RNA–Protein interactions for RNA: ENST00000495940.2

TFE3-205, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-205ENST00000495940 CGNL1Q0VF96 1302 aa18.62■□□□□ 0.57
TFE3-205ENST00000495940 SMG6Q86US8 1419 aaKnown RBP18.61■□□□□ 0.57
TFE3-205ENST00000495940 CYP27B1O15528 508 aa18.61■□□□□ 0.57
TFE3-205ENST00000495940 TATP17735 454 aaPredicted RBP18.61■□□□□ 0.57
TFE3-205ENST00000495940 C16orf71Q8IYS4 520 aaPredicted RBP18.61■□□□□ 0.57
TFE3-205ENST00000495940 COG3Q96JB2 828 aa18.61■□□□□ 0.57
TFE3-205ENST00000495940 PLEKHG2Q9H7P9 1386 aa18.6■□□□□ 0.57
TFE3-205ENST00000495940 GNPATO15228 680 aa18.6■□□□□ 0.57
TFE3-205ENST00000495940 C9orf131Q5VYM1 1079 aa18.59■□□□□ 0.57
TFE3-205ENST00000495940 PIGBQ92521 554 aa18.59■□□□□ 0.57
TFE3-205ENST00000495940 SMARCC1Q92922 1105 aaPredicted RBP18.59■□□□□ 0.57
TFE3-205ENST00000495940 SBF1O95248 1867 aa18.58■□□□□ 0.57
TFE3-205ENST00000495940 FSTL1Q12841 308 aa18.58■□□□□ 0.56
TFE3-205ENST00000495940 ITPK1Q13572 414 aa18.58■□□□□ 0.56
TFE3-205ENST00000495940 KIF20BQ96Q89 1820 aa18.58■□□□□ 0.56
TFE3-205ENST00000495940 LOC102724428A0A0B4J2F2 783 aa18.57■□□□□ 0.56
TFE3-205ENST00000495940 FCHSD2O94868 740 aa18.57■□□□□ 0.56
TFE3-205ENST00000495940 DPEP1P16444 411 aa18.57■□□□□ 0.56
TFE3-205ENST00000495940 SIK1P57059 783 aa18.57■□□□□ 0.56
TFE3-205ENST00000495940 COL5A3P25940 1745 aaPredicted RBP18.57■□□□□ 0.56
TFE3-205ENST00000495940 HSPA1AP0DMV8 641 aaKnown RBP18.56■□□□□ 0.56
TFE3-205ENST00000495940 HSPA1BP0DMV9 641 aaKnown RBP18.56■□□□□ 0.56
TFE3-205ENST00000495940 HMGB2P26583 209 aaKnown RBP18.56■□□□□ 0.56
TFE3-205ENST00000495940 TGFB2P61812 414 aa18.56■□□□□ 0.56
TFE3-205ENST00000495940 ANP32CO43423 234 aa18.54■□□□□ 0.56
TFE3-205ENST00000495940 RRAGCQ9HB90 399 aa18.53■□□□□ 0.56
TFE3-205ENST00000495940 TIAM2Q8IVF5 1701 aa18.52■□□□□ 0.56
TFE3-205ENST00000495940 HSP90AB2PQ58FF8 381 aa18.52■□□□□ 0.56
TFE3-205ENST00000495940 CARD11Q9BXL7 1154 aa18.52■□□□□ 0.56
TFE3-205ENST00000495940 RNF181Q9P0P0 153 aa18.52■□□□□ 0.56
TFE3-205ENST00000495940 ASAP1Q9ULH1 1129 aa18.52■□□□□ 0.56
TFE3-205ENST00000495940 INSRP06213 1382 aa18.52■□□□□ 0.55
TFE3-205ENST00000495940 KDM2BQ8NHM5 1336 aa18.51■□□□□ 0.55
TFE3-205ENST00000495940 KDRP35968 1356 aa18.51■□□□□ 0.55
TFE3-205ENST00000495940 KCNA3P22001 575 aa18.5■□□□□ 0.55
TFE3-205ENST00000495940 ATP6V1AP38606 617 aa18.5■□□□□ 0.55
TFE3-205ENST00000495940 GGNBP2Q9H3C7 697 aa18.5■□□□□ 0.55
TFE3-205ENST00000495940 CCDC87Q9NVE4 849 aa18.5■□□□□ 0.55
TFE3-205ENST00000495940 ZNF831Q5JPB2 1677 aa18.5■□□□□ 0.55
TFE3-205ENST00000495940 NCAPD2Q15021 1401 aa18.49■□□□□ 0.55
TFE3-205ENST00000495940 FLT4P35916 1363 aa18.49■□□□□ 0.55
TFE3-205ENST00000495940 MYH14Q7Z406 1995 aaKnown RBP18.49■□□□□ 0.55
TFE3-205ENST00000495940 ANKRD26Q9UPS8 1709 aa18.49■□□□□ 0.55
TFE3-205ENST00000495940 TMF1P82094 1093 aa18.48■□□□□ 0.55
TFE3-205ENST00000495940 SMC1BQ8NDV3 1235 aa18.48■□□□□ 0.55
TFE3-205ENST00000495940 DCAF5Q96JK2 942 aa18.48■□□□□ 0.55
TFE3-205ENST00000495940 TMOD3Q9NYL9 352 aa18.48■□□□□ 0.55
TFE3-205ENST00000495940 DDX10Q13206 875 aaKnown RBP18.47■□□□□ 0.55
TFE3-205ENST00000495940 NKX1-1Q15270 411 aaPredicted RBP18.47■□□□□ 0.55
TFE3-205ENST00000495940 GYS1P13807 737 aa18.46■□□□□ 0.55
TFE3-205ENST00000495940 RTCBQ9Y3I0 505 aaKnown RBP18.46■□□□□ 0.55
TFE3-205ENST00000495940 CCDC88AQ3V6T2 1871 aa18.46■□□□□ 0.54
TFE3-205ENST00000495940 NLGN1Q8N2Q7 840 aa18.45■□□□□ 0.54
TFE3-205ENST00000495940 SLC4A9Q96Q91 983 aa18.45■□□□□ 0.54
TFE3-205ENST00000495940 ATG3Q9NT62 314 aa18.45■□□□□ 0.54
TFE3-205ENST00000495940 FYB1O15117 783 aa18.44■□□□□ 0.54
TFE3-205ENST00000495940 SLC34A2O95436 690 aa18.44■□□□□ 0.54
TFE3-205ENST00000495940 RASSF7Q02833 373 aa18.44■□□□□ 0.54
TFE3-205ENST00000495940 TRAPPC3LQ5T215 181 aa18.44■□□□□ 0.54
TFE3-205ENST00000495940 ARHGEF1Q92888 912 aaKnown RBP18.44■□□□□ 0.54
TFE3-205ENST00000495940 PUS7Q96PZ0 661 aaKnown RBP18.44■□□□□ 0.54
TFE3-205ENST00000495940 PARP3Q9Y6F1 533 aa18.44■□□□□ 0.54
TFE3-205ENST00000495940 PIM2Q9P1W9 311 aa18.43■□□□□ 0.54
TFE3-205ENST00000495940 DLEC1Q9Y238 1755 aa18.42■□□□□ 0.54
TFE3-205ENST00000495940 CHRNA5P30532 468 aa18.42■□□□□ 0.54
TFE3-205ENST00000495940 DALRD3Q5D0E6 543 aaKnown RBP18.42■□□□□ 0.54
TFE3-205ENST00000495940 TESK2Q96S53 571 aa18.42■□□□□ 0.54
TFE3-205ENST00000495940 EMILIN1Q9Y6C2 1016 aa18.42■□□□□ 0.54
TFE3-205ENST00000495940 TJP1Q07157 1748 aa18.41■□□□□ 0.54
TFE3-205ENST00000495940 SPG7Q9UQ90 795 aa18.41■□□□□ 0.54
TFE3-205ENST00000495940 KIF24Q5T7B8 1368 aa18.41■□□□□ 0.54
TFE3-205ENST00000495940 ADAMTS7Q9UKP4 1686 aa18.41■□□□□ 0.54
TFE3-205ENST00000495940 KDM6AO15550 1401 aaPredicted RBP18.4■□□□□ 0.54
TFE3-205ENST00000495940 AFDNP55196 1824 aaKnown RBP18.4■□□□□ 0.54
TFE3-205ENST00000495940 RFC4P35249 363 aa18.4■□□□□ 0.54
TFE3-205ENST00000495940 EIF4G2P78344 907 aaKnown RBP eCLIP18.4■□□□□ 0.54
TFE3-205ENST00000495940 DDR1Q08345 913 aa18.4■□□□□ 0.54
TFE3-205ENST00000495940 SUPT16HQ9Y5B9 1047 aaKnown RBP18.4■□□□□ 0.54
TFE3-205ENST00000495940 PHKG2P15735 406 aa18.39■□□□□ 0.53
TFE3-205ENST00000495940 ADRA2BP18089 450 aa18.39■□□□□ 0.53
TFE3-205ENST00000495940 RBM42Q9BTD8 480 aaKnown RBP18.39■□□□□ 0.53
TFE3-205ENST00000495940 SRP68Q9UHB9 627 aaKnown RBP18.39■□□□□ 0.53
TFE3-205ENST00000495940 CNTNAP4Q9C0A0 1308 aa18.39■□□□□ 0.53
TFE3-205ENST00000495940 RPS6KA4O75676 772 aa18.36■□□□□ 0.53
TFE3-205ENST00000495940 FKBP8Q14318 412 aa18.36■□□□□ 0.53
TFE3-205ENST00000495940 ZC3H4Q9UPT8 1303 aaKnown RBP18.35■□□□□ 0.53
TFE3-205ENST00000495940 ST20-MTHFSA0A0A6YYL1 179 aa18.35■□□□□ 0.53
TFE3-205ENST00000495940 VEGFAP15692 232 aaPredicted RBP18.35■□□□□ 0.53
TFE3-205ENST00000495940 RC3H1Q5TC82 1133 aaKnown RBP18.35■□□□□ 0.53
TFE3-205ENST00000495940 IFNL2Q8IZJ0 200 aa18.35■□□□□ 0.53
TFE3-205ENST00000495940 USP42Q9H9J4 1324 aaKnown RBP18.34■□□□□ 0.53
TFE3-205ENST00000495940 GLTPD2A6NH11 291 aa18.34■□□□□ 0.53
TFE3-205ENST00000495940 EYA1Q99502 592 aa18.34■□□□□ 0.53
TFE3-205ENST00000495940 MKRN1Q9UHC7 482 aaKnown RBP18.34■□□□□ 0.53
TFE3-205ENST00000495940 NRXN2Q9P2S2 1712 aa18.34■□□□□ 0.53
TFE3-205ENST00000495940 FOXN1O15353 648 aa18.33■□□□□ 0.52
TFE3-205ENST00000495940 PPM1GO15355 546 aaPredicted RBP18.33■□□□□ 0.52
TFE3-205ENST00000495940 NEFLP07196 543 aa18.32■□□□□ 0.52
TFE3-205ENST00000495940 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.32■□□□□ 0.52
TFE3-205ENST00000495940 DICER1Q9UPY3 1922 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms