RNA–Protein interactions for RNA: ENST00000497335.1

BRWD3-205, Transcript of bromodomain and WD repeat domain containing 3, humanhuman

TSL 3

Gene BRWD3, Length 959 nt, Biotype processed transcript, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD3-205ENST00000497335 ZNF594Q96JF6 807 aaPredicted RBP11.76□□□□□ -0.53
BRWD3-205ENST00000497335 ARID3AQ99856 593 aa11.76□□□□□ -0.53
BRWD3-205ENST00000497335 C11orf95C9JLR9 678 aaPredicted RBP11.75□□□□□ -0.53
BRWD3-205ENST00000497335 ZBTB7BO15156 539 aaPredicted RBP11.75□□□□□ -0.53
BRWD3-205ENST00000497335 CRTC2Q53ET0 693 aaPredicted RBP11.75□□□□□ -0.53
BRWD3-205ENST00000497335 KIAA1024Q9UPX6 916 aa11.75□□□□□ -0.53
BRWD3-205ENST00000497335 TMEM229AB2RXF0 380 aa11.74□□□□□ -0.53
BRWD3-205ENST00000497335 MAN1A2O60476 641 aa11.74□□□□□ -0.53
BRWD3-205ENST00000497335 SRPK2P78362 688 aaKnown RBP11.74□□□□□ -0.53
BRWD3-205ENST00000497335 PTK7Q13308 1070 aa11.74□□□□□ -0.53
BRWD3-205ENST00000497335 CDCA8Q53HL2 280 aa11.73□□□□□ -0.53
BRWD3-205ENST00000497335 SLC27A3Q5K4L6 730 aa11.73□□□□□ -0.53
BRWD3-205ENST00000497335 RNF217Q8TC41 542 aa11.73□□□□□ -0.53
BRWD3-205ENST00000497335 HRH3Q9Y5N1 445 aa11.73□□□□□ -0.53
BRWD3-205ENST00000497335 STAU1O95793 577 aaKnown RBP11.72□□□□□ -0.53
BRWD3-205ENST00000497335 GTF2E1P29083 439 aaPredicted RBP11.72□□□□□ -0.53
BRWD3-205ENST00000497335 TLR1Q15399 786 aa11.72□□□□□ -0.53
BRWD3-205ENST00000497335 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.72□□□□□ -0.53
BRWD3-205ENST00000497335 FOXD4L5Q5VV16 416 aaPredicted RBP11.72□□□□□ -0.53
BRWD3-205ENST00000497335 SLC4A9Q96Q91 983 aa11.72□□□□□ -0.53
BRWD3-205ENST00000497335 ZNF358Q9NW07 568 aa11.72□□□□□ -0.53
BRWD3-205ENST00000497335 M0R2N6 131 aa11.71□□□□□ -0.53
BRWD3-205ENST00000497335 ATG7O95352 703 aa11.71□□□□□ -0.53
BRWD3-205ENST00000497335 SEC13P55735 322 aa11.71□□□□□ -0.53
BRWD3-205ENST00000497335 CENPCQ03188 943 aa11.71□□□□□ -0.53
BRWD3-205ENST00000497335 ELOAQ14241 798 aaKnown RBP11.71□□□□□ -0.53
BRWD3-205ENST00000497335 ANKMY2Q8IV38 441 aa11.71□□□□□ -0.53
BRWD3-205ENST00000497335 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.71□□□□□ -0.53
BRWD3-205ENST00000497335 SMTNP53814 917 aa11.7□□□□□ -0.54
BRWD3-205ENST00000497335 DPYDQ12882 1025 aa11.7□□□□□ -0.54
BRWD3-205ENST00000497335 ZNF787Q6DD87 383 aa11.7□□□□□ -0.54
BRWD3-205ENST00000497335 LYSMD3Q7Z3D4 306 aa11.7□□□□□ -0.54
BRWD3-205ENST00000497335 ZSCAN10Q96SZ4 725 aaPredicted RBP11.7□□□□□ -0.54
BRWD3-205ENST00000497335 GRIP2Q9C0E4 1043 aa11.7□□□□□ -0.54
BRWD3-205ENST00000497335 SERTAD1Q9UHV2 236 aa11.7□□□□□ -0.54
BRWD3-205ENST00000497335 DNMT3LQ9UJW3 386 aa11.7□□□□□ -0.54
BRWD3-205ENST00000497335 DKK1O94907 266 aa11.69□□□□□ -0.54
BRWD3-205ENST00000497335 SNRPBP14678 240 aaKnown RBP11.69□□□□□ -0.54
BRWD3-205ENST00000497335 FHDC1Q9C0D6 1143 aaPredicted RBP11.69□□□□□ -0.54
BRWD3-205ENST00000497335 NOVA2Q9UNW9 492 aaKnown RBP11.69□□□□□ -0.54
BRWD3-205ENST00000497335 FIGNL2A6NMB9 653 aa11.68□□□□□ -0.54
BRWD3-205ENST00000497335 NBPF15Q8N660 670 aa11.68□□□□□ -0.54
BRWD3-205ENST00000497335 FAM200AQ8TCP9 573 aa11.68□□□□□ -0.54
BRWD3-205ENST00000497335 ACIN1Q9UKV3 1341 aaKnown RBP11.67□□□□□ -0.54
BRWD3-205ENST00000497335 A6NJY4 79 aa11.67□□□□□ -0.54
BRWD3-205ENST00000497335 POTECB2RU33 542 aa11.67□□□□□ -0.54
BRWD3-205ENST00000497335 MTFR1Q15390 333 aa11.67□□□□□ -0.54
BRWD3-205ENST00000497335 GNASQ5JWF2 1037 aa11.67□□□□□ -0.54
BRWD3-205ENST00000497335 TMEM214Q6NUQ4 689 aaKnown RBP11.67□□□□□ -0.54
BRWD3-205ENST00000497335 ARXQ96QS3 562 aa11.67□□□□□ -0.54
BRWD3-205ENST00000497335 SFI1A8K8P3 1242 aa11.66□□□□□ -0.54
BRWD3-205ENST00000497335 PRICKLE2Q7Z3G6 844 aa11.66□□□□□ -0.54
BRWD3-205ENST00000497335 SPATA31C2B4DYI2 1134 aa11.65□□□□□ -0.54
BRWD3-205ENST00000497335 CDK2AP1O14519 115 aa11.65□□□□□ -0.54
BRWD3-205ENST00000497335 PPARGC1BQ86YN6 1023 aaKnown RBP11.65□□□□□ -0.54
BRWD3-205ENST00000497335 SOBPA7XYQ1 873 aa11.64□□□□□ -0.55
BRWD3-205ENST00000497335 WDR44Q5JSH3 913 aa11.64□□□□□ -0.55
BRWD3-205ENST00000497335 RHBDD1Q8TEB9 315 aa11.64□□□□□ -0.55
BRWD3-205ENST00000497335 TAS1R3Q7RTX0 852 aa11.63□□□□□ -0.55
BRWD3-205ENST00000497335 SCHIP1Q9P0W5 487 aaPredicted RBP11.63□□□□□ -0.55
BRWD3-205ENST00000497335 EPHA4P54764 986 aa11.62□□□□□ -0.55
BRWD3-205ENST00000497335 NBPF10Q6P3W6 841 aaKnown RBP11.62□□□□□ -0.55
BRWD3-205ENST00000497335 TSEN2Q8NCE0 465 aaKnown RBP11.62□□□□□ -0.55
BRWD3-205ENST00000497335 ZMIZ1Q9ULJ6 1067 aa11.62□□□□□ -0.55
BRWD3-205ENST00000497335 POU4F2Q12837 409 aa11.61□□□□□ -0.55
BRWD3-205ENST00000497335 SWI5Q1ZZU3 235 aa11.61□□□□□ -0.55
BRWD3-205ENST00000497335 TNS4Q8IZW8 715 aa11.61□□□□□ -0.55
BRWD3-205ENST00000497335 HINFPQ9BQA5 517 aa11.61□□□□□ -0.55
BRWD3-205ENST00000497335 NIFKQ9BYG3 293 aaKnown RBP11.61□□□□□ -0.55
BRWD3-205ENST00000497335 FOXK2Q01167 660 aa11.6□□□□□ -0.55
BRWD3-205ENST00000497335 STK32AQ8WU08 396 aa11.6□□□□□ -0.55
BRWD3-205ENST00000497335 IQSEC3Q9UPP2 1182 aaPredicted RBP11.6□□□□□ -0.55
BRWD3-205ENST00000497335 CSB-PGBD3P0DP91 1061 aa11.59□□□□□ -0.55
BRWD3-205ENST00000497335 PTSQ03393 145 aa11.59□□□□□ -0.55
BRWD3-205ENST00000497335 SLC9A9Q8IVB4 645 aa11.59□□□□□ -0.55
BRWD3-205ENST00000497335 RHOQP17081 205 aa11.58□□□□□ -0.56
BRWD3-205ENST00000497335 C4orf17Q53FE4 359 aa11.58□□□□□ -0.56
BRWD3-205ENST00000497335 CHMP3Q9Y3E7 222 aa11.58□□□□□ -0.56
BRWD3-205ENST00000497335 TMEM164Q5U3C3 297 aa11.57□□□□□ -0.56
BRWD3-205ENST00000497335 GAS2L2Q8NHY3 880 aa11.57□□□□□ -0.56
BRWD3-205ENST00000497335 TSPAN10Q9H1Z9 355 aaPredicted RBP11.57□□□□□ -0.56
BRWD3-205ENST00000497335 TIMMDC1Q9NPL8 285 aa11.57□□□□□ -0.56
BRWD3-205ENST00000497335 CABP1Q9NZU7 370 aa11.57□□□□□ -0.56
BRWD3-205ENST00000497335 PSMA6P60900 246 aaKnown RBP11.56□□□□□ -0.56
BRWD3-205ENST00000497335 DYRK1BQ9Y463 629 aa11.56□□□□□ -0.56
BRWD3-205ENST00000497335 A0A1B0GTH6 734 aa11.55□□□□□ -0.56
BRWD3-205ENST00000497335 SLC35F4A4IF30 521 aa11.55□□□□□ -0.56
BRWD3-205ENST00000497335 PLA2G4AP47712 749 aa11.55□□□□□ -0.56
BRWD3-205ENST00000497335 USP3Q9Y6I4 520 aa11.55□□□□□ -0.56
BRWD3-205ENST00000497335 SENP3-EIF4A1A0A087X0R7 540 aa11.54□□□□□ -0.56
BRWD3-205ENST00000497335 IGFBP4P22692 258 aa11.54□□□□□ -0.56
BRWD3-205ENST00000497335 PHKA2P46019 1235 aa11.54□□□□□ -0.56
BRWD3-205ENST00000497335 TEAD4Q15561 434 aa11.54□□□□□ -0.56
BRWD3-205ENST00000497335 NPAS3Q8IXF0 933 aa11.54□□□□□ -0.56
BRWD3-205ENST00000497335 ZNF295-AS1Q8N0V1 137 aa11.54□□□□□ -0.56
BRWD3-205ENST00000497335 USTQ9Y2C2 406 aa11.54□□□□□ -0.56
BRWD3-205ENST00000497335 PPP1R12BO60237 982 aaPredicted RBP11.53□□□□□ -0.56
BRWD3-205ENST00000497335 PDE4CQ08493 712 aa11.53□□□□□ -0.56
BRWD3-205ENST00000497335 NBPF1Q3BBV0 1214 aa11.53□□□□□ -0.56
BRWD3-205ENST00000497335 TBCELQ5QJ74 424 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms