■□□□□ 0.38
BRPF1-208ENST00000497565 PPP2R1AP30153 589 aa17.42■□□□□ 0.38
BRPF1-208ENST00000497565 ARHGEF1Q92888 912 aaKnown RBP17.42■□□□□ 0.38
BRPF1-208ENST00000497565 MRC1P22897 1456 aa17.42■□□□□ 0.38
BRPF1-208ENST00000497565 CRKLP46109 303 aaKnown RBP17.41■□□□□ 0.38
BRPF1-208ENST00000497565 FCHSD2O94868 740 aa17.4■□□□□ 0.38
BRPF1-208ENST00000497565 MMP10P09238 476 aa17.39■□□□□ 0.37
BRPF1-208ENST00000497565 TEFQ10587 303 aa17.39■□□□□ 0.37
BRPF1-208ENST00000497565 SMIM5Q71RC9 77 aa17.39■□□□□ 0.37
BRPF1-208ENST00000497565 PELP1Q8IZL8 1130 aaKnown RBP17.39■□□□□ 0.37
BRPF1-208ENST00000497565 COL5A3P25940 1745 aaPredicted RBP17.38■□□□□ 0.37
BRPF1-208ENST00000497565 UTRNP46939 3433 aa17.38■□□□□ 0.37
BRPF1-208ENST00000497565 TTC5Q8N0Z6 440 aa17.38■□□□□ 0.37
BRPF1-208ENST00000497565 TEX13AQ9BXU3 409 aaPredicted RBP17.38■□□□□ 0.37
BRPF1-208ENST00000497565 CICQ96RK0 1608 aaPredicted RBP17.38■□□□□ 0.37
BRPF1-208ENST00000497565 ADAMTS7Q9UKP4 1686 aa17.38■□□□□ 0.37
BRPF1-208ENST00000497565 U2AF1L5P0DN76 240 aaPredicted RBP17.37■□□□□ 0.37
BRPF1-208ENST00000497565 GYS1P13807 737 aa17.37■□□□□ 0.37
BRPF1-208ENST00000497565 PRKAR2BP31323 418 aa17.37■□□□□ 0.37
BRPF1-208ENST00000497565 TGFB2P61812 414 aa17.37■□□□□ 0.37
BRPF1-208ENST00000497565 U2AF1Q01081 240 aaKnown RBP eCLIP17.37■□□□□ 0.37
BRPF1-208ENST00000497565 RSPH6AQ9H0K4 717 aa17.37■□□□□ 0.37
BRPF1-208ENST00000497565 CCDC87Q9NVE4 849 aa17.37■□□□□ 0.37
BRPF1-208ENST00000497565 MYH14Q7Z406 1995 aaKnown RBP17.37■□□□□ 0.37
BRPF1-208ENST00000497565 STARD3NLO95772 234 aa17.36■□□□□ 0.37
BRPF1-208ENST00000497565 CYP19A1P11511 503 aaPredicted RBP17.36■□□□□ 0.37
BRPF1-208ENST00000497565 SLC39A6Q13433 755 aa17.36■□□□□ 0.37
BRPF1-208ENST00000497565 INTS5Q6P9B9 1019 aaKnown RBP17.36■□□□□ 0.37
BRPF1-208ENST00000497565 DNAJC10Q8IXB1 793 aa17.36■□□□□ 0.37
BRPF1-208ENST00000497565 ZNF784Q8NCA9 323 aaPredicted RBP17.36■□□□□ 0.37
BRPF1-208ENST00000497565 IL17REQ8NFR9 667 aa17.36■□□□□ 0.37
BRPF1-208ENST00000497565 PARP3Q9Y6F1 533 aa17.36■□□□□ 0.37
BRPF1-208ENST00000497565 HTATSF1O43719 755 aaKnown RBP17.35■□□□□ 0.37
BRPF1-208ENST00000497565 ZPR1O75312 459 aa17.35■□□□□ 0.37
BRPF1-208ENST00000497565 NEFMP07197 916 aa17.35■□□□□ 0.37
BRPF1-208ENST00000497565 YBX3P16989 372 aaKnown RBP eCLIP17.34■□□□□ 0.37
BRPF1-208ENST00000497565 ZNF790Q6PG37 636 aa17.34■□□□□ 0.37
BRPF1-208ENST00000497565 CEMIPQ8WUJ3 1361 aa17.34■□□□□ 0.37
BRPF1-208ENST00000497565 RTF1Q92541 710 aaKnown RBP17.34■□□□□ 0.37
BRPF1-208ENST00000497565 PHACTR3Q96KR7 559 aa17.34■□□□□ 0.37
BRPF1-208ENST00000497565 PNNQ9H307 717 aaKnown RBP17.34■□□□□ 0.37
BRPF1-208ENST00000497565 USP42Q9H9J4 1324 aaKnown RBP17.34■□□□□ 0.37
BRPF1-208ENST00000497565 SOS1Q07889 1333 aaPredicted RBP17.32■□□□□ 0.36
BRPF1-208ENST00000497565 A0A087WZG4 1122 aa17.32■□□□□ 0.36
BRPF1-208ENST00000497565 FMNL2Q96PY5 1086 aa17.32■□□□□ 0.36
BRPF1-208ENST00000497565 VIRMAQ69YN4 1812 aaKnown RBP17.32■□□□□ 0.36
BRPF1-208ENST00000497565 TJP1Q07157 1748 aa17.31■□□□□ 0.36
BRPF1-208ENST00000497565 RALBP1Q15311 655 aa17.31■□□□□ 0.36
BRPF1-208ENST00000497565 NARFQ9UHQ1 456 aa17.31■□□□□ 0.36
BRPF1-208ENST00000497565 KCPQ6ZWJ8 1503 aa17.31■□□□□ 0.36
BRPF1-208ENST00000497565 GOLGB1Q14789 3259 aaKnown RBP17.31■□□□□ 0.36
BRPF1-208ENST00000497565 BTBD11A6QL63 1104 aa17.3■□□□□ 0.36
BRPF1-208ENST00000497565 HEG1Q9ULI3 1381 aa17.29■□□□□ 0.36
BRPF1-208ENST00000497565 ZNF496Q96IT1 587 aaPredicted RBP17.29■□□□□ 0.36
BRPF1-208ENST00000497565 C10orf71Q711Q0 1435 aa17.29■□□□□ 0.36
BRPF1-208ENST00000497565 TM4SF1P30408 202 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms