RNA–Protein interactions for RNA: ENST00000496818.2

CACNA1C-229, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-229ENST00000496818 RGPD1P0DJD0 1748 aa8.32□□□□□ -1.08
CACNA1C-229ENST00000496818 MS4A1P11836 297 aa8.31□□□□□ -1.08
CACNA1C-229ENST00000496818 BCL2L12Q9HB09 334 aa8.31□□□□□ -1.08
CACNA1C-229ENST00000496818 FAM198AQ9UFP1 575 aa8.31□□□□□ -1.08
CACNA1C-229ENST00000496818 ADGRG1Q9Y653 693 aa8.31□□□□□ -1.08
CACNA1C-229ENST00000496818 EP400Q96L91 3159 aa8.3□□□□□ -1.08
CACNA1C-229ENST00000496818 ITSN1Q15811 1721 aa8.3□□□□□ -1.08
CACNA1C-229ENST00000496818 PLEKHG3A1L390 1219 aa8.3□□□□□ -1.08
CACNA1C-229ENST00000496818 OATP04181 439 aa8.3□□□□□ -1.08
CACNA1C-229ENST00000496818 FAM196AQ6ZSG2 479 aa8.3□□□□□ -1.08
CACNA1C-229ENST00000496818 METTL3Q86U44 580 aaKnown RBP8.3□□□□□ -1.08
CACNA1C-229ENST00000496818 KCNK17Q96T54 332 aa8.3□□□□□ -1.08
CACNA1C-229ENST00000496818 STRN4Q9NRL3 753 aa8.3□□□□□ -1.08
CACNA1C-229ENST00000496818 SPATA31A1Q5TZJ5 1347 aa8.29□□□□□ -1.08
CACNA1C-229ENST00000496818 SSH2Q76I76 1423 aa8.29□□□□□ -1.08
CACNA1C-229ENST00000496818 CLCN1P35523 988 aa8.29□□□□□ -1.08
CACNA1C-229ENST00000496818 PXYLP1Q8TE99 480 aa8.29□□□□□ -1.08
CACNA1C-229ENST00000496818 TSKSQ9UJT2 592 aa8.29□□□□□ -1.08
CACNA1C-229ENST00000496818 POLR3AO14802 1390 aaPredicted RBP8.29□□□□□ -1.08
CACNA1C-229ENST00000496818 NRKQ7Z2Y5 1582 aa8.29□□□□□ -1.08
CACNA1C-229ENST00000496818 BRWD3Q6RI45 1802 aa8.29□□□□□ -1.08
CACNA1C-229ENST00000496818 PHRF1Q9P1Y6 1649 aaKnown RBP8.29□□□□□ -1.08
CACNA1C-229ENST00000496818 ERBB3P21860 1342 aa8.29□□□□□ -1.08
CACNA1C-229ENST00000496818 SSTR3P32745 418 aaPredicted RBP8.28□□□□□ -1.08
CACNA1C-229ENST00000496818 ZEB1P37275 1124 aaPredicted RBP8.28□□□□□ -1.08
CACNA1C-229ENST00000496818 EVA1CP58658 441 aa8.28□□□□□ -1.08
CACNA1C-229ENST00000496818 R3HDM1Q15032 1099 aaKnown RBP8.28□□□□□ -1.08
CACNA1C-229ENST00000496818 CHRNA2Q15822 529 aa8.28□□□□□ -1.08
CACNA1C-229ENST00000496818 FAM182BQ5T319 152 aa8.28□□□□□ -1.08
CACNA1C-229ENST00000496818 TTC13Q8NBP0 860 aa8.28□□□□□ -1.08
CACNA1C-229ENST00000496818 NUDT16Q96DE0 195 aaKnown RBP8.28□□□□□ -1.08
CACNA1C-229ENST00000496818 DDRGK1Q96HY6 314 aa8.28□□□□□ -1.08
CACNA1C-229ENST00000496818 GPCPD1Q9NPB8 672 aa8.28□□□□□ -1.08
CACNA1C-229ENST00000496818 USP35Q9P2H5 1018 aa8.28□□□□□ -1.08
CACNA1C-229ENST00000496818 ARHGEF28Q8N1W1 1705 aaKnown RBP8.28□□□□□ -1.08
CACNA1C-229ENST00000496818 CRYBG1Q9Y4K1 1723 aa8.28□□□□□ -1.08
CACNA1C-229ENST00000496818 CPDO75976 1380 aa8.27□□□□□ -1.09
CACNA1C-229ENST00000496818 PPP1R3GB7ZBB8 358 aa8.27□□□□□ -1.09
CACNA1C-229ENST00000496818 C3orf80F5H4A9 247 aa8.27□□□□□ -1.09
CACNA1C-229ENST00000496818 TRIM37O94972 964 aa8.27□□□□□ -1.09
CACNA1C-229ENST00000496818 PSEN2P49810 448 aa8.27□□□□□ -1.09
CACNA1C-229ENST00000496818 PDE3BQ13370 1112 aa8.27□□□□□ -1.09
CACNA1C-229ENST00000496818 PROX2Q3B8N5 592 aa8.27□□□□□ -1.09
CACNA1C-229ENST00000496818 VARS2Q5ST30 1063 aaKnown RBP8.27□□□□□ -1.09
CACNA1C-229ENST00000496818 NUDT18Q6ZVK8 323 aa8.27□□□□□ -1.09
CACNA1C-229ENST00000496818 RBM46Q8TBY0 533 aaKnown RBP8.27□□□□□ -1.09
CACNA1C-229ENST00000496818 MARVELD3Q96A59 401 aa8.27□□□□□ -1.09
CACNA1C-229ENST00000496818 RGPD8O14715 1765 aaPredicted RBP8.27□□□□□ -1.09
CACNA1C-229ENST00000496818 TOPAZ1Q8N9V7 1692 aa8.27□□□□□ -1.09
CACNA1C-229ENST00000496818 TNS1Q9HBL0 1735 aaKnown RBP8.26□□□□□ -1.09
CACNA1C-229ENST00000496818 C11orf95C9JLR9 678 aaPredicted RBP8.26□□□□□ -1.09
CACNA1C-229ENST00000496818 SMAPO00193 183 aa8.26□□□□□ -1.09
CACNA1C-229ENST00000496818 ST18O60284 1047 aa8.26□□□□□ -1.09
CACNA1C-229ENST00000496818 APBA3O96018 575 aa8.26□□□□□ -1.09
CACNA1C-229ENST00000496818 ZC3H6P61129 1189 aaKnown RBP8.26□□□□□ -1.09
CACNA1C-229ENST00000496818 SRPK2P78362 688 aaKnown RBP8.26□□□□□ -1.09
CACNA1C-229ENST00000496818 EZH2Q15910 746 aaKnown RBP8.26□□□□□ -1.09
CACNA1C-229ENST00000496818 NUTM2GQ5VZR2 741 aa8.26□□□□□ -1.09
CACNA1C-229ENST00000496818 TCP11L2Q8N4U5 519 aa8.26□□□□□ -1.09
CACNA1C-229ENST00000496818 ABTB2Q8N961 1025 aa8.26□□□□□ -1.09
CACNA1C-229ENST00000496818 TMUB1Q9BVT8 246 aa8.26□□□□□ -1.09
CACNA1C-229ENST00000496818 CDK19Q9BWU1 502 aa8.26□□□□□ -1.09
CACNA1C-229ENST00000496818 RBM27Q9P2N5 1060 aaKnown RBP8.26□□□□□ -1.09
CACNA1C-229ENST00000496818 DAXXQ9UER7 740 aaPredicted RBP8.26□□□□□ -1.09
CACNA1C-229ENST00000496818 PNMA3Q9UL41 463 aa8.26□□□□□ -1.09
CACNA1C-229ENST00000496818 PPIP5K1Q6PFW1 1433 aa8.26□□□□□ -1.09
CACNA1C-229ENST00000496818 USP19O94966 1318 aa8.26□□□□□ -1.09
CACNA1C-229ENST00000496818 ACEP12821 1306 aa8.26□□□□□ -1.09
CACNA1C-229ENST00000496818 SRCAPQ6ZRS2 3230 aa8.25□□□□□ -1.09
CACNA1C-229ENST00000496818 BRD4O60885 1362 aaPredicted RBP8.25□□□□□ -1.09
CACNA1C-229ENST00000496818 NBPF8Q3BBV2 869 aa8.25□□□□□ -1.09
CACNA1C-229ENST00000496818 NBPF14Q5TI25 921 aa8.25□□□□□ -1.09
CACNA1C-229ENST00000496818 NLRP13Q86W25 1043 aa8.25□□□□□ -1.09
CACNA1C-229ENST00000496818 AXIN2Q9Y2T1 843 aa8.25□□□□□ -1.09
CACNA1C-229ENST00000496818 THRAP3Q9Y2W1 955 aaKnown RBP8.25□□□□□ -1.09
CACNA1C-229ENST00000496818 OVOS2A0A0G2JMS6 1433 aa8.25□□□□□ -1.09
CACNA1C-229ENST00000496818 OVOS2A0A0J9YW53 1432 aa8.25□□□□□ -1.09
CACNA1C-229ENST00000496818 OVOS2Q6IE36 1432 aa8.25□□□□□ -1.09
CACNA1C-229ENST00000496818 COL5A2P05997 1499 aaPredicted RBP8.25□□□□□ -1.09
CACNA1C-229ENST00000496818 TRIM6-TRIM34B2RNG4 842 aa8.24□□□□□ -1.09
CACNA1C-229ENST00000496818 FAM163AQ96GL9 167 aaPredicted RBP8.24□□□□□ -1.09
CACNA1C-229ENST00000496818 PPP1R1BQ9UD71 204 aaPredicted RBP8.24□□□□□ -1.09
CACNA1C-229ENST00000496818 CENPJQ9HC77 1338 aaPredicted RBP8.24□□□□□ -1.09
CACNA1C-229ENST00000496818 CRB1P82279 1406 aa8.23□□□□□ -1.09
CACNA1C-229ENST00000496818 RCCD1A6NED2 376 aa8.23□□□□□ -1.09
CACNA1C-229ENST00000496818 EMP3P54852 163 aa8.23□□□□□ -1.09
CACNA1C-229ENST00000496818 LARP1Q6PKG0 1096 aaKnown RBP8.23□□□□□ -1.09
CACNA1C-229ENST00000496818 PACS2Q86VP3 889 aa8.23□□□□□ -1.09
CACNA1C-229ENST00000496818 TATDN2Q93075 761 aa8.23□□□□□ -1.09
CACNA1C-229ENST00000496818 CAMKK2Q96RR4 588 aa8.23□□□□□ -1.09
CACNA1C-229ENST00000496818 BEGAINQ9BUH8 593 aa8.23□□□□□ -1.09
CACNA1C-229ENST00000496818 FAM217BQ9NTX9 383 aaPredicted RBP8.23□□□□□ -1.09
CACNA1C-229ENST00000496818 LMO7Q8WWI1 1683 aa8.23□□□□□ -1.09
CACNA1C-229ENST00000496818 USP6P35125 1406 aa8.22□□□□□ -1.09
CACNA1C-229ENST00000496818 CAMTA1Q9Y6Y1 1673 aa8.22□□□□□ -1.09
CACNA1C-229ENST00000496818 ZBTB7CA1YPR0 619 aa8.22□□□□□ -1.09
CACNA1C-229ENST00000496818 FAM205CA6NFA0 338 aa8.22□□□□□ -1.09
CACNA1C-229ENST00000496818 EYA1Q99502 592 aa8.22□□□□□ -1.09
CACNA1C-229ENST00000496818 KIAA1210Q9ULL0 1709 aa8.22□□□□□ -1.09
CACNA1C-229ENST00000496818 NINLQ9Y2I6 1382 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms