RNA–Protein interactions for RNA: ENST00000496907.1

HMGCL-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 858 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-206ENST00000496907 HSPA1BP0DMV9 641 aaKnown RBP8.2□□□□□ -1.1
HMGCL-206ENST00000496907 DDB1Q16531 1140 aa8.2□□□□□ -1.1
HMGCL-206ENST00000496907 PTF1AQ7RTS3 328 aa8.2□□□□□ -1.1
HMGCL-206ENST00000496907 CRB1P82279 1406 aa8.2□□□□□ -1.1
HMGCL-206ENST00000496907 COL5A2P05997 1499 aaPredicted RBP8.19□□□□□ -1.1
HMGCL-206ENST00000496907 CFAP53Q96M91 514 aa8.19□□□□□ -1.1
HMGCL-206ENST00000496907 CDCA7Q9BWT1 371 aaPredicted RBP8.19□□□□□ -1.1
HMGCL-206ENST00000496907 KRTAP3-3Q9BYR6 98 aa8.19□□□□□ -1.1
HMGCL-206ENST00000496907 KRTAP3-2Q9BYR7 98 aa8.19□□□□□ -1.1
HMGCL-206ENST00000496907 WNK3Q9BYP7 1800 aa8.19□□□□□ -1.1
HMGCL-206ENST00000496907 SLC15A2Q16348 729 aa8.18□□□□□ -1.1
HMGCL-206ENST00000496907 TXNRD1Q16881 649 aa8.18□□□□□ -1.1
HMGCL-206ENST00000496907 CC2D1BQ5T0F9 858 aaKnown RBP8.18□□□□□ -1.1
HMGCL-206ENST00000496907 RTL1A6NKG5 1358 aa8.18□□□□□ -1.1
HMGCL-206ENST00000496907 MAP3K5Q99683 1374 aa8.18□□□□□ -1.1
HMGCL-206ENST00000496907 SLIT3O75094 1523 aa8.18□□□□□ -1.1
HMGCL-206ENST00000496907 SOX12O15370 315 aa8.17□□□□□ -1.1
HMGCL-206ENST00000496907 ANP32CO43423 234 aa8.17□□□□□ -1.1
HMGCL-206ENST00000496907 GRIN3BO60391 1043 aa8.17□□□□□ -1.1
HMGCL-206ENST00000496907 CSB-PGBD3P0DP91 1061 aa8.17□□□□□ -1.1
HMGCL-206ENST00000496907 TOM1L2Q6ZVM7 507 aa8.17□□□□□ -1.1
HMGCL-206ENST00000496907 BMP2KQ9NSY1 1161 aaPredicted RBP8.17□□□□□ -1.1
HMGCL-206ENST00000496907 POLKQ9UBT6 870 aa8.17□□□□□ -1.1
HMGCL-206ENST00000496907 NUDCQ9Y266 331 aa8.17□□□□□ -1.1
HMGCL-206ENST00000496907 MAP3K19Q56UN5 1328 aa8.17□□□□□ -1.1
HMGCL-206ENST00000496907 MON2Q7Z3U7 1717 aa8.17□□□□□ -1.1
HMGCL-206ENST00000496907 PPM1GO15355 546 aaPredicted RBP8.16□□□□□ -1.1
HMGCL-206ENST00000496907 ADCY9O60503 1353 aa8.16□□□□□ -1.1
HMGCL-206ENST00000496907 ABCC6O95255 1503 aa8.16□□□□□ -1.1
HMGCL-206ENST00000496907 INSRP06213 1382 aa8.16□□□□□ -1.1
HMGCL-206ENST00000496907 HOXC9P31274 260 aa8.16□□□□□ -1.1
HMGCL-206ENST00000496907 FLT4P35916 1363 aa8.16□□□□□ -1.1
HMGCL-206ENST00000496907 SMG6Q86US8 1419 aaKnown RBP8.16□□□□□ -1.1
HMGCL-206ENST00000496907 WDR17Q8IZU2 1322 aa8.16□□□□□ -1.1
HMGCL-206ENST00000496907 CARD10Q9BWT7 1032 aa8.16□□□□□ -1.1
HMGCL-206ENST00000496907 PNNQ9H307 717 aaKnown RBP8.16□□□□□ -1.1
HMGCL-206ENST00000496907 TNNT2P45379 298 aaPredicted RBP8.15□□□□□ -1.1
HMGCL-206ENST00000496907 MTHFSP49914 203 aa8.15□□□□□ -1.1
HMGCL-206ENST00000496907 RRS1Q15050 365 aaKnown RBP8.15□□□□□ -1.1
HMGCL-206ENST00000496907 MARCH10Q8NA82 808 aaPredicted RBP8.15□□□□□ -1.1
HMGCL-206ENST00000496907 ANKRD24Q8TF21 1146 aa8.15□□□□□ -1.1
HMGCL-206ENST00000496907 ERBB3P21860 1342 aa8.14□□□□□ -1.11
HMGCL-206ENST00000496907 DIAPH1O60610 1272 aaKnown RBP8.14□□□□□ -1.11
HMGCL-206ENST00000496907 SEC24BO95487 1268 aa8.14□□□□□ -1.11
HMGCL-206ENST00000496907 MLLT1Q03111 559 aaPredicted RBP8.14□□□□□ -1.11
HMGCL-206ENST00000496907 NLRP2Q9NX02 1062 aa8.14□□□□□ -1.11
HMGCL-206ENST00000496907 AXIN2Q9Y2T1 843 aa8.14□□□□□ -1.11
HMGCL-206ENST00000496907 PLEKHG2Q9H7P9 1386 aa8.13□□□□□ -1.11
HMGCL-206ENST00000496907 MYBBP1AQ9BQG0 1328 aaKnown RBP8.13□□□□□ -1.11
HMGCL-206ENST00000496907 TOMM70O94826 608 aa8.13□□□□□ -1.11
HMGCL-206ENST00000496907 POLD1P28340 1107 aa8.13□□□□□ -1.11
HMGCL-206ENST00000496907 PPP2R1AP30153 589 aa8.13□□□□□ -1.11
HMGCL-206ENST00000496907 HSP90AB2PQ58FF8 381 aa8.13□□□□□ -1.11
HMGCL-206ENST00000496907 PRKRIP1Q9H875 184 aaPredicted RBP8.13□□□□□ -1.11
HMGCL-206ENST00000496907 TRPC6Q9Y210 931 aa8.13□□□□□ -1.11
HMGCL-206ENST00000496907 PIK3C2AO00443 1686 aa8.13□□□□□ -1.11
HMGCL-206ENST00000496907 NHSQ6T4R5 1651 aa8.13□□□□□ -1.11
HMGCL-206ENST00000496907 USP54Q70EL1 1684 aa8.13□□□□□ -1.11
HMGCL-206ENST00000496907 PAPPAQ13219 1627 aa8.12□□□□□ -1.11
HMGCL-206ENST00000496907 EXOC5O00471 708 aa8.12□□□□□ -1.11
HMGCL-206ENST00000496907 NEFMP07197 916 aa8.12□□□□□ -1.11
HMGCL-206ENST00000496907 RAPGEF4Q8WZA2 1011 aa8.12□□□□□ -1.11
HMGCL-206ENST00000496907 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.12□□□□□ -1.11
HMGCL-206ENST00000496907 EMILIN1Q9Y6C2 1016 aa8.12□□□□□ -1.11
HMGCL-206ENST00000496907 NFAT5O94916 1531 aa8.12□□□□□ -1.11
HMGCL-206ENST00000496907 BCL9O00512 1426 aa8.12□□□□□ -1.11
HMGCL-206ENST00000496907 BTAF1O14981 1849 aa8.11□□□□□ -1.11
HMGCL-206ENST00000496907 IL2RBP14784 551 aa8.11□□□□□ -1.11
HMGCL-206ENST00000496907 TATP17735 454 aaPredicted RBP8.11□□□□□ -1.11
HMGCL-206ENST00000496907 FBLN1P23142 703 aa8.11□□□□□ -1.11
HMGCL-206ENST00000496907 HMGB2P26583 209 aaKnown RBP8.11□□□□□ -1.11
HMGCL-206ENST00000496907 AMOTQ4VCS5 1084 aa8.11□□□□□ -1.11
HMGCL-206ENST00000496907 LTV1Q96GA3 475 aaPredicted RBP8.11□□□□□ -1.11
HMGCL-206ENST00000496907 ACSBG1Q96GR2 724 aa8.11□□□□□ -1.11
HMGCL-206ENST00000496907 RGPD5Q99666 1765 aa8.11□□□□□ -1.11
HMGCL-206ENST00000496907 FCHSD2O94868 740 aa8.1□□□□□ -1.11
HMGCL-206ENST00000496907 IL13P35225 146 aa8.1□□□□□ -1.11
HMGCL-206ENST00000496907 ZNF827Q17R98 1081 aa8.1□□□□□ -1.11
HMGCL-206ENST00000496907 SPG7Q9UQ90 795 aa8.1□□□□□ -1.11
HMGCL-206ENST00000496907 KAT6BQ8WYB5 2073 aa8.1□□□□□ -1.11
HMGCL-206ENST00000496907 COL18A1P39060 1754 aa8.1□□□□□ -1.11
HMGCL-206ENST00000496907 TNRC18O15417 2968 aaPredicted RBP8.09□□□□□ -1.11
HMGCL-206ENST00000496907 POTEB3A0JP26 581 aa8.09□□□□□ -1.11
HMGCL-206ENST00000496907 CNGB1Q14028 1251 aaPredicted RBP8.09□□□□□ -1.11
HMGCL-206ENST00000496907 EIF4A2Q14240 407 aaKnown RBP8.09□□□□□ -1.11
HMGCL-206ENST00000496907 PLEKHO1Q53GL0 409 aaPredicted RBP8.09□□□□□ -1.11
HMGCL-206ENST00000496907 NBPF6Q5VWK0 638 aa8.09□□□□□ -1.11
HMGCL-206ENST00000496907 POTEBQ6S5H4 581 aa8.09□□□□□ -1.11
HMGCL-206ENST00000496907 NBPF4Q96M43 638 aa8.09□□□□□ -1.11
HMGCL-206ENST00000496907 EYA1Q99502 592 aa8.09□□□□□ -1.11
HMGCL-206ENST00000496907 NMRK2Q9NPI5 230 aa8.09□□□□□ -1.11
HMGCL-206ENST00000496907 MNX1P50219 401 aaPredicted RBP8.08□□□□□ -1.12
HMGCL-206ENST00000496907 DIEXFQ68CQ4 756 aaKnown RBP8.08□□□□□ -1.12
HMGCL-206ENST00000496907 ZCRB1Q8TBF4 217 aaKnown RBP8.08□□□□□ -1.12
HMGCL-206ENST00000496907 SLC16A10Q8TF71 515 aa8.08□□□□□ -1.12
HMGCL-206ENST00000496907 QSER1Q2KHR3 1735 aa8.08□□□□□ -1.12
HMGCL-206ENST00000496907 KIF20BQ96Q89 1820 aa8.08□□□□□ -1.12
HMGCL-206ENST00000496907 TUBGCP6Q96RT7 1819 aa8.08□□□□□ -1.12
HMGCL-206ENST00000496907 IGSF1Q8N6C5 1336 aa8.07□□□□□ -1.12
HMGCL-206ENST00000496907 U2SURPO15042 1029 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms