RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 DISP2A7MBM2 1401 aa21.68■■□□□ 1.06
LMNA-216ENST00000496738 MEX3CQ5U5Q3 659 aaKnown RBP21.67■■□□□ 1.06
LMNA-216ENST00000496738 CLUAP1Q96AJ1 413 aa21.67■■□□□ 1.06
LMNA-216ENST00000496738 KDM3BQ7LBC6 1761 aa21.67■■□□□ 1.06
LMNA-216ENST00000496738 ALDH1L2Q3SY69 923 aa21.67■■□□□ 1.06
LMNA-216ENST00000496738 PANK1Q8TE04 598 aa21.67■■□□□ 1.06
LMNA-216ENST00000496738 NOB1Q9ULX3 412 aaKnown RBP21.67■■□□□ 1.06
LMNA-216ENST00000496738 SIPA1L3O60292 1781 aaPredicted RBP21.67■■□□□ 1.06
LMNA-216ENST00000496738 NFATC2IPQ8NCF5 419 aa21.66■■□□□ 1.06
LMNA-216ENST00000496738 WNK3Q9BYP7 1800 aa21.66■■□□□ 1.06
LMNA-216ENST00000496738 ERICH6BQ5W0A0 696 aa21.66■■□□□ 1.06
LMNA-216ENST00000496738 UNC5CLQ8IV45 518 aa21.66■■□□□ 1.06
LMNA-216ENST00000496738 SLC52A2Q9HAB3 445 aa21.66■■□□□ 1.06
LMNA-216ENST00000496738 BABAM1Q9NWV8 329 aa21.66■■□□□ 1.06
LMNA-216ENST00000496738 BCL9LQ86UU0 1499 aa21.65■■□□□ 1.06
LMNA-216ENST00000496738 HSP90AB1P08238 724 aaKnown RBP21.65■■□□□ 1.06
LMNA-216ENST00000496738 SPATA31A5Q5VU36 1347 aa21.65■■□□□ 1.06
LMNA-216ENST00000496738 SPATA31A7Q8IWB4 1347 aa21.65■■□□□ 1.06
LMNA-216ENST00000496738 MRPL50Q8N5N7 158 aaKnown RBP21.65■■□□□ 1.06
LMNA-216ENST00000496738 NECTIN2Q92692 538 aa21.65■■□□□ 1.06
LMNA-216ENST00000496738 ZNF428Q96B54 188 aa21.65■■□□□ 1.06
LMNA-216ENST00000496738 ZKSCAN2Q63HK3 967 aa21.64■■□□□ 1.05
LMNA-216ENST00000496738 PPP4R2Q9NY27 417 aa21.64■■□□□ 1.05
LMNA-216ENST00000496738 SLC39A6Q13433 755 aa21.64■■□□□ 1.05
LMNA-216ENST00000496738 B4GALNT3Q6L9W6 998 aa21.63■■□□□ 1.05
LMNA-216ENST00000496738 RLBP1P12271 317 aa21.63■■□□□ 1.05
LMNA-216ENST00000496738 CABP4P57796 275 aa21.63■■□□□ 1.05
LMNA-216ENST00000496738 EIF4A1P60842 406 aaKnown RBP21.63■■□□□ 1.05
LMNA-216ENST00000496738 TSHZ2Q9NRE2 1034 aa21.62■■□□□ 1.05
LMNA-216ENST00000496738 USP21Q9UK80 565 aa21.62■■□□□ 1.05
LMNA-216ENST00000496738 KIF16BQ96L93 1317 aa21.62■■□□□ 1.05
LMNA-216ENST00000496738 COG6Q9Y2V7 657 aa21.61■■□□□ 1.05
LMNA-216ENST00000496738 MRC1P22897 1456 aa21.61■■□□□ 1.05
LMNA-216ENST00000496738 TRIM27P14373 513 aa21.61■■□□□ 1.05
LMNA-216ENST00000496738 EXOC5O00471 708 aa21.6■■□□□ 1.05
LMNA-216ENST00000496738 FNBP4Q8N3X1 1017 aaPredicted RBP21.6■■□□□ 1.05
LMNA-216ENST00000496738 PDE3AQ14432 1141 aa21.6■■□□□ 1.05
LMNA-216ENST00000496738 THRAP3Q9Y2W1 955 aaKnown RBP21.6■■□□□ 1.05
LMNA-216ENST00000496738 NKX1-1Q15270 411 aaPredicted RBP21.59■■□□□ 1.05
LMNA-216ENST00000496738 ATF7IPQ6VMQ6 1270 aa21.59■■□□□ 1.05
LMNA-216ENST00000496738 FTSJ3Q8IY81 847 aaKnown RBP21.59■■□□□ 1.05
LMNA-216ENST00000496738 TOGARAM1Q9Y4F4 1720 aa21.58■■□□□ 1.05
LMNA-216ENST00000496738 VPS72Q15906 364 aa21.58■■□□□ 1.05
LMNA-216ENST00000496738 FAM98CQ17RN3 349 aaKnown RBP21.58■■□□□ 1.05
LMNA-216ENST00000496738 TNS2Q63HR2 1409 aa21.58■■□□□ 1.04
LMNA-216ENST00000496738 ZNF790Q6PG37 636 aa21.58■■□□□ 1.04
LMNA-216ENST00000496738 DZIP1LQ8IYY4 767 aaKnown RBP21.58■■□□□ 1.04
LMNA-216ENST00000496738 PRAMEF22A3QJZ6 481 aa21.57■■□□□ 1.04
LMNA-216ENST00000496738 EIF2S2P20042 333 aaKnown RBP21.57■■□□□ 1.04
LMNA-216ENST00000496738 AFF2P51816 1311 aa21.57■■□□□ 1.04
LMNA-216ENST00000496738 IPO8O15397 1037 aaKnown RBP21.57■■□□□ 1.04
LMNA-216ENST00000496738 SLC4A2P04920 1241 aa21.57■■□□□ 1.04
LMNA-216ENST00000496738 DDB1Q16531 1140 aa21.57■■□□□ 1.04
LMNA-216ENST00000496738 HDGFL1Q5TGJ6 251 aa21.56■■□□□ 1.04
LMNA-216ENST00000496738 BRPF1P55201 1214 aaPredicted RBP21.56■■□□□ 1.04
LMNA-216ENST00000496738 CDCA7Q9BWT1 371 aaPredicted RBP21.56■■□□□ 1.04
LMNA-216ENST00000496738 BARGINQ6ZT62 677 aa21.55■■□□□ 1.04
LMNA-216ENST00000496738 CCDC136Q96JN2 1154 aa21.55■■□□□ 1.04
LMNA-216ENST00000496738 ERVV-2B6SEH9 535 aa21.55■■□□□ 1.04
LMNA-216ENST00000496738 TTC5Q8N0Z6 440 aa21.55■■□□□ 1.04
LMNA-216ENST00000496738 A0A0G2JS52 829 aa21.54■■□□□ 1.04
LMNA-216ENST00000496738 CCDC30Q5VVM6 783 aa21.54■■□□□ 1.04
LMNA-216ENST00000496738 STK31Q9BXU1 1019 aa21.54■■□□□ 1.04
LMNA-216ENST00000496738 G2E3Q7L622 706 aa21.54■■□□□ 1.04
LMNA-216ENST00000496738 ZNF496Q96IT1 587 aaPredicted RBP21.53■■□□□ 1.04
LMNA-216ENST00000496738 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.53■■□□□ 1.04
LMNA-216ENST00000496738 GIGYF1O75420 1035 aaPredicted RBP21.53■■□□□ 1.04
LMNA-216ENST00000496738 TMEM57Q8N5G2 664 aa21.53■■□□□ 1.04
LMNA-216ENST00000496738 ITPRIPQ8IWB1 547 aa21.52■■□□□ 1.04
LMNA-216ENST00000496738 ANO8Q9HCE9 1232 aaPredicted RBP21.51■■□□□ 1.03
LMNA-216ENST00000496738 TMOD3Q9NYL9 352 aa21.51■■□□□ 1.03
LMNA-216ENST00000496738 HEG1Q9ULI3 1381 aa21.51■■□□□ 1.03
LMNA-216ENST00000496738 MVPQ14764 893 aaKnown RBP21.51■■□□□ 1.03
LMNA-216ENST00000496738 C5P01031 1676 aa21.51■■□□□ 1.03
LMNA-216ENST00000496738 SOS1Q07889 1333 aaPredicted RBP21.51■■□□□ 1.03
LMNA-216ENST00000496738 MS4A1P11836 297 aa21.5■■□□□ 1.03
LMNA-216ENST00000496738 MARCH10Q8NA82 808 aaPredicted RBP21.5■■□□□ 1.03
LMNA-216ENST00000496738 SYTL4Q96C24 671 aaPredicted RBP21.5■■□□□ 1.03
LMNA-216ENST00000496738 ARHGAP45Q92619 1136 aa21.5■■□□□ 1.03
LMNA-216ENST00000496738 CHPF2Q9P2E5 772 aa21.5■■□□□ 1.03
LMNA-216ENST00000496738 ANXA1P04083 346 aa21.49■■□□□ 1.03
LMNA-216ENST00000496738 HOXB7P09629 217 aa21.49■■□□□ 1.03
LMNA-216ENST00000496738 UBE2Q2Q8WVN8 375 aa21.48■■□□□ 1.03
LMNA-216ENST00000496738 PIGBQ92521 554 aa21.48■■□□□ 1.03
LMNA-216ENST00000496738 API5Q9BZZ5 524 aaKnown RBP21.48■■□□□ 1.03
LMNA-216ENST00000496738 DOT1LQ8TEK3 1739 aa21.48■■□□□ 1.03
LMNA-216ENST00000496738 FMNL2Q96PY5 1086 aa21.48■■□□□ 1.03
LMNA-216ENST00000496738 ITGB4P16144 1822 aa21.48■■□□□ 1.03
LMNA-216ENST00000496738 GLI3P10071 1580 aa21.48■■□□□ 1.03
LMNA-216ENST00000496738 RGS12O14924 1447 aa21.48■■□□□ 1.03
LMNA-216ENST00000496738 PTCD1O75127 700 aaKnown RBP21.47■■□□□ 1.03
LMNA-216ENST00000496738 PHAXQ9H814 394 aaKnown RBP21.47■■□□□ 1.03
LMNA-216ENST00000496738 PAPPAQ13219 1627 aa21.47■■□□□ 1.03
LMNA-216ENST00000496738 ACSBG1Q96GR2 724 aa21.47■■□□□ 1.03
LMNA-216ENST00000496738 ABCC4O15439 1325 aa21.47■■□□□ 1.03
LMNA-216ENST00000496738 FLIIQ13045 1269 aa21.46■■□□□ 1.03
LMNA-216ENST00000496738 GJD4Q96KN9 370 aaPredicted RBP21.46■■□□□ 1.03
LMNA-216ENST00000496738 F6X3S4 739 aa21.45■■□□□ 1.02
LMNA-216ENST00000496738 PTPRCP08575 1304 aa21.45■■□□□ 1.02
LMNA-216ENST00000496738 PRIM1P49642 420 aaKnown RBP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms