RNA–Protein interactions for RNA: ENST00000496762.1

RBM17-212, Transcript of RNA binding motif protein 17, human

TSL 2

Gene RBM17, Length 1,585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM17-212	ENST00000496762	TRIM50	Q86XT4	487 aa		10.89	□□□□□ -0.67
RBM17-212	ENST00000496762	DNAAF2	Q9NVR5	837 aa	Known RBP	10.89	□□□□□ -0.67
RBM17-212	ENST00000496762	SENP3-EIF4A1	A0A087X0R7	540 aa		10.88	□□□□□ -0.67
RBM17-212	ENST00000496762	WASL	O00401	505 aa	Predicted RBP	10.88	□□□□□ -0.67
RBM17-212	ENST00000496762	DKK1	O94907	266 aa		10.88	□□□□□ -0.67
RBM17-212	ENST00000496762	POU4F2	Q12837	409 aa		10.88	□□□□□ -0.67
RBM17-212	ENST00000496762	NXF1	Q9UBU9	619 aa	Known RBP	10.88	□□□□□ -0.67
RBM17-212	ENST00000496762	RASA1	P20936	1047 aa		10.87	□□□□□ -0.67
RBM17-212	ENST00000496762	CRTC2	Q53ET0	693 aa	Predicted RBP	10.87	□□□□□ -0.67
RBM17-212	ENST00000496762	ZNF358	Q9NW07	568 aa		10.87	□□□□□ -0.67
RBM17-212	ENST00000496762	ATP1A2	P50993	1020 aa		10.86	□□□□□ -0.67
RBM17-212	ENST00000496762	CCDC102B	Q68D86	513 aa		10.86	□□□□□ -0.67
RBM17-212	ENST00000496762	TPCN2	Q8NHX9	752 aa		10.86	□□□□□ -0.67
RBM17-212	ENST00000496762	ZNF594	Q96JF6	807 aa	Predicted RBP	10.86	□□□□□ -0.67
RBM17-212	ENST00000496762	SLC4A9	Q96Q91	983 aa		10.86	□□□□□ -0.67
RBM17-212	ENST00000496762	VRTN	Q9H8Y1	702 aa		10.86	□□□□□ -0.67
RBM17-212	ENST00000496762	SLC35F4	A4IF30	521 aa		10.86	□□□□□ -0.67
RBM17-212	ENST00000496762	SUPT5H	O00267	1087 aa	Known RBP	10.86	□□□□□ -0.67
RBM17-212	ENST00000496762	TERT	O14746	1132 aa	Known RBP	10.86	□□□□□ -0.67
RBM17-212	ENST00000496762	SMTN	P53814	917 aa		10.86	□□□□□ -0.67
RBM17-212	ENST00000496762	TLR1	Q15399	786 aa		10.86	□□□□□ -0.67
RBM17-212	ENST00000496762	LARGE2	Q8N3Y3	721 aa		10.86	□□□□□ -0.67
RBM17-212	ENST00000496762	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	10.86	□□□□□ -0.67
RBM17-212	ENST00000496762	NACAD	O15069	1562 aa		10.85	□□□□□ -0.67
RBM17-212	ENST00000496762	SRPK2	P78362	688 aa	Known RBP	10.85	□□□□□ -0.67
RBM17-212	ENST00000496762	NFX1	Q12986	1120 aa	Known RBP	10.85	□□□□□ -0.67
RBM17-212	ENST00000496762	LCE2C	Q5TA81	110 aa		10.85	□□□□□ -0.67
RBM17-212	ENST00000496762	ERICH6	Q7L0X2	663 aa		10.85	□□□□□ -0.67
RBM17-212	ENST00000496762	CCDC82	Q8N4S0	544 aa		10.85	□□□□□ -0.67
RBM17-212	ENST00000496762	BICRA	Q9NZM4	1560 aa		10.85	□□□□□ -0.67
RBM17-212	ENST00000496762	SPATA31C2	B4DYI2	1134 aa		10.84	□□□□□ -0.67
RBM17-212	ENST00000496762	PPFIA3	O75145	1194 aa		10.84	□□□□□ -0.67
RBM17-212	ENST00000496762	PTK7	Q13308	1070 aa		10.84	□□□□□ -0.67
RBM17-212	ENST00000496762	NBPF10	Q6P3W6	841 aa	Known RBP	10.84	□□□□□ -0.67
RBM17-212	ENST00000496762	NBPF15	Q8N660	670 aa		10.84	□□□□□ -0.67
RBM17-212	ENST00000496762	CCDC155	Q8N6L0	562 aa		10.84	□□□□□ -0.67
RBM17-212	ENST00000496762	SERPINA10	Q9UK55	444 aa		10.84	□□□□□ -0.67
RBM17-212	ENST00000496762	USP3	Q9Y6I4	520 aa		10.84	□□□□□ -0.67
RBM17-212	ENST00000496762	SIX5	Q8N196	739 aa		10.83	□□□□□ -0.68
RBM17-212	ENST00000496762	CCDC97	Q96F63	343 aa	Predicted RBP	10.83	□□□□□ -0.68
RBM17-212	ENST00000496762	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	10.82	□□□□□ -0.68
RBM17-212	ENST00000496762		A6NJY4	79 aa		10.82	□□□□□ -0.68
RBM17-212	ENST00000496762	SFI1	A8K8P3	1242 aa		10.82	□□□□□ -0.68
RBM17-212	ENST00000496762	PHKA2	P46019	1235 aa		10.82	□□□□□ -0.68
RBM17-212	ENST00000496762	MTFR1	Q15390	333 aa		10.82	□□□□□ -0.68
RBM17-212	ENST00000496762	LCE2A	Q5TA79	106 aa	Predicted RBP	10.82	□□□□□ -0.68
RBM17-212	ENST00000496762	TMEM214	Q6NUQ4	689 aa	Known RBP	10.82	□□□□□ -0.68
RBM17-212	ENST00000496762	LARP1	Q6PKG0	1096 aa	Known RBP	10.82	□□□□□ -0.68
RBM17-212	ENST00000496762	PPARGC1B	Q86YN6	1023 aa	Known RBP	10.82	□□□□□ -0.68
RBM17-212	ENST00000496762	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	10.82	□□□□□ -0.68
RBM17-212	ENST00000496762		H3BM21	787 aa		10.81	□□□□□ -0.68
RBM17-212	ENST00000496762	C4orf17	Q53FE4	359 aa		10.81	□□□□□ -0.68
RBM17-212	ENST00000496762	TAS1R3	Q7RTX0	852 aa		10.81	□□□□□ -0.68
RBM17-212	ENST00000496762	TNS4	Q8IZW8	715 aa		10.81	□□□□□ -0.68
RBM17-212	ENST00000496762	FAM196B	A6NMK8	535 aa		10.8	□□□□□ -0.68
RBM17-212	ENST00000496762	USP17L15	C9J2P7	530 aa		10.8	□□□□□ -0.68
RBM17-212	ENST00000496762	USP17L10	C9JJH3	530 aa		10.8	□□□□□ -0.68
RBM17-212	ENST00000496762	USP17L13	C9JLJ4	530 aa		10.8	□□□□□ -0.68
RBM17-212	ENST00000496762	USP17L12	C9JPN9	530 aa		10.8	□□□□□ -0.68
RBM17-212	ENST00000496762	USP17L11	C9JVI0	530 aa		10.8	□□□□□ -0.68
RBM17-212	ENST00000496762	USP17L21	D6R901	530 aa		10.8	□□□□□ -0.68
RBM17-212	ENST00000496762	USP17L18	D6R9N7	530 aa		10.8	□□□□□ -0.68
RBM17-212	ENST00000496762	USP17L22	D6RA61	530 aa		10.8	□□□□□ -0.68
RBM17-212	ENST00000496762	USP17L17	D6RBQ6	530 aa		10.8	□□□□□ -0.68
RBM17-212	ENST00000496762	USP17L19	D6RCP7	530 aa		10.8	□□□□□ -0.68
RBM17-212	ENST00000496762	USP17L20	D6RJB6	530 aa		10.8	□□□□□ -0.68
RBM17-212	ENST00000496762	BACH1	O14867	736 aa		10.8	□□□□□ -0.68
RBM17-212	ENST00000496762	EPHA4	P54764	986 aa		10.8	□□□□□ -0.68
RBM17-212	ENST00000496762	USP17L24	Q0WX57	530 aa		10.8	□□□□□ -0.68
RBM17-212	ENST00000496762	DPYD	Q12882	1025 aa		10.8	□□□□□ -0.68
RBM17-212	ENST00000496762	ZNF295-AS1	Q8N0V1	137 aa		10.8	□□□□□ -0.68
RBM17-212	ENST00000496762	TREML4	Q6UXN2	200 aa		10.79	□□□□□ -0.68
RBM17-212	ENST00000496762	NPAS3	Q8IXF0	933 aa		10.79	□□□□□ -0.68
RBM17-212	ENST00000496762	TSEN2	Q8NCE0	465 aa	Known RBP	10.79	□□□□□ -0.68
RBM17-212	ENST00000496762	ARX	Q96QS3	562 aa		10.79	□□□□□ -0.68
RBM17-212	ENST00000496762	TBCEL	Q5QJ74	424 aa		10.78	□□□□□ -0.68
RBM17-212	ENST00000496762	CUEDC1	Q9NWM3	386 aa	Predicted RBP	10.78	□□□□□ -0.68
RBM17-212	ENST00000496762	ERBB4	Q15303	1308 aa		10.78	□□□□□ -0.68
RBM17-212	ENST00000496762	CDK2AP1	O14519	115 aa		10.77	□□□□□ -0.68
RBM17-212	ENST00000496762	WFS1	O76024	890 aa		10.77	□□□□□ -0.68
RBM17-212	ENST00000496762	FOXK2	Q01167	660 aa		10.77	□□□□□ -0.68
RBM17-212	ENST00000496762	WDR44	Q5JSH3	913 aa		10.77	□□□□□ -0.68
RBM17-212	ENST00000496762	RHBDD1	Q8TEB9	315 aa		10.77	□□□□□ -0.68
RBM17-212	ENST00000496762	TIMMDC1	Q9NPL8	285 aa		10.77	□□□□□ -0.68
RBM17-212	ENST00000496762	SCHIP1	Q9P0W5	487 aa	Predicted RBP	10.77	□□□□□ -0.68
RBM17-212	ENST00000496762	LGR5	O75473	907 aa		10.77	□□□□□ -0.69
RBM17-212	ENST00000496762	ITGA6	P23229	1130 aa		10.77	□□□□□ -0.69
RBM17-212	ENST00000496762	GNAS	Q5JWF2	1037 aa		10.77	□□□□□ -0.69
RBM17-212	ENST00000496762	ANKMY2	Q8IV38	441 aa		10.77	□□□□□ -0.69
RBM17-212	ENST00000496762	SEC13	P55735	322 aa		10.76	□□□□□ -0.69
RBM17-212	ENST00000496762	GAS2L1	Q99501	681 aa	Predicted RBP	10.76	□□□□□ -0.69
RBM17-212	ENST00000496762	DYRK1B	Q9Y463	629 aa		10.76	□□□□□ -0.69
RBM17-212	ENST00000496762	GTF2E1	P29083	439 aa	Predicted RBP	10.75	□□□□□ -0.69
RBM17-212	ENST00000496762		M0R2N6	131 aa		10.74	□□□□□ -0.69
RBM17-212	ENST00000496762	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	10.74	□□□□□ -0.69
RBM17-212	ENST00000496762	PARP3	Q9Y6F1	533 aa		10.74	□□□□□ -0.69
RBM17-212	ENST00000496762	SHROOM4	Q9ULL8	1493 aa		10.74	□□□□□ -0.69
RBM17-212	ENST00000496762	PLA2G4A	P47712	749 aa		10.73	□□□□□ -0.69
RBM17-212	ENST00000496762	SLC9A9	Q8IVB4	645 aa		10.73	□□□□□ -0.69
RBM17-212	ENST00000496762	GPR161	Q8N6U8	529 aa	Known RBP	10.73	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms