RNA–Protein interactions for RNA: ENST00000496771.5

TSPAN6-203, Transcript of tetraspanin 6, humanhuman

TSL 3

Gene TSPAN6, Length 1,025 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6-203ENST00000496771 LINC00116Q8NCU8 138 aa26.54■■□□□ 1.84
TSPAN6-203ENST00000496771 C4BP0C0L5 1744 aa26.53■■□□□ 1.84
TSPAN6-203ENST00000496771 ITPK1Q13572 414 aa26.53■■□□□ 1.84
TSPAN6-203ENST00000496771 KLHL34Q8N239 644 aa26.53■■□□□ 1.84
TSPAN6-203ENST00000496771 MSL1Q68DK7 614 aa26.52■■□□□ 1.84
TSPAN6-203ENST00000496771 AMIGO3Q86WK7 504 aa26.52■■□□□ 1.84
TSPAN6-203ENST00000496771 PHF14O94880 888 aa26.51■■□□□ 1.83
TSPAN6-203ENST00000496771 RBM42Q9BTD8 480 aaKnown RBP26.51■■□□□ 1.83
TSPAN6-203ENST00000496771 FLAD1Q8NFF5 587 aa26.5■■□□□ 1.83
TSPAN6-203ENST00000496771 U2SURPO15042 1029 aaKnown RBP26.49■■□□□ 1.83
TSPAN6-203ENST00000496771 AKAP4Q5JQC9 854 aa26.48■■□□□ 1.83
TSPAN6-203ENST00000496771 NFATC2IPQ8NCF5 419 aa26.48■■□□□ 1.83
TSPAN6-203ENST00000496771 SLC4A9Q96Q91 983 aa26.48■■□□□ 1.83
TSPAN6-203ENST00000496771 COL3A1P02461 1466 aaPredicted RBP26.48■■□□□ 1.83
TSPAN6-203ENST00000496771 COL24A1Q17RW2 1714 aa26.48■■□□□ 1.83
TSPAN6-203ENST00000496771 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.46■■□□□ 1.83
TSPAN6-203ENST00000496771 GNPATO15228 680 aa26.45■■□□□ 1.82
TSPAN6-203ENST00000496771 MTHFSDQ2M296 383 aaKnown RBP26.45■■□□□ 1.82
TSPAN6-203ENST00000496771 LGR6Q9HBX8 967 aa26.45■■□□□ 1.82
TSPAN6-203ENST00000496771 MAP3K5Q99683 1374 aa26.45■■□□□ 1.82
TSPAN6-203ENST00000496771 UBR3Q6ZT12 1888 aa26.45■■□□□ 1.82
TSPAN6-203ENST00000496771 PTCD1O75127 700 aaKnown RBP26.43■■□□□ 1.82
TSPAN6-203ENST00000496771 SSFA2P28290 1259 aa26.43■■□□□ 1.82
TSPAN6-203ENST00000496771 SCN11AQ9UI33 1791 aa26.41■■□□□ 1.82
TSPAN6-203ENST00000496771 RNMTO43148 476 aaKnown RBP26.41■■□□□ 1.82
TSPAN6-203ENST00000496771 CFAP53Q96M91 514 aa26.41■■□□□ 1.82
TSPAN6-203ENST00000496771 UTRNP46939 3433 aa26.4■■□□□ 1.82
TSPAN6-203ENST00000496771 YY1P25490 414 aa26.4■■□□□ 1.82
TSPAN6-203ENST00000496771 PPP2R1AP30153 589 aa26.4■■□□□ 1.82
TSPAN6-203ENST00000496771 SLC52A2Q9HAB3 445 aa26.4■■□□□ 1.82
TSPAN6-203ENST00000496771 NLGN2Q8NFZ4 835 aa26.39■■□□□ 1.82
TSPAN6-203ENST00000496771 RTCBQ9Y3I0 505 aaKnown RBP26.37■■□□□ 1.81
TSPAN6-203ENST00000496771 ZNF831Q5JPB2 1677 aa26.35■■□□□ 1.81
TSPAN6-203ENST00000496771 SLC39A6Q13433 755 aa26.35■■□□□ 1.81
TSPAN6-203ENST00000496771 GPR162Q16538 588 aa26.35■■□□□ 1.81
TSPAN6-203ENST00000496771 TRAPPC3LQ5T215 181 aa26.35■■□□□ 1.81
TSPAN6-203ENST00000496771 PELP1Q8IZL8 1130 aaKnown RBP26.35■■□□□ 1.81
TSPAN6-203ENST00000496771 RC3H1Q5TC82 1133 aaKnown RBP26.34■■□□□ 1.81
TSPAN6-203ENST00000496771 CNTNAP4Q9C0A0 1308 aa26.34■■□□□ 1.81
TSPAN6-203ENST00000496771 COL5A3P25940 1745 aaPredicted RBP26.34■■□□□ 1.81
TSPAN6-203ENST00000496771 NUDCQ9Y266 331 aa26.33■■□□□ 1.81
TSPAN6-203ENST00000496771 PRKAR2BP31323 418 aa26.32■■□□□ 1.8
TSPAN6-203ENST00000496771 GAS2L2Q8NHY3 880 aa26.32■■□□□ 1.8
TSPAN6-203ENST00000496771 VIRMAQ69YN4 1812 aaKnown RBP26.32■■□□□ 1.8
TSPAN6-203ENST00000496771 MRC1P22897 1456 aa26.31■■□□□ 1.8
TSPAN6-203ENST00000496771 RPS6KA4O75676 772 aa26.31■■□□□ 1.8
TSPAN6-203ENST00000496771 ARHGEF1Q92888 912 aaKnown RBP26.31■■□□□ 1.8
TSPAN6-203ENST00000496771 PHACTR3Q96KR7 559 aa26.31■■□□□ 1.8
TSPAN6-203ENST00000496771 RSPH6AQ9H0K4 717 aa26.31■■□□□ 1.8
TSPAN6-203ENST00000496771 GOLGB1Q14789 3259 aaKnown RBP26.3■■□□□ 1.8
TSPAN6-203ENST00000496771 U2AF1L5P0DN76 240 aaPredicted RBP26.3■■□□□ 1.8
TSPAN6-203ENST00000496771 CRKLP46109 303 aaKnown RBP26.3■■□□□ 1.8
TSPAN6-203ENST00000496771 U2AF1Q01081 240 aaKnown RBP eCLIP26.3■■□□□ 1.8
TSPAN6-203ENST00000496771 GNAT3A8MTJ3 354 aa26.29■■□□□ 1.8
TSPAN6-203ENST00000496771 MYH14Q7Z406 1995 aaKnown RBP26.29■■□□□ 1.8
TSPAN6-203ENST00000496771 ADAMTS7Q9UKP4 1686 aa26.28■■□□□ 1.8
TSPAN6-203ENST00000496771 DNAJC10Q8IXB1 793 aa26.28■■□□□ 1.8
TSPAN6-203ENST00000496771 IL17REQ8NFR9 667 aa26.28■■□□□ 1.8
TSPAN6-203ENST00000496771 CD2APQ9Y5K6 639 aa26.28■■□□□ 1.8
TSPAN6-203ENST00000496771 TJP1Q07157 1748 aa26.28■■□□□ 1.8
TSPAN6-203ENST00000496771 ADRA2BP18089 450 aa26.27■■□□□ 1.8
TSPAN6-203ENST00000496771 RFC4P35249 363 aa26.27■■□□□ 1.8
TSPAN6-203ENST00000496771 MMP10P09238 476 aa26.25■■□□□ 1.79
TSPAN6-203ENST00000496771 TEFQ10587 303 aa26.25■■□□□ 1.79
TSPAN6-203ENST00000496771 INTS5Q6P9B9 1019 aaKnown RBP26.24■■□□□ 1.79
TSPAN6-203ENST00000496771 KCPQ6ZWJ8 1503 aa26.24■■□□□ 1.79
TSPAN6-203ENST00000496771 GYS1P13807 737 aa26.23■■□□□ 1.79
TSPAN6-203ENST00000496771 NLGN1Q8N2Q7 840 aa26.23■■□□□ 1.79
TSPAN6-203ENST00000496771 YBX3P16989 372 aaKnown RBP eCLIP26.22■■□□□ 1.79
TSPAN6-203ENST00000496771 TTC5Q8N0Z6 440 aa26.22■■□□□ 1.79
TSPAN6-203ENST00000496771 CICQ96RK0 1608 aaPredicted RBP26.21■■□□□ 1.79
TSPAN6-203ENST00000496771 FCHSD2O94868 740 aa26.21■■□□□ 1.79
TSPAN6-203ENST00000496771 CCDC87Q9NVE4 849 aa26.21■■□□□ 1.79
TSPAN6-203ENST00000496771 SRP68Q9UHB9 627 aaKnown RBP26.21■■□□□ 1.79
TSPAN6-203ENST00000496771 CYP19A1P11511 503 aaPredicted RBP26.2■■□□□ 1.78
TSPAN6-203ENST00000496771 DDX10Q13206 875 aaKnown RBP26.2■■□□□ 1.78
TSPAN6-203ENST00000496771 C4AP0C0L4 1744 aa26.19■■□□□ 1.78
TSPAN6-203ENST00000496771 WWC3Q9ULE0 1092 aa26.19■■□□□ 1.78
TSPAN6-203ENST00000496771 ZNF790Q6PG37 636 aa26.17■■□□□ 1.78
TSPAN6-203ENST00000496771 VSIG10Q8N0Z9 540 aa26.17■■□□□ 1.78
TSPAN6-203ENST00000496771 ZNF496Q96IT1 587 aaPredicted RBP26.17■■□□□ 1.78
TSPAN6-203ENST00000496771 ZBTB1Q9Y2K1 713 aa26.17■■□□□ 1.78
TSPAN6-203ENST00000496771 CHD4Q14839 1912 aa26.17■■□□□ 1.78
TSPAN6-203ENST00000496771 CEMIPQ8WUJ3 1361 aa26.16■■□□□ 1.78
TSPAN6-203ENST00000496771 SOS1Q07889 1333 aaPredicted RBP26.15■■□□□ 1.78
TSPAN6-203ENST00000496771 USP42Q9H9J4 1324 aaKnown RBP26.15■■□□□ 1.78
TSPAN6-203ENST00000496771 UBR2Q8IWV8 1755 aa26.15■■□□□ 1.78
TSPAN6-203ENST00000496771 GRIN3BO60391 1043 aa26.15■■□□□ 1.78
TSPAN6-203ENST00000496771 MCM10Q7L590 875 aa26.15■■□□□ 1.78
TSPAN6-203ENST00000496771 RTF1Q92541 710 aaKnown RBP26.15■■□□□ 1.78
TSPAN6-203ENST00000496771 PARP3Q9Y6F1 533 aa26.15■■□□□ 1.78
TSPAN6-203ENST00000496771 FKBP8Q14318 412 aa26.14■■□□□ 1.78
TSPAN6-203ENST00000496771 SIPA1L3O60292 1781 aaPredicted RBP26.14■■□□□ 1.78
TSPAN6-203ENST00000496771 BTBD11A6QL63 1104 aa26.13■■□□□ 1.77
TSPAN6-203ENST00000496771 KCNQ3O43525 872 aa26.13■■□□□ 1.77
TSPAN6-203ENST00000496771 CANXP27824 592 aaKnown RBP26.13■■□□□ 1.77
TSPAN6-203ENST00000496771 DCTN1Q14203 1278 aa26.13■■□□□ 1.77
TSPAN6-203ENST00000496771 HEG1Q9ULI3 1381 aa26.12■■□□□ 1.77
TSPAN6-203ENST00000496771 ZPR1O75312 459 aa26.12■■□□□ 1.77
TSPAN6-203ENST00000496771 USPL1Q5W0Q7 1092 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms