RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 TMC1Q8TDI8 760 aa16.67■□□□□ 0.26
ATG3-209ENST00000496423 TERF2IPQ9NYB0 399 aa16.67■□□□□ 0.26
ATG3-209ENST00000496423 TOGARAM1Q9Y4F4 1720 aa16.67■□□□□ 0.26
ATG3-209ENST00000496423 MEGF6O75095 1541 aa16.66■□□□□ 0.26
ATG3-209ENST00000496423 HOXC9P31274 260 aa16.66■□□□□ 0.26
ATG3-209ENST00000496423 CTCFP49711 727 aaPredicted RBP16.66■□□□□ 0.26
ATG3-209ENST00000496423 SMIM5Q71RC9 77 aa16.66■□□□□ 0.26
ATG3-209ENST00000496423 KIAA1551Q9HCM1 1747 aa16.66■□□□□ 0.26
ATG3-209ENST00000496423 EDC4Q6P2E9 1401 aaKnown RBP16.65■□□□□ 0.26
ATG3-209ENST00000496423 LOC102724428A0A0B4J2F2 783 aa16.65■□□□□ 0.26
ATG3-209ENST00000496423 SIK1P57059 783 aa16.65■□□□□ 0.26
ATG3-209ENST00000496423 DCAF5Q96JK2 942 aa16.65■□□□□ 0.26
ATG3-209ENST00000496423 RTCBQ9Y3I0 505 aaKnown RBP16.65■□□□□ 0.26
ATG3-209ENST00000496423 SBNO2Q9Y2G9 1366 aa16.64■□□□□ 0.26
ATG3-209ENST00000496423 SMG6Q86US8 1419 aaKnown RBP16.64■□□□□ 0.25
ATG3-209ENST00000496423 MLLT1Q03111 559 aaPredicted RBP16.64■□□□□ 0.25
ATG3-209ENST00000496423 COG3Q96JB2 828 aa16.64■□□□□ 0.25
ATG3-209ENST00000496423 BRCA1P38398 1863 aaKnown RBP16.64■□□□□ 0.25
ATG3-209ENST00000496423 RGPD2P0DJD1 1756 aa16.64■□□□□ 0.25
ATG3-209ENST00000496423 GLTPD2A6NH11 291 aa16.63■□□□□ 0.25
ATG3-209ENST00000496423 ZBTB22O15209 634 aa16.63■□□□□ 0.25
ATG3-209ENST00000496423 FOXN1O15353 648 aa16.63■□□□□ 0.25
ATG3-209ENST00000496423 ATP6V1AP38606 617 aa16.63■□□□□ 0.25
ATG3-209ENST00000496423 LINC00116Q8NCU8 138 aa16.63■□□□□ 0.25
ATG3-209ENST00000496423 CREBZFQ9NS37 354 aa16.63■□□□□ 0.25
ATG3-209ENST00000496423 ITGB4P16144 1822 aa16.63■□□□□ 0.25
ATG3-209ENST00000496423 NBPF6Q5VWK0 638 aa16.62■□□□□ 0.25
ATG3-209ENST00000496423 NBPF4Q96M43 638 aa16.62■□□□□ 0.25
ATG3-209ENST00000496423 SBF1O95248 1867 aa16.62■□□□□ 0.25
ATG3-209ENST00000496423 KCNA3P22001 575 aa16.61■□□□□ 0.25
ATG3-209ENST00000496423 RFC4P35249 363 aa16.61■□□□□ 0.25
ATG3-209ENST00000496423 DPY19L2Q6NUT2 758 aa16.61■□□□□ 0.25
ATG3-209ENST00000496423 PIGBQ92521 554 aa16.61■□□□□ 0.25
ATG3-209ENST00000496423 MKRN1Q9UHC7 482 aaKnown RBP16.61■□□□□ 0.25
ATG3-209ENST00000496423 MAP3K19Q56UN5 1328 aa16.61■□□□□ 0.25
ATG3-209ENST00000496423 CD163L1Q9NR16 1453 aa16.61■□□□□ 0.25
ATG3-209ENST00000496423 C4AP0C0L4 1744 aa16.59■□□□□ 0.25
ATG3-209ENST00000496423 LMNB1P20700 586 aa16.59■□□□□ 0.25
ATG3-209ENST00000496423 ABHD8Q96I13 439 aa16.59■□□□□ 0.25
ATG3-209ENST00000496423 TMOD3Q9NYL9 352 aa16.59■□□□□ 0.25
ATG3-209ENST00000496423 USHBP1Q8N6Y0 703 aa16.58■□□□□ 0.24
ATG3-209ENST00000496423 RTL1A6NKG5 1358 aa16.58■□□□□ 0.24
ATG3-209ENST00000496423 SLC12A5Q9H2X9 1139 aa16.57■□□□□ 0.24
ATG3-209ENST00000496423 ROCK2O75116 1388 aaKnown RBP16.56■□□□□ 0.24
ATG3-209ENST00000496423 CYP27B1O15528 508 aa16.56■□□□□ 0.24
ATG3-209ENST00000496423 ARHGEF1Q92888 912 aaKnown RBP16.56■□□□□ 0.24
ATG3-209ENST00000496423 SPG7Q9UQ90 795 aa16.56■□□□□ 0.24
ATG3-209ENST00000496423 MAP2P11137 1827 aaKnown RBP16.56■□□□□ 0.24
ATG3-209ENST00000496423 GYS1P13807 737 aa16.55■□□□□ 0.24
ATG3-209ENST00000496423 ITPK1Q13572 414 aa16.55■□□□□ 0.24
ATG3-209ENST00000496423 RC3H1Q5TC82 1133 aaKnown RBP16.55■□□□□ 0.24
ATG3-209ENST00000496423 CHADLQ6NUI6 762 aa16.55■□□□□ 0.24
ATG3-209ENST00000496423 LBX1P52954 281 aa16.54■□□□□ 0.24
ATG3-209ENST00000496423 NKX1-1Q15270 411 aaPredicted RBP16.54■□□□□ 0.24
ATG3-209ENST00000496423 CCDC85CA6NKD9 419 aa16.53■□□□□ 0.24
ATG3-209ENST00000496423 RGS19P49795 217 aa16.53■□□□□ 0.24
ATG3-209ENST00000496423 CNTNAP1P78357 1384 aa16.52■□□□□ 0.24
ATG3-209ENST00000496423 RPS6KA4O75676 772 aa16.52■□□□□ 0.24
ATG3-209ENST00000496423 ASAP1Q9ULH1 1129 aa16.52■□□□□ 0.24
ATG3-209ENST00000496423 A0A1W2PP64 1363 aa16.51■□□□□ 0.23
ATG3-209ENST00000496423 CHRNA5P30532 468 aa16.5■□□□□ 0.23
ATG3-209ENST00000496423 RASSF7Q02833 373 aa16.5■□□□□ 0.23
ATG3-209ENST00000496423 PUS7Q96PZ0 661 aaKnown RBP16.5■□□□□ 0.23
ATG3-209ENST00000496423 WBP1LQ9NX94 342 aa16.5■□□□□ 0.23
ATG3-209ENST00000496423 KDM6AO15550 1401 aaPredicted RBP16.5■□□□□ 0.23
ATG3-209ENST00000496423 FBLN1P23142 703 aa16.49■□□□□ 0.23
ATG3-209ENST00000496423 MAP2K1Q02750 393 aaPredicted RBP16.49■□□□□ 0.23
ATG3-209ENST00000496423 RRS1Q15050 365 aaKnown RBP16.49■□□□□ 0.23
ATG3-209ENST00000496423 RBM42Q9BTD8 480 aaKnown RBP16.49■□□□□ 0.23
ATG3-209ENST00000496423 CCDC88AQ3V6T2 1871 aa16.48■□□□□ 0.23
ATG3-209ENST00000496423 ATG3Q9NT62 314 aa16.48■□□□□ 0.23
ATG3-209ENST00000496423 INSRP06213 1382 aa16.48■□□□□ 0.23
ATG3-209ENST00000496423 CNTNAP4Q9C0A0 1308 aa16.47■□□□□ 0.23
ATG3-209ENST00000496423 VEGFBP49765 207 aa16.47■□□□□ 0.23
ATG3-209ENST00000496423 IFNL2Q8IZJ0 200 aa16.47■□□□□ 0.23
ATG3-209ENST00000496423 L3MBTL2Q969R5 705 aa16.47■□□□□ 0.23
ATG3-209ENST00000496423 TMEM88BA6NKF7 163 aa16.46■□□□□ 0.23
ATG3-209ENST00000496423 POTECB2RU33 542 aa16.46■□□□□ 0.23
ATG3-209ENST00000496423 TTLL6Q8N841 843 aa16.46■□□□□ 0.23
ATG3-209ENST00000496423 BEGAINQ9BUH8 593 aa16.46■□□□□ 0.23
ATG3-209ENST00000496423 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.46■□□□□ 0.234e-11■■■■■ 34.8
ATG3-209ENST00000496423 TIAM2Q8IVF5 1701 aa16.45■□□□□ 0.22
ATG3-209ENST00000496423 ZNF831Q5JPB2 1677 aa16.44■□□□□ 0.22
ATG3-209ENST00000496423 KIF24Q5T7B8 1368 aa16.44■□□□□ 0.22
ATG3-209ENST00000496423 HSPA8P11142 646 aaKnown RBP16.44■□□□□ 0.22
ATG3-209ENST00000496423 HSP90AB2PQ58FF8 381 aa16.44■□□□□ 0.22
ATG3-209ENST00000496423 CFAP44Q96MT7 982 aa16.44■□□□□ 0.22
ATG3-209ENST00000496423 FLT4P35916 1363 aa16.43■□□□□ 0.22
ATG3-209ENST00000496423 IQCA1LA6NCM1 817 aa16.43■□□□□ 0.22
ATG3-209ENST00000496423 SLC4A2P04920 1241 aa16.43■□□□□ 0.22
ATG3-209ENST00000496423 DEFB115Q30KQ5 88 aa16.43■□□□□ 0.22
ATG3-209ENST00000496423 ERFEQ4G0M1 354 aa16.43■□□□□ 0.22
ATG3-209ENST00000496423 VIRMAQ69YN4 1812 aaKnown RBP16.42■□□□□ 0.22
ATG3-209ENST00000496423 SLC24A1O60721 1099 aa16.42■□□□□ 0.22
ATG3-209ENST00000496423 ZPR1O75312 459 aa16.42■□□□□ 0.22
ATG3-209ENST00000496423 FKBP8Q14318 412 aa16.42■□□□□ 0.22
ATG3-209ENST00000496423 LDHDQ86WU2 507 aa16.42■□□□□ 0.22
ATG3-209ENST00000496423 H0YIN7 160 aa16.41■□□□□ 0.22
ATG3-209ENST00000496423 DDR1Q08345 913 aa16.41■□□□□ 0.22
ATG3-209ENST00000496423 USP42Q9H9J4 1324 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms