RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-210ENST00000496840 TRIM50Q86XT4 487 aa12.68□□□□□ -0.38
TARDBP-210ENST00000496840 INSM1Q01101 510 aaPredicted RBP12.67□□□□□ -0.38
TARDBP-210ENST00000496840 GNASQ5JWF2 1037 aa12.67□□□□□ -0.38
TARDBP-210ENST00000496840 PPARGC1BQ86YN6 1023 aaKnown RBP12.67□□□□□ -0.38
TARDBP-210ENST00000496840 SLC4A9Q96Q91 983 aa12.67□□□□□ -0.38
TARDBP-210ENST00000496840 GTF3C3Q9Y5Q9 886 aa12.67□□□□□ -0.38
TARDBP-210ENST00000496840 TMEM214Q6NUQ4 689 aaKnown RBP12.66□□□□□ -0.38
TARDBP-210ENST00000496840 GMCL1Q96IK5 515 aa12.66□□□□□ -0.38
TARDBP-210ENST00000496840 SMTNP53814 917 aa12.65□□□□□ -0.38
TARDBP-210ENST00000496840 SV2AQ7L0J3 742 aa12.65□□□□□ -0.38
TARDBP-210ENST00000496840 RHBDD1Q8TEB9 315 aa12.65□□□□□ -0.38
TARDBP-210ENST00000496840 TIMMDC1Q9NPL8 285 aa12.65□□□□□ -0.38
TARDBP-210ENST00000496840 ATP1A2P50993 1020 aa12.64□□□□□ -0.39
TARDBP-210ENST00000496840 GPR161Q8N6U8 529 aaKnown RBP12.64□□□□□ -0.39
TARDBP-210ENST00000496840 TFIP11Q9UBB9 837 aaKnown RBP12.64□□□□□ -0.39
TARDBP-210ENST00000496840 MAFBQ9Y5Q3 323 aaPredicted RBP12.64□□□□□ -0.39
TARDBP-210ENST00000496840 MTFR1Q15390 333 aa12.63□□□□□ -0.39
TARDBP-210ENST00000496840 TRIM22Q8IYM9 498 aa12.63□□□□□ -0.39
TARDBP-210ENST00000496840 VWA5B2Q8N398 1253 aa12.63□□□□□ -0.39
TARDBP-210ENST00000496840 CUEDC1Q9NWM3 386 aaPredicted RBP12.63□□□□□ -0.39
TARDBP-210ENST00000496840 CDC14CA4D256 554 aa12.62□□□□□ -0.39
TARDBP-210ENST00000496840 PALM3A6NDB9 673 aaPredicted RBP12.62□□□□□ -0.39
TARDBP-210ENST00000496840 BACH1O14867 736 aa12.62□□□□□ -0.39
TARDBP-210ENST00000496840 PSME1Q06323 249 aa12.62□□□□□ -0.39
TARDBP-210ENST00000496840 C4orf17Q53FE4 359 aa12.62□□□□□ -0.39
TARDBP-210ENST00000496840 PPP1R12CQ9BZL4 782 aa12.62□□□□□ -0.39
TARDBP-210ENST00000496840 MKRN1Q9UHC7 482 aaKnown RBP12.62□□□□□ -0.39
TARDBP-210ENST00000496840 A0A1B0GTH6 734 aa12.61□□□□□ -0.39
TARDBP-210ENST00000496840 SERTAD1Q9UHV2 236 aa12.61□□□□□ -0.39
TARDBP-210ENST00000496840 A6NJY4 79 aa12.6□□□□□ -0.39
TARDBP-210ENST00000496840 H7C1W4 665 aa12.6□□□□□ -0.39
TARDBP-210ENST00000496840 ZBTB7BO15156 539 aaPredicted RBP12.6□□□□□ -0.39
TARDBP-210ENST00000496840 F11P03951 625 aa12.6□□□□□ -0.39
TARDBP-210ENST00000496840 CLDN10P78369 228 aa12.6□□□□□ -0.39
TARDBP-210ENST00000496840 GAS2L1Q99501 681 aaPredicted RBP12.6□□□□□ -0.39
TARDBP-210ENST00000496840 ZMYND15Q9H091 742 aa12.6□□□□□ -0.39
TARDBP-210ENST00000496840 ZNF358Q9NW07 568 aa12.6□□□□□ -0.39
TARDBP-210ENST00000496840 ZNF777Q9ULD5 760 aaPredicted RBP12.6□□□□□ -0.39
TARDBP-210ENST00000496840 CDK2AP1O14519 115 aa12.59□□□□□ -0.39
TARDBP-210ENST00000496840 PHKA2P46019 1235 aa12.59□□□□□ -0.39
TARDBP-210ENST00000496840 LARGE2Q8N3Y3 721 aa12.59□□□□□ -0.39
TARDBP-210ENST00000496840 ZNF837Q96EG3 531 aaPredicted RBP12.59□□□□□ -0.39
TARDBP-210ENST00000496840 DNAAF2Q9NVR5 837 aaKnown RBP12.59□□□□□ -0.39
TARDBP-210ENST00000496840 RIPOR1Q6ZS17 1223 aa12.58□□□□□ -0.4
TARDBP-210ENST00000496840 OGFOD1Q8N543 542 aa12.58□□□□□ -0.4
TARDBP-210ENST00000496840 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.58□□□□□ -0.4
TARDBP-210ENST00000496840 IQSEC3Q9UPP2 1182 aaPredicted RBP12.58□□□□□ -0.4
TARDBP-210ENST00000496840 KIAA1024Q9UPX6 916 aa12.58□□□□□ -0.4
TARDBP-210ENST00000496840 KRT76Q01546 638 aa12.57□□□□□ -0.4
TARDBP-210ENST00000496840 DBN1Q16643 649 aa12.57□□□□□ -0.4
TARDBP-210ENST00000496840 CCDC102BQ68D86 513 aa12.57□□□□□ -0.4
TARDBP-210ENST00000496840 ZNF295-AS1Q8N0V1 137 aa12.57□□□□□ -0.4
TARDBP-210ENST00000496840 SIX5Q8N196 739 aa12.57□□□□□ -0.4
TARDBP-210ENST00000496840 TPCN2Q8NHX9 752 aa12.57□□□□□ -0.4
TARDBP-210ENST00000496840 COL25A1Q9BXS0 654 aaPredicted RBP12.57□□□□□ -0.4
TARDBP-210ENST00000496840 NIFKQ9BYG3 293 aaKnown RBP12.57□□□□□ -0.4
TARDBP-210ENST00000496840 LORP23490 312 aaPredicted RBP12.56□□□□□ -0.4
TARDBP-210ENST00000496840 SCHIP1Q9P0W5 487 aaPredicted RBP12.55□□□□□ -0.4
TARDBP-210ENST00000496840 M0R2N6 131 aa12.54□□□□□ -0.4
TARDBP-210ENST00000496840 EPHA4P54764 986 aa12.54□□□□□ -0.4
TARDBP-210ENST00000496840 LBRQ14739 615 aaKnown RBP12.54□□□□□ -0.4
TARDBP-210ENST00000496840 ZSCAN1Q8NBB4 408 aa12.54□□□□□ -0.4
TARDBP-210ENST00000496840 MSX1P28360 303 aa12.53□□□□□ -0.4
TARDBP-210ENST00000496840 PLA2G4AP47712 749 aa12.53□□□□□ -0.4
TARDBP-210ENST00000496840 FOXK2Q01167 660 aa12.53□□□□□ -0.4
TARDBP-210ENST00000496840 RNFT1Q5M7Z0 435 aa12.53□□□□□ -0.4
TARDBP-210ENST00000496840 FOXR1Q6PIV2 292 aa12.53□□□□□ -0.4
TARDBP-210ENST00000496840 C1orf216Q8TAB5 229 aa12.53□□□□□ -0.4
TARDBP-210ENST00000496840 CNTNAP3BQ96NU0 1288 aa12.53□□□□□ -0.4
TARDBP-210ENST00000496840 CNTNAP3Q9BZ76 1288 aa12.53□□□□□ -0.4
TARDBP-210ENST00000496840 STK17AQ9UEE5 414 aa12.53□□□□□ -0.4
TARDBP-210ENST00000496840 USP3Q9Y6I4 520 aa12.53□□□□□ -0.4
TARDBP-210ENST00000496840 DKK1O94907 266 aa12.52□□□□□ -0.41
TARDBP-210ENST00000496840 RASA1P20936 1047 aa12.52□□□□□ -0.41
TARDBP-210ENST00000496840 KANK4Q5T7N3 995 aaPredicted RBP12.52□□□□□ -0.41
TARDBP-210ENST00000496840 NUCKS1Q9H1E3 243 aaKnown RBP12.52□□□□□ -0.41
TARDBP-210ENST00000496840 GPAMQ9HCL2 828 aa12.52□□□□□ -0.41
TARDBP-210ENST00000496840 LMOD1P29536 600 aaPredicted RBP12.51□□□□□ -0.41
TARDBP-210ENST00000496840 CFAP70Q5T0N1 1121 aa12.51□□□□□ -0.41
TARDBP-210ENST00000496840 CRISPLD1Q9H336 500 aa12.51□□□□□ -0.41
TARDBP-210ENST00000496840 GAS6Q14393 721 aa12.5□□□□□ -0.41
TARDBP-210ENST00000496840 ZNF594Q96JF6 807 aaPredicted RBP12.5□□□□□ -0.41
TARDBP-210ENST00000496840 THBS1P07996 1170 aa12.49□□□□□ -0.41
TARDBP-210ENST00000496840 CSB-PGBD3P0DP91 1061 aa12.49□□□□□ -0.41
TARDBP-210ENST00000496840 LARP1Q6PKG0 1096 aaKnown RBP12.49□□□□□ -0.41
TARDBP-210ENST00000496840 PGBD3Q8N328 593 aa12.49□□□□□ -0.41
TARDBP-210ENST00000496840 GTPBP3Q969Y2 492 aaKnown RBP12.49□□□□□ -0.41
TARDBP-210ENST00000496840 VRTNQ9H8Y1 702 aa12.49□□□□□ -0.41
TARDBP-210ENST00000496840 ZDHHC3Q9NYG2 299 aa12.49□□□□□ -0.41
TARDBP-210ENST00000496840 RBM19Q9Y4C8 960 aaKnown RBP12.49□□□□□ -0.41
TARDBP-210ENST00000496840 LOC100996750A0A140TA64 210 aa12.48□□□□□ -0.41
TARDBP-210ENST00000496840 FAM196BA6NMK8 535 aa12.48□□□□□ -0.41
TARDBP-210ENST00000496840 ATP4AP20648 1035 aa12.48□□□□□ -0.41
TARDBP-210ENST00000496840 NBPF1Q3BBV0 1214 aa12.48□□□□□ -0.41
TARDBP-210ENST00000496840 TNS4Q8IZW8 715 aa12.48□□□□□ -0.41
TARDBP-210ENST00000496840 TRERF1Q96PN7 1200 aa12.48□□□□□ -0.41
TARDBP-210ENST00000496840 KRTAP4-6Q9BYQ5 205 aa12.48□□□□□ -0.41
TARDBP-210ENST00000496840 CABP1Q9NZU7 370 aa12.48□□□□□ -0.41
TARDBP-210ENST00000496840 SLURP2P0DP57 97 aa12.47□□□□□ -0.41
TARDBP-210ENST00000496840 PTK7Q13308 1070 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms