RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 THBS1P07996 1170 aa8.1□□□□□ -1.11
CBX3-208ENST00000497498 SCNN1DP51172 638 aa8.1□□□□□ -1.11
CBX3-208ENST00000497498 C4orf17Q53FE4 359 aa8.1□□□□□ -1.11
CBX3-208ENST00000497498 GNASQ5JWF2 1037 aa8.1□□□□□ -1.11
CBX3-208ENST00000497498 TMEM214Q6NUQ4 689 aaKnown RBP8.1□□□□□ -1.11
CBX3-208ENST00000497498 PPARGC1BQ86YN6 1023 aaKnown RBP8.1□□□□□ -1.11
CBX3-208ENST00000497498 NUCKS1Q9H1E3 243 aaKnown RBP8.1□□□□□ -1.11
CBX3-208ENST00000497498 CELA2BP08218 269 aaPredicted RBP8.09□□□□□ -1.11
CBX3-208ENST00000497498 GTF2E1P29083 439 aaPredicted RBP8.09□□□□□ -1.11
CBX3-208ENST00000497498 PHKA2P46019 1235 aa8.09□□□□□ -1.11
CBX3-208ENST00000497498 TRERF1Q96PN7 1200 aa8.09□□□□□ -1.11
CBX3-208ENST00000497498 IGF1RP08069 1367 aa8.09□□□□□ -1.12
CBX3-208ENST00000497498 RNF225M0QZC1 329 aaPredicted RBP8.08□□□□□ -1.12
CBX3-208ENST00000497498 INHAP05111 366 aa8.08□□□□□ -1.12
CBX3-208ENST00000497498 RHBDD1Q8TEB9 315 aa8.08□□□□□ -1.12
CBX3-208ENST00000497498 ALG2Q9H553 416 aa8.08□□□□□ -1.12
CBX3-208ENST00000497498 GDF10P55107 478 aa8.07□□□□□ -1.12
CBX3-208ENST00000497498 TLR1Q15399 786 aa8.07□□□□□ -1.12
CBX3-208ENST00000497498 POM121Q96HA1 1249 aa8.07□□□□□ -1.12
CBX3-208ENST00000497498 GPAMQ9HCL2 828 aa8.07□□□□□ -1.12
CBX3-208ENST00000497498 PIK3CDO00329 1044 aa8.06□□□□□ -1.12
CBX3-208ENST00000497498 MSX1P28360 303 aa8.06□□□□□ -1.12
CBX3-208ENST00000497498 MAP3K10Q02779 954 aa8.06□□□□□ -1.12
CBX3-208ENST00000497498 RASSF7Q02833 373 aa8.06□□□□□ -1.12
CBX3-208ENST00000497498 UBAP2LQ14157 1087 aaKnown RBP8.06□□□□□ -1.12
CBX3-208ENST00000497498 LBRQ14739 615 aaKnown RBP8.06□□□□□ -1.12
CBX3-208ENST00000497498 CFHR5Q9BXR6 569 aa8.06□□□□□ -1.12
CBX3-208ENST00000497498 MX2P20592 715 aa8.05□□□□□ -1.12
CBX3-208ENST00000497498 FLIIQ13045 1269 aa8.05□□□□□ -1.12
CBX3-208ENST00000497498 NFATC2IPQ8NCF5 419 aa8.05□□□□□ -1.12
CBX3-208ENST00000497498 ACDQ96AP0 544 aa8.05□□□□□ -1.12
CBX3-208ENST00000497498 SLC4A9Q96Q91 983 aa8.05□□□□□ -1.12
CBX3-208ENST00000497498 PCDHGA11Q9Y5H2 935 aa8.05□□□□□ -1.12
CBX3-208ENST00000497498 TMEM229AB2RXF0 380 aa8.04□□□□□ -1.12
CBX3-208ENST00000497498 LZTS3O60299 673 aaPredicted RBP8.04□□□□□ -1.12
CBX3-208ENST00000497498 SMTNP53814 917 aa8.04□□□□□ -1.12
CBX3-208ENST00000497498 MARSP56192 900 aaKnown RBP8.04□□□□□ -1.12
CBX3-208ENST00000497498 WWC1Q8IX03 1113 aa8.04□□□□□ -1.12
CBX3-208ENST00000497498 TMEM151AQ8N4L1 468 aa8.04□□□□□ -1.12
CBX3-208ENST00000497498 ENAMQ9NRM1 1142 aa8.04□□□□□ -1.12
CBX3-208ENST00000497498 LRRC4BQ9NT99 713 aa8.04□□□□□ -1.12
CBX3-208ENST00000497498 NSFL1CQ9UNZ2 370 aaKnown RBP8.04□□□□□ -1.12
CBX3-208ENST00000497498 GDF11O95390 407 aa8.03□□□□□ -1.12
CBX3-208ENST00000497498 CSB-PGBD3P0DP91 1061 aa8.03□□□□□ -1.12
CBX3-208ENST00000497498 BCRP11274 1271 aa8.03□□□□□ -1.12
CBX3-208ENST00000497498 ZNF295-AS1Q8N0V1 137 aa8.03□□□□□ -1.12
CBX3-208ENST00000497498 PGBD3Q8N328 593 aa8.03□□□□□ -1.12
CBX3-208ENST00000497498 CRISPLD1Q9H336 500 aa8.03□□□□□ -1.12
CBX3-208ENST00000497498 RUBCNLQ9H714 662 aa8.03□□□□□ -1.12
CBX3-208ENST00000497498 RAD21O60216 631 aa8.02□□□□□ -1.13
CBX3-208ENST00000497498 MTFR1Q15390 333 aa8.02□□□□□ -1.13
CBX3-208ENST00000497498 EML3Q32P44 896 aa8.02□□□□□ -1.13
CBX3-208ENST00000497498 SCARF2Q96GP6 870 aaPredicted RBP8.02□□□□□ -1.13
CBX3-208ENST00000497498 PHF24Q9UPV7 400 aa8.02□□□□□ -1.13
CBX3-208ENST00000497498 CDK2AP1O14519 115 aa8.01□□□□□ -1.13
CBX3-208ENST00000497498 SKIP12755 728 aa8.01□□□□□ -1.13
CBX3-208ENST00000497498 MAP2K3P46734 347 aa8.01□□□□□ -1.13
CBX3-208ENST00000497498 PLA2G4AP47712 749 aa8.01□□□□□ -1.13
CBX3-208ENST00000497498 EFHC2Q5JST6 749 aa8.01□□□□□ -1.13
CBX3-208ENST00000497498 TBC1D9Q6ZT07 1266 aa8.01□□□□□ -1.13
CBX3-208ENST00000497498 C1orf216Q8TAB5 229 aa8.01□□□□□ -1.13
CBX3-208ENST00000497498 NIFKQ9BYG3 293 aaKnown RBP8.01□□□□□ -1.13
CBX3-208ENST00000497498 NDFIP2Q9NV92 336 aa8.01□□□□□ -1.13
CBX3-208ENST00000497498 IQSEC3Q9UPP2 1182 aaPredicted RBP8.01□□□□□ -1.13
CBX3-208ENST00000497498 NOD1Q9Y239 953 aa8.01□□□□□ -1.13
CBX3-208ENST00000497498 A6NJY4 79 aa8□□□□□ -1.13
CBX3-208ENST00000497498 UBTFP17480 764 aaKnown RBP8□□□□□ -1.13
CBX3-208ENST00000497498 ATP4AP20648 1035 aa8□□□□□ -1.13
CBX3-208ENST00000497498 IRS1P35568 1242 aa8□□□□□ -1.13
CBX3-208ENST00000497498 KANK3Q6NY19 840 aa8□□□□□ -1.13
CBX3-208ENST00000497498 KCTD17Q8N5Z5 321 aa8□□□□□ -1.13
CBX3-208ENST00000497498 SERTAD1Q9UHV2 236 aa8□□□□□ -1.13
CBX3-208ENST00000497498 ATXN7L1Q9ULK2 861 aaPredicted RBP8□□□□□ -1.13
CBX3-208ENST00000497498 OIP5O43482 229 aa7.99□□□□□ -1.13
CBX3-208ENST00000497498 ADAMTS19Q8TE59 1207 aa7.99□□□□□ -1.13
CBX3-208ENST00000497498 OXCT2Q9BYC2 517 aaPredicted RBP7.99□□□□□ -1.13
CBX3-208ENST00000497498 DNAAF2Q9NVR5 837 aaKnown RBP7.99□□□□□ -1.13
CBX3-208ENST00000497498 POM121CA8CG34 1229 aa7.98□□□□□ -1.13
CBX3-208ENST00000497498 BNIP3LO60238 219 aa7.98□□□□□ -1.13
CBX3-208ENST00000497498 GTF2IP78347 998 aa7.98□□□□□ -1.13
CBX3-208ENST00000497498 NCOA4Q13772 614 aa7.98□□□□□ -1.13
CBX3-208ENST00000497498 NLRP8Q86W28 1048 aa7.98□□□□□ -1.13
CBX3-208ENST00000497498 KLRG1Q96E93 195 aa7.98□□□□□ -1.13
CBX3-208ENST00000497498 USP17L5A8MUK1 530 aa7.97□□□□□ -1.13
CBX3-208ENST00000497498 BACH1O14867 736 aa7.97□□□□□ -1.13
CBX3-208ENST00000497498 FIGNL1Q6PIW4 674 aa7.97□□□□□ -1.13
CBX3-208ENST00000497498 ABHD17AQ96GS6 310 aa7.97□□□□□ -1.13
CBX3-208ENST00000497498 USP3Q9Y6I4 520 aa7.97□□□□□ -1.13
CBX3-208ENST00000497498 PLEKHM2Q8IWE5 1019 aa7.96□□□□□ -1.14
CBX3-208ENST00000497498 NEDD1Q8NHV4 660 aa7.96□□□□□ -1.14
CBX3-208ENST00000497498 AIDAQ96BJ3 306 aa7.96□□□□□ -1.14
CBX3-208ENST00000497498 ZCCHC2Q9C0B9 1178 aaKnown RBP7.96□□□□□ -1.14
CBX3-208ENST00000497498 ZDHHC3Q9NYG2 299 aa7.96□□□□□ -1.14
CBX3-208ENST00000497498 PCDHGC4Q9Y5F7 938 aa7.96□□□□□ -1.14
CBX3-208ENST00000497498 DNMT3AQ9Y6K1 912 aaPredicted RBP7.96□□□□□ -1.14
CBX3-208ENST00000497498 CNTNAP5Q8WYK1 1306 aa7.96□□□□□ -1.14
CBX3-208ENST00000497498 C2CD2LO14523 706 aa7.95□□□□□ -1.14
CBX3-208ENST00000497498 FGFR3P22607 806 aa7.95□□□□□ -1.14
CBX3-208ENST00000497498 TMEM132AQ24JP5 1023 aa7.95□□□□□ -1.14
CBX3-208ENST00000497498 NBPF1Q3BBV0 1214 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms