RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 ADRA2BP18089 450 aa23.07■■□□□ 1.28
TRAPPC3-207ENST00000497251 TNNT2P45379 298 aaPredicted RBP23.07■■□□□ 1.28
TRAPPC3-207ENST00000497251 RC3H1Q5TC82 1133 aaKnown RBP23.07■■□□□ 1.28
TRAPPC3-207ENST00000497251 GNPATO15228 680 aa23.06■■□□□ 1.28
TRAPPC3-207ENST00000497251 PHF14O94880 888 aa23.06■■□□□ 1.28
TRAPPC3-207ENST00000497251 HSPA5P11021 654 aaKnown RBP23.06■■□□□ 1.28
TRAPPC3-207ENST00000497251 SENP3-EIF4A1A0A087X0R7 540 aa23.05■■□□□ 1.28
TRAPPC3-207ENST00000497251 ITPK1Q13572 414 aa23.05■■□□□ 1.28
TRAPPC3-207ENST00000497251 NLGN1Q8N2Q7 840 aa23.05■■□□□ 1.28
TRAPPC3-207ENST00000497251 TRAPPC3LQ5T215 181 aa23.04■■□□□ 1.28
TRAPPC3-207ENST00000497251 AMIGO3Q86WK7 504 aa23.04■■□□□ 1.28
TRAPPC3-207ENST00000497251 RTCBQ9Y3I0 505 aaKnown RBP23.04■■□□□ 1.28
TRAPPC3-207ENST00000497251 MORC1Q86VD1 984 aa23.03■■□□□ 1.28
TRAPPC3-207ENST00000497251 KNSTRNQ9Y448 316 aa23.02■■□□□ 1.28
TRAPPC3-207ENST00000497251 ZNF831Q5JPB2 1677 aa23.02■■□□□ 1.28
TRAPPC3-207ENST00000497251 KDRP35968 1356 aa23.01■■□□□ 1.27
TRAPPC3-207ENST00000497251 CABP4P57796 275 aa23.01■■□□□ 1.27
TRAPPC3-207ENST00000497251 CNTNAP4Q9C0A0 1308 aa23.01■■□□□ 1.27
TRAPPC3-207ENST00000497251 C1orf141Q5JVX7 400 aa23■■□□□ 1.27
TRAPPC3-207ENST00000497251 ZNF530Q6P9A1 599 aaPredicted RBP23■■□□□ 1.27
TRAPPC3-207ENST00000497251 MTHFSP49914 203 aa22.99■■□□□ 1.27
TRAPPC3-207ENST00000497251 TGFB2P61812 414 aa22.99■■□□□ 1.27
TRAPPC3-207ENST00000497251 RPS6KA4O75676 772 aa22.98■■□□□ 1.27
TRAPPC3-207ENST00000497251 RBM42Q9BTD8 480 aaKnown RBP22.98■■□□□ 1.27
TRAPPC3-207ENST00000497251 MMP10P09238 476 aa22.97■■□□□ 1.27
TRAPPC3-207ENST00000497251 GPBP1L1Q9HC44 474 aaPredicted RBP22.97■■□□□ 1.27
TRAPPC3-207ENST00000497251 ATP10DQ9P241 1426 aa22.96■■□□□ 1.27
TRAPPC3-207ENST00000497251 ADCY9O60503 1353 aa22.95■■□□□ 1.26
TRAPPC3-207ENST00000497251 RFC4P35249 363 aa22.95■■□□□ 1.26
TRAPPC3-207ENST00000497251 CCER1Q8TC90 406 aaPredicted RBP22.95■■□□□ 1.26
TRAPPC3-207ENST00000497251 SMIM5Q71RC9 77 aa22.94■■□□□ 1.26
TRAPPC3-207ENST00000497251 ARHGEF1Q92888 912 aaKnown RBP22.94■■□□□ 1.26
TRAPPC3-207ENST00000497251 SLC4A9Q96Q91 983 aa22.94■■□□□ 1.26
TRAPPC3-207ENST00000497251 IL13P35225 146 aa22.93■■□□□ 1.26
TRAPPC3-207ENST00000497251 SULT6B1Q6IMI4 303 aa22.93■■□□□ 1.26
TRAPPC3-207ENST00000497251 CCDC87Q9NVE4 849 aa22.93■■□□□ 1.26
TRAPPC3-207ENST00000497251 KDM6AO15550 1401 aaPredicted RBP22.92■■□□□ 1.26
TRAPPC3-207ENST00000497251 NFATC2IPQ8NCF5 419 aa22.91■■□□□ 1.26
TRAPPC3-207ENST00000497251 PARP3Q9Y6F1 533 aa22.91■■□□□ 1.26
TRAPPC3-207ENST00000497251 GYS1P13807 737 aa22.9■■□□□ 1.26
TRAPPC3-207ENST00000497251 AKAP4Q5JQC9 854 aa22.9■■□□□ 1.26
TRAPPC3-207ENST00000497251 AMER1Q5JTC6 1135 aaPredicted RBP22.9■■□□□ 1.26
TRAPPC3-207ENST00000497251 AEBP1Q8IUX7 1158 aa22.89■■□□□ 1.25
TRAPPC3-207ENST00000497251 KIF13BQ9NQT8 1826 aa22.87■■□□□ 1.25
TRAPPC3-207ENST00000497251 PTCD1O75127 700 aaKnown RBP22.87■■□□□ 1.25
TRAPPC3-207ENST00000497251 CRKLP46109 303 aaKnown RBP22.87■■□□□ 1.25
TRAPPC3-207ENST00000497251 C10orf71Q711Q0 1435 aa22.87■■□□□ 1.25
TRAPPC3-207ENST00000497251 PXDNLA1KZ92 1463 aa22.86■■□□□ 1.25
TRAPPC3-207ENST00000497251 COL5A3P25940 1745 aaPredicted RBP22.86■■□□□ 1.25
TRAPPC3-207ENST00000497251 CICQ96RK0 1608 aaPredicted RBP22.85■■□□□ 1.25
TRAPPC3-207ENST00000497251 SLC52A2Q9HAB3 445 aa22.84■■□□□ 1.25
TRAPPC3-207ENST00000497251 MYH14Q7Z406 1995 aaKnown RBP22.83■■□□□ 1.25
TRAPPC3-207ENST00000497251 BCS1LQ9Y276 419 aa22.83■■□□□ 1.25
TRAPPC3-207ENST00000497251 CEP350Q5VT06 3117 aa22.83■■□□□ 1.24
TRAPPC3-207ENST00000497251 A0A0G2JLW4 131 aa22.82■■□□□ 1.24
TRAPPC3-207ENST00000497251 USP42Q9H9J4 1324 aaKnown RBP22.82■■□□□ 1.24
TRAPPC3-207ENST00000497251 HSPA6P17066 643 aa22.81■■□□□ 1.24
TRAPPC3-207ENST00000497251 VSIG10Q8N0Z9 540 aa22.81■■□□□ 1.24
TRAPPC3-207ENST00000497251 PIM2Q9P1W9 311 aa22.81■■□□□ 1.24
TRAPPC3-207ENST00000497251 C4AP0C0L4 1744 aa22.81■■□□□ 1.24
TRAPPC3-207ENST00000497251 KIF7Q2M1P5 1343 aa22.81■■□□□ 1.24
TRAPPC3-207ENST00000497251 PER1O15534 1290 aaPredicted RBP22.8■■□□□ 1.24
TRAPPC3-207ENST00000497251 DPEP1P16444 411 aa22.8■■□□□ 1.24
TRAPPC3-207ENST00000497251 SCN11AQ9UI33 1791 aa22.79■■□□□ 1.24
TRAPPC3-207ENST00000497251 DIAPH1O60610 1272 aaKnown RBP22.79■■□□□ 1.24
TRAPPC3-207ENST00000497251 ZPR1O75312 459 aa22.79■■□□□ 1.24
TRAPPC3-207ENST00000497251 FCHSD2O94868 740 aa22.79■■□□□ 1.24
TRAPPC3-207ENST00000497251 INTS5Q6P9B9 1019 aaKnown RBP22.79■■□□□ 1.24
TRAPPC3-207ENST00000497251 WWC3Q9ULE0 1092 aa22.79■■□□□ 1.24
TRAPPC3-207ENST00000497251 NPC1L1Q9UHC9 1359 aa22.78■■□□□ 1.24
TRAPPC3-207ENST00000497251 RNMTO43148 476 aaKnown RBP22.78■■□□□ 1.24
TRAPPC3-207ENST00000497251 ARHGAP27Q6ZUM4 889 aa22.78■■□□□ 1.24
TRAPPC3-207ENST00000497251 ZNF526Q8TF50 670 aaPredicted RBP22.78■■□□□ 1.24
TRAPPC3-207ENST00000497251 FKBP8Q14318 412 aa22.77■■□□□ 1.24
TRAPPC3-207ENST00000497251 KIF3CO14782 793 aa22.76■■□□□ 1.23
TRAPPC3-207ENST00000497251 TM4SF1P30408 202 aa22.76■■□□□ 1.23
TRAPPC3-207ENST00000497251 DALRD3Q5D0E6 543 aaKnown RBP22.76■■□□□ 1.23
TRAPPC3-207ENST00000497251 MRC1P22897 1456 aa22.75■■□□□ 1.23
TRAPPC3-207ENST00000497251 KIAA1551Q9HCM1 1747 aa22.75■■□□□ 1.23
TRAPPC3-207ENST00000497251 CYP19A1P11511 503 aaPredicted RBP22.75■■□□□ 1.23
TRAPPC3-207ENST00000497251 KCNA3P22001 575 aa22.75■■□□□ 1.23
TRAPPC3-207ENST00000497251 LGR6Q9HBX8 967 aa22.75■■□□□ 1.23
TRAPPC3-207ENST00000497251 SOS1Q07889 1333 aaPredicted RBP22.75■■□□□ 1.23
TRAPPC3-207ENST00000497251 DNAJC10Q8IXB1 793 aa22.74■■□□□ 1.23
TRAPPC3-207ENST00000497251 SRP68Q9UHB9 627 aaKnown RBP22.74■■□□□ 1.23
TRAPPC3-207ENST00000497251 NARFQ9UHQ1 456 aa22.74■■□□□ 1.23
TRAPPC3-207ENST00000497251 TOMM70O94826 608 aa22.73■■□□□ 1.23
TRAPPC3-207ENST00000497251 HMOX1P09601 288 aa22.73■■□□□ 1.23
TRAPPC3-207ENST00000497251 MTHFSDQ2M296 383 aaKnown RBP22.73■■□□□ 1.23
TRAPPC3-207ENST00000497251 N4BP2Q86UW6 1770 aaPredicted RBP22.73■■□□□ 1.23
TRAPPC3-207ENST00000497251 POLRMTO00411 1230 aaKnown RBP22.72■■□□□ 1.23
TRAPPC3-207ENST00000497251 DDR1Q08345 913 aa22.72■■□□□ 1.23
TRAPPC3-207ENST00000497251 TJP1Q07157 1748 aa22.71■■□□□ 1.23
TRAPPC3-207ENST00000497251 STARD3NLO95772 234 aa22.71■■□□□ 1.23
TRAPPC3-207ENST00000497251 TEX13AQ9BXU3 409 aaPredicted RBP22.71■■□□□ 1.23
TRAPPC3-207ENST00000497251 BRCA1P38398 1863 aaKnown RBP22.71■■□□□ 1.23
TRAPPC3-207ENST00000497251 GAS2L2Q8NHY3 880 aa22.7■■□□□ 1.22
TRAPPC3-207ENST00000497251 ARFGEF1Q9Y6D6 1849 aa22.7■■□□□ 1.22
TRAPPC3-207ENST00000497251 A0A087WZG4 1122 aa22.69■■□□□ 1.22
TRAPPC3-207ENST00000497251 APLP1P51693 650 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms