RNA–Protein interactions for RNA: ENST00000496677.5

CLDN12-213, Transcript of claudin 12, humanhuman

TSL 1 (best)

Gene CLDN12, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-213ENST00000496677 C4BP0C0L5 1744 aa16.79■□□□□ 0.28
CLDN12-213ENST00000496677 SLC4A9Q96Q91 983 aa16.79■□□□□ 0.28
CLDN12-213ENST00000496677 DIAPH1O60610 1272 aaKnown RBP16.78■□□□□ 0.28
CLDN12-213ENST00000496677 FLAD1Q8NFF5 587 aa16.78■□□□□ 0.28
CLDN12-213ENST00000496677 COL3A1P02461 1466 aaPredicted RBP16.78■□□□□ 0.28
CLDN12-213ENST00000496677 HMOX1P09601 288 aa16.76■□□□□ 0.27
CLDN12-213ENST00000496677 POLD1P28340 1107 aa16.76■□□□□ 0.27
CLDN12-213ENST00000496677 C1orf141Q5JVX7 400 aa16.76■□□□□ 0.27
CLDN12-213ENST00000496677 SMIM5Q71RC9 77 aa16.76■□□□□ 0.27
CLDN12-213ENST00000496677 UBR3Q6ZT12 1888 aa16.76■□□□□ 0.27
CLDN12-213ENST00000496677 ATP6V1AP38606 617 aa16.75■□□□□ 0.27
CLDN12-213ENST00000496677 CABP4P57796 275 aa16.75■□□□□ 0.27
CLDN12-213ENST00000496677 AKAP4Q5JQC9 854 aa16.75■□□□□ 0.27
CLDN12-213ENST00000496677 NFATC2IPQ8NCF5 419 aa16.75■□□□□ 0.27
CLDN12-213ENST00000496677 AK7Q96M32 723 aa16.75■□□□□ 0.27
CLDN12-213ENST00000496677 ZNF831Q5JPB2 1677 aa16.75■□□□□ 0.27
CLDN12-213ENST00000496677 LGR6Q9HBX8 967 aa16.74■□□□□ 0.27
CLDN12-213ENST00000496677 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.73■□□□□ 0.27
CLDN12-213ENST00000496677 SSFA2P28290 1259 aa16.73■□□□□ 0.27
CLDN12-213ENST00000496677 MTHFSDQ2M296 383 aaKnown RBP16.73■□□□□ 0.27
CLDN12-213ENST00000496677 MSL1Q68DK7 614 aa16.73■□□□□ 0.27
CLDN12-213ENST00000496677 SCN11AQ9UI33 1791 aa16.72■□□□□ 0.27
CLDN12-213ENST00000496677 DCAF8L1A6NGE4 600 aa16.72■□□□□ 0.27
CLDN12-213ENST00000496677 CNGB1Q14028 1251 aaPredicted RBP16.72■□□□□ 0.27
CLDN12-213ENST00000496677 RC3H1Q5TC82 1133 aaKnown RBP16.72■□□□□ 0.27
CLDN12-213ENST00000496677 CNKSR2Q8WXI2 1034 aa16.72■□□□□ 0.27
CLDN12-213ENST00000496677 ADAMTS7Q9UKP4 1686 aa16.7■□□□□ 0.26
CLDN12-213ENST00000496677 RNMTO43148 476 aaKnown RBP16.7■□□□□ 0.26
CLDN12-213ENST00000496677 PHF14O94880 888 aa16.7■□□□□ 0.26
CLDN12-213ENST00000496677 NLGN2Q8NFZ4 835 aa16.7■□□□□ 0.26
CLDN12-213ENST00000496677 RBM42Q9BTD8 480 aaKnown RBP16.7■□□□□ 0.26
CLDN12-213ENST00000496677 SLC52A2Q9HAB3 445 aa16.7■□□□□ 0.26
CLDN12-213ENST00000496677 GNPATO15228 680 aa16.69■□□□□ 0.26
CLDN12-213ENST00000496677 YY1P25490 414 aa16.69■□□□□ 0.26
CLDN12-213ENST00000496677 PPP2R1AP30153 589 aa16.69■□□□□ 0.26
CLDN12-213ENST00000496677 CNTNAP4Q9C0A0 1308 aa16.69■□□□□ 0.26
CLDN12-213ENST00000496677 MRC1P22897 1456 aa16.68■□□□□ 0.26
CLDN12-213ENST00000496677 PTCD1O75127 700 aaKnown RBP16.68■□□□□ 0.26
CLDN12-213ENST00000496677 COL5A3P25940 1745 aaPredicted RBP16.67■□□□□ 0.26
CLDN12-213ENST00000496677 U2SURPO15042 1029 aaKnown RBP16.67■□□□□ 0.26
CLDN12-213ENST00000496677 RPS6KA4O75676 772 aa16.67■□□□□ 0.26
CLDN12-213ENST00000496677 MYH14Q7Z406 1995 aaKnown RBP16.67■□□□□ 0.26
CLDN12-213ENST00000496677 CD2APQ9Y5K6 639 aa16.66■□□□□ 0.26
CLDN12-213ENST00000496677 CICQ96RK0 1608 aaPredicted RBP16.66■□□□□ 0.26
CLDN12-213ENST00000496677 TRAPPC3LQ5T215 181 aa16.65■□□□□ 0.26
CLDN12-213ENST00000496677 KLHL34Q8N239 644 aa16.65■□□□□ 0.26
CLDN12-213ENST00000496677 IL17REQ8NFR9 667 aa16.65■□□□□ 0.26
CLDN12-213ENST00000496677 ARHGEF1Q92888 912 aaKnown RBP16.65■□□□□ 0.26
CLDN12-213ENST00000496677 PHACTR3Q96KR7 559 aa16.65■□□□□ 0.26
CLDN12-213ENST00000496677 RSPH6AQ9H0K4 717 aa16.65■□□□□ 0.26
CLDN12-213ENST00000496677 RTCBQ9Y3I0 505 aaKnown RBP16.65■□□□□ 0.26
CLDN12-213ENST00000496677 UTRNP46939 3433 aa16.65■□□□□ 0.26
CLDN12-213ENST00000496677 INTS5Q6P9B9 1019 aaKnown RBP16.64■□□□□ 0.25
CLDN12-213ENST00000496677 CFAP53Q96M91 514 aa16.64■□□□□ 0.25
CLDN12-213ENST00000496677 TJP1Q07157 1748 aa16.64■□□□□ 0.25
CLDN12-213ENST00000496677 CRKLP46109 303 aaKnown RBP16.63■□□□□ 0.25
CLDN12-213ENST00000496677 SLC39A6Q13433 755 aa16.63■□□□□ 0.25
CLDN12-213ENST00000496677 GPR162Q16538 588 aa16.63■□□□□ 0.25
CLDN12-213ENST00000496677 VIRMAQ69YN4 1812 aaKnown RBP16.63■□□□□ 0.25
CLDN12-213ENST00000496677 KCPQ6ZWJ8 1503 aa16.62■□□□□ 0.25
CLDN12-213ENST00000496677 DNAJC10Q8IXB1 793 aa16.62■□□□□ 0.25
CLDN12-213ENST00000496677 GAS2L2Q8NHY3 880 aa16.62■□□□□ 0.25
CLDN12-213ENST00000496677 GNAT3A8MTJ3 354 aa16.61■□□□□ 0.25
CLDN12-213ENST00000496677 GYS1P13807 737 aa16.61■□□□□ 0.25
CLDN12-213ENST00000496677 YBX3P16989 372 aaKnown RBP eCLIP16.61■□□□□ 0.25
CLDN12-213ENST00000496677 PRKAR2BP31323 418 aa16.61■□□□□ 0.25
CLDN12-213ENST00000496677 FCHSD2O94868 740 aa16.6■□□□□ 0.25
CLDN12-213ENST00000496677 MMP10P09238 476 aa16.6■□□□□ 0.25
CLDN12-213ENST00000496677 CYP19A1P11511 503 aaPredicted RBP16.6■□□□□ 0.25
CLDN12-213ENST00000496677 VSIG10Q8N0Z9 540 aa16.6■□□□□ 0.25
CLDN12-213ENST00000496677 NLGN1Q8N2Q7 840 aa16.6■□□□□ 0.25
CLDN12-213ENST00000496677 NUDCQ9Y266 331 aa16.6■□□□□ 0.25
CLDN12-213ENST00000496677 CEMIPQ8WUJ3 1361 aa16.6■□□□□ 0.25
CLDN12-213ENST00000496677 RFC4P35249 363 aa16.59■□□□□ 0.25
CLDN12-213ENST00000496677 NCBP3Q53F19 620 aaKnown RBP16.59■□□□□ 0.25
CLDN12-213ENST00000496677 GOLGB1Q14789 3259 aaKnown RBP16.58■□□□□ 0.24
CLDN12-213ENST00000496677 U2AF1L5P0DN76 240 aaPredicted RBP16.58■□□□□ 0.24
CLDN12-213ENST00000496677 U2AF1Q01081 240 aaKnown RBP eCLIP16.58■□□□□ 0.24
CLDN12-213ENST00000496677 CHD4Q14839 1912 aa16.58■□□□□ 0.24
CLDN12-213ENST00000496677 UBR2Q8IWV8 1755 aa16.57■□□□□ 0.24
CLDN12-213ENST00000496677 C4AP0C0L4 1744 aa16.57■□□□□ 0.24
CLDN12-213ENST00000496677 CCDC87Q9NVE4 849 aa16.57■□□□□ 0.24
CLDN12-213ENST00000496677 SIPA1L3O60292 1781 aaPredicted RBP16.56■□□□□ 0.24
CLDN12-213ENST00000496677 SOS1Q07889 1333 aaPredicted RBP16.56■□□□□ 0.24
CLDN12-213ENST00000496677 USP42Q9H9J4 1324 aaKnown RBP16.56■□□□□ 0.24
CLDN12-213ENST00000496677 PELP1Q8IZL8 1130 aaKnown RBP16.56■□□□□ 0.24
CLDN12-213ENST00000496677 SRP68Q9UHB9 627 aaKnown RBP16.56■□□□□ 0.24
CLDN12-213ENST00000496677 GRIN3BO60391 1043 aa16.55■□□□□ 0.24
CLDN12-213ENST00000496677 TEFQ10587 303 aa16.55■□□□□ 0.24
CLDN12-213ENST00000496677 FKBP8Q14318 412 aa16.55■□□□□ 0.24
CLDN12-213ENST00000496677 ZNF790Q6PG37 636 aa16.55■□□□□ 0.24
CLDN12-213ENST00000496677 ZNF784Q8NCA9 323 aaPredicted RBP16.55■□□□□ 0.24
CLDN12-213ENST00000496677 ZNF496Q96IT1 587 aaPredicted RBP16.55■□□□□ 0.24
CLDN12-213ENST00000496677 TM4SF1P30408 202 aa16.54■□□□□ 0.24
CLDN12-213ENST00000496677 HOXD11P31277 338 aaPredicted RBP16.54■□□□□ 0.24
CLDN12-213ENST00000496677 KIF13BQ9NQT8 1826 aa16.54■□□□□ 0.24
CLDN12-213ENST00000496677 RNF216Q9NWF9 866 aaPredicted RBP16.53■□□□□ 0.24
CLDN12-213ENST00000496677 ZBTB1Q9Y2K1 713 aa16.53■□□□□ 0.24
CLDN12-213ENST00000496677 C10orf71Q711Q0 1435 aa16.53■□□□□ 0.24
CLDN12-213ENST00000496677 HEG1Q9ULI3 1381 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms