RNA–Protein interactions for RNA: ENST00000496756.2

PHGDH-207, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-207ENST00000496756 SMIM5Q71RC9 77 aa17.9■□□□□ 0.46
PHGDH-207ENST00000496756 LINC00116Q8NCU8 138 aa17.9■□□□□ 0.46
PHGDH-207ENST00000496756 SPG7Q9UQ90 795 aa17.9■□□□□ 0.46
PHGDH-207ENST00000496756 GNPATO15228 680 aa17.89■□□□□ 0.45
PHGDH-207ENST00000496756 MMP10P09238 476 aa17.89■□□□□ 0.45
PHGDH-207ENST00000496756 MAP2P11137 1827 aaKnown RBP17.88■□□□□ 0.45
PHGDH-207ENST00000496756 TMOD3Q9NYL9 352 aa17.88■□□□□ 0.45
PHGDH-207ENST00000496756 BCS1LQ9Y276 419 aa17.88■□□□□ 0.45
PHGDH-207ENST00000496756 PKD1L3Q7Z443 1732 aa17.88■□□□□ 0.45
PHGDH-207ENST00000496756 PXDNLA1KZ92 1463 aa17.88■□□□□ 0.45
PHGDH-207ENST00000496756 KIF13BQ9NQT8 1826 aa17.87■□□□□ 0.45
PHGDH-207ENST00000496756 ATP6V1AP38606 617 aa17.87■□□□□ 0.45
PHGDH-207ENST00000496756 NLGN1Q8N2Q7 840 aa17.87■□□□□ 0.45
PHGDH-207ENST00000496756 ARHGAP27Q6ZUM4 889 aa17.86■□□□□ 0.45
PHGDH-207ENST00000496756 POLR3GLQ9BT43 218 aa17.86■□□□□ 0.45
PHGDH-207ENST00000496756 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.86■□□□□ 0.45
PHGDH-207ENST00000496756 C16orf71Q8IYS4 520 aaPredicted RBP17.85■□□□□ 0.45
PHGDH-207ENST00000496756 RBM46Q8TBY0 533 aaKnown RBP17.85■□□□□ 0.45
PHGDH-207ENST00000496756 A0A0G2JLW4 131 aa17.84■□□□□ 0.45
PHGDH-207ENST00000496756 ITPK1Q13572 414 aa17.84■□□□□ 0.45
PHGDH-207ENST00000496756 TRAPPC3LQ5T215 181 aa17.84■□□□□ 0.45
PHGDH-207ENST00000496756 NMRK2Q9NPI5 230 aa17.84■□□□□ 0.45
PHGDH-207ENST00000496756 ASAP1Q9ULH1 1129 aa17.84■□□□□ 0.45
PHGDH-207ENST00000496756 RTCBQ9Y3I0 505 aaKnown RBP17.84■□□□□ 0.45
PHGDH-207ENST00000496756 NCAPD2Q15021 1401 aa17.83■□□□□ 0.45
PHGDH-207ENST00000496756 PRKRIP1Q9H875 184 aaPredicted RBP17.83■□□□□ 0.44
PHGDH-207ENST00000496756 CCDC87Q9NVE4 849 aa17.83■□□□□ 0.44
PHGDH-207ENST00000496756 N4BP2Q86UW6 1770 aaPredicted RBP17.83■□□□□ 0.44
PHGDH-207ENST00000496756 WDR90Q96KV7 1748 aa17.83■□□□□ 0.44
PHGDH-207ENST00000496756 C10orf71Q711Q0 1435 aa17.82■□□□□ 0.44
PHGDH-207ENST00000496756 PLEKHG2Q9H7P9 1386 aa17.82■□□□□ 0.44
PHGDH-207ENST00000496756 KIF20BQ96Q89 1820 aa17.82■□□□□ 0.44
PHGDH-207ENST00000496756 KIAA1551Q9HCM1 1747 aa17.82■□□□□ 0.44
PHGDH-207ENST00000496756 FCHSD2O94868 740 aa17.82■□□□□ 0.44
PHGDH-207ENST00000496756 ADRA2BP18089 450 aa17.82■□□□□ 0.44
PHGDH-207ENST00000496756 FSTL1Q12841 308 aa17.82■□□□□ 0.44
PHGDH-207ENST00000496756 IFNL2Q8IZJ0 200 aa17.82■□□□□ 0.44
PHGDH-207ENST00000496756 KLRG1Q96E93 195 aa17.82■□□□□ 0.44
PHGDH-207ENST00000496756 JMYQ8N9B5 988 aa17.81■□□□□ 0.44
PHGDH-207ENST00000496756 DPEP1P16444 411 aa17.8■□□□□ 0.44
PHGDH-207ENST00000496756 ATG3Q9NT62 314 aa17.8■□□□□ 0.44
PHGDH-207ENST00000496756 EMILIN1Q9Y6C2 1016 aa17.8■□□□□ 0.44
PHGDH-207ENST00000496756 PARP3Q9Y6F1 533 aa17.8■□□□□ 0.44
PHGDH-207ENST00000496756 KDM2BQ8NHM5 1336 aa17.79■□□□□ 0.44
PHGDH-207ENST00000496756 PPM1GO15355 546 aaPredicted RBP17.79■□□□□ 0.44
PHGDH-207ENST00000496756 PHKG2P15735 406 aa17.79■□□□□ 0.44
PHGDH-207ENST00000496756 RALBP1Q15311 655 aa17.79■□□□□ 0.44
PHGDH-207ENST00000496756 RC3H1Q5TC82 1133 aaKnown RBP17.79■□□□□ 0.44
PHGDH-207ENST00000496756 C9orf131Q5VYM1 1079 aa17.79■□□□□ 0.44
PHGDH-207ENST00000496756 RFC4P35249 363 aa17.78■□□□□ 0.44
PHGDH-207ENST00000496756 COL13A1Q5TAT6 717 aaPredicted RBP17.77■□□□□ 0.44
PHGDH-207ENST00000496756 ARHGEF1Q92888 912 aaKnown RBP17.77■□□□□ 0.44
PHGDH-207ENST00000496756 EYA1Q99502 592 aa17.77■□□□□ 0.44
PHGDH-207ENST00000496756 PIM2Q9P1W9 311 aa17.77■□□□□ 0.44
PHGDH-207ENST00000496756 C4AP0C0L4 1744 aa17.77■□□□□ 0.44
PHGDH-207ENST00000496756 BRCA1P38398 1863 aaKnown RBP17.77■□□□□ 0.43
PHGDH-207ENST00000496756 KDRP35968 1356 aa17.77■□□□□ 0.43
PHGDH-207ENST00000496756 ZNF831Q5JPB2 1677 aa17.77■□□□□ 0.43
PHGDH-207ENST00000496756 GYS1P13807 737 aa17.76■□□□□ 0.43
PHGDH-207ENST00000496756 ARFGEF1Q9Y6D6 1849 aa17.76■□□□□ 0.43
PHGDH-207ENST00000496756 CNTNAP4Q9C0A0 1308 aa17.75■□□□□ 0.43
PHGDH-207ENST00000496756 ERVV-2B6SEH9 535 aa17.75■□□□□ 0.43
PHGDH-207ENST00000496756 RPS6KA4O75676 772 aa17.75■□□□□ 0.43
PHGDH-207ENST00000496756 RBM42Q9BTD8 480 aaKnown RBP17.75■□□□□ 0.43
PHGDH-207ENST00000496756 PCNTO95613 3336 aa17.75■□□□□ 0.43
PHGDH-207ENST00000496756 KCNA3P22001 575 aa17.74■□□□□ 0.43
PHGDH-207ENST00000496756 HTRA3P83110 453 aa17.74■□□□□ 0.43
PHGDH-207ENST00000496756 DALRD3Q5D0E6 543 aaKnown RBP17.74■□□□□ 0.43
PHGDH-207ENST00000496756 DCAF5Q96JK2 942 aa17.74■□□□□ 0.43
PHGDH-207ENST00000496756 YTHDC1Q96MU7 727 aaKnown RBP17.74■□□□□ 0.43
PHGDH-207ENST00000496756 ANKRD26Q9UPS8 1709 aa17.74■□□□□ 0.43
PHGDH-207ENST00000496756 HSP90AB1P08238 724 aaKnown RBP17.73■□□□□ 0.43
PHGDH-207ENST00000496756 TNS4Q8IZW8 715 aa17.73■□□□□ 0.43
PHGDH-207ENST00000496756 RNF181Q9P0P0 153 aa17.73■□□□□ 0.43
PHGDH-207ENST00000496756 KCPQ6ZWJ8 1503 aa17.72■□□□□ 0.43
PHGDH-207ENST00000496756 SMC1BQ8NDV3 1235 aa17.72■□□□□ 0.43
PHGDH-207ENST00000496756 SLC4A9Q96Q91 983 aa17.72■□□□□ 0.43
PHGDH-207ENST00000496756 CARD14Q9BXL6 1004 aa17.72■□□□□ 0.43
PHGDH-207ENST00000496756 NPC1L1Q9UHC9 1359 aa17.71■□□□□ 0.43
PHGDH-207ENST00000496756 PER1O15534 1290 aaPredicted RBP17.71■□□□□ 0.43
PHGDH-207ENST00000496756 CAPN15O75808 1086 aa17.71■□□□□ 0.43
PHGDH-207ENST00000496756 PANK3Q9H999 370 aa17.71■□□□□ 0.43
PHGDH-207ENST00000496756 RRAGCQ9HB90 399 aa17.71■□□□□ 0.43
PHGDH-207ENST00000496756 KNSTRNQ9Y448 316 aa17.71■□□□□ 0.43
PHGDH-207ENST00000496756 COL5A3P25940 1745 aaPredicted RBP17.71■□□□□ 0.43
PHGDH-207ENST00000496756 TNRC6CQ9HCJ0 1690 aaKnown RBP17.71■□□□□ 0.42
PHGDH-207ENST00000496756 PRELPP51888 382 aa17.7■□□□□ 0.42
PHGDH-207ENST00000496756 ZC3H4Q9UPT8 1303 aaKnown RBP17.7■□□□□ 0.42
PHGDH-207ENST00000496756 MYBBP1AQ9BQG0 1328 aaKnown RBP17.69■□□□□ 0.42
PHGDH-207ENST00000496756 POLKQ9UBT6 870 aa17.68■□□□□ 0.42
PHGDH-207ENST00000496756 CABP4P57796 275 aa17.67■□□□□ 0.42
PHGDH-207ENST00000496756 MRS2Q9HD23 443 aa17.67■□□□□ 0.42
PHGDH-207ENST00000496756 MYH14Q7Z406 1995 aaKnown RBP17.66■□□□□ 0.42
PHGDH-207ENST00000496756 EIF4A2Q14240 407 aaKnown RBP17.66■□□□□ 0.42
PHGDH-207ENST00000496756 PLEKHO1Q53GL0 409 aaPredicted RBP17.66■□□□□ 0.42
PHGDH-207ENST00000496756 SBF1O95248 1867 aa17.66■□□□□ 0.42
PHGDH-207ENST00000496756 USP42Q9H9J4 1324 aaKnown RBP17.66■□□□□ 0.42
PHGDH-207ENST00000496756 CRKLP46109 303 aaKnown RBP17.65■□□□□ 0.42
PHGDH-207ENST00000496756 FKBP8Q14318 412 aa17.65■□□□□ 0.42
PHGDH-207ENST00000496756 AMOTQ4VCS5 1084 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms