RNA–Protein interactions for RNA: ENST00000495862.1

GABRE-212, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 3

Gene GABRE, Length 238 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-212ENST00000495862 PARP4Q9UKK3 1724 aaKnown RBP6.15□□□□□ -1.42
GABRE-212ENST00000495862 LRRC37A3O60309 1634 aa6.14□□□□□ -1.43
GABRE-212ENST00000495862 THSD7AQ9UPZ6 1657 aa6.14□□□□□ -1.43
GABRE-212ENST00000495862 TMPOP42166 694 aaKnown RBP6.14□□□□□ -1.43
GABRE-212ENST00000495862 LMOD3Q0VAK6 560 aa6.14□□□□□ -1.43
GABRE-212ENST00000495862 NKX1-1Q15270 411 aaPredicted RBP6.14□□□□□ -1.43
GABRE-212ENST00000495862 NGEFQ8N5V2 710 aa6.14□□□□□ -1.43
GABRE-212ENST00000495862 IL17REQ8NFR9 667 aa6.14□□□□□ -1.43
GABRE-212ENST00000495862 PPP1R1BQ9UD71 204 aaPredicted RBP6.14□□□□□ -1.43
GABRE-212ENST00000495862 TSPYL4Q9UJ04 414 aa6.14□□□□□ -1.43
GABRE-212ENST00000495862 ATF5Q9Y2D1 282 aaPredicted RBP6.14□□□□□ -1.43
GABRE-212ENST00000495862 PALLDQ8WX93 1383 aa6.14□□□□□ -1.43
GABRE-212ENST00000495862 MAP3K5Q99683 1374 aa6.14□□□□□ -1.43
GABRE-212ENST00000495862 LOC102724428A0A0B4J2F2 783 aa6.13□□□□□ -1.43
GABRE-212ENST00000495862 ZBTB7AO95365 584 aa6.13□□□□□ -1.43
GABRE-212ENST00000495862 EIF2S2P20042 333 aaKnown RBP6.13□□□□□ -1.43
GABRE-212ENST00000495862 CANXP27824 592 aaKnown RBP6.13□□□□□ -1.43
GABRE-212ENST00000495862 SIK1P57059 783 aa6.13□□□□□ -1.43
GABRE-212ENST00000495862 TAF7Q15545 349 aaPredicted RBP6.13□□□□□ -1.43
GABRE-212ENST00000495862 SMIM5Q71RC9 77 aa6.13□□□□□ -1.43
GABRE-212ENST00000495862 PROM2Q8N271 834 aa6.13□□□□□ -1.43
GABRE-212ENST00000495862 PNISRQ8TF01 805 aaKnown RBP6.13□□□□□ -1.43
GABRE-212ENST00000495862 NECTIN2Q92692 538 aa6.13□□□□□ -1.43
GABRE-212ENST00000495862 ELL2O00472 640 aaPredicted RBP6.12□□□□□ -1.43
GABRE-212ENST00000495862 GNPATO15228 680 aa6.12□□□□□ -1.43
GABRE-212ENST00000495862 NPHP1O15259 732 aa6.12□□□□□ -1.43
GABRE-212ENST00000495862 KCNQ3O43525 872 aa6.12□□□□□ -1.43
GABRE-212ENST00000495862 HTATSF1O43719 755 aaKnown RBP6.12□□□□□ -1.43
GABRE-212ENST00000495862 HMGB2P26583 209 aaKnown RBP6.12□□□□□ -1.43
GABRE-212ENST00000495862 KDRP35968 1356 aa6.12□□□□□ -1.43
GABRE-212ENST00000495862 SLC15A2Q16348 729 aa6.12□□□□□ -1.43
GABRE-212ENST00000495862 SLC27A3Q5K4L6 730 aa6.12□□□□□ -1.43
GABRE-212ENST00000495862 TRAPPC3LQ5T215 181 aa6.12□□□□□ -1.43
GABRE-212ENST00000495862 FMNL2Q96PY5 1086 aa6.12□□□□□ -1.43
GABRE-212ENST00000495862 PLEKHF1Q96S99 279 aa6.12□□□□□ -1.43
GABRE-212ENST00000495862 WNK3Q9BYP7 1800 aa6.12□□□□□ -1.43
GABRE-212ENST00000495862 LRRC4BQ9NT99 713 aa6.12□□□□□ -1.43
GABRE-212ENST00000495862 RGPD1P0DJD0 1748 aa6.11□□□□□ -1.43
GABRE-212ENST00000495862 COL3A1P02461 1466 aaPredicted RBP6.11□□□□□ -1.43
GABRE-212ENST00000495862 STARD3NLO95772 234 aa6.11□□□□□ -1.43
GABRE-212ENST00000495862 RFC4P35249 363 aa6.11□□□□□ -1.43
GABRE-212ENST00000495862 PIP4K2AP48426 406 aaPredicted RBP6.11□□□□□ -1.43
GABRE-212ENST00000495862 MSL1Q68DK7 614 aa6.11□□□□□ -1.43
GABRE-212ENST00000495862 ZNF790Q6PG37 636 aa6.11□□□□□ -1.43
GABRE-212ENST00000495862 DNAJC10Q8IXB1 793 aa6.11□□□□□ -1.43
GABRE-212ENST00000495862 LINC00116Q8NCU8 138 aa6.11□□□□□ -1.43
GABRE-212ENST00000495862 YTHDC1Q96MU7 727 aaKnown RBP6.11□□□□□ -1.43
GABRE-212ENST00000495862 RTCBQ9Y3I0 505 aaKnown RBP6.11□□□□□ -1.43
GABRE-212ENST00000495862 SBF2Q86WG5 1849 aa6.11□□□□□ -1.43
GABRE-212ENST00000495862 SRCAPQ6ZRS2 3230 aa6.1□□□□□ -1.43
GABRE-212ENST00000495862 BCL9O00512 1426 aa6.1□□□□□ -1.43
GABRE-212ENST00000495862 CCER2I3L3R5 266 aa6.1□□□□□ -1.43
GABRE-212ENST00000495862 ZPR1O75312 459 aa6.1□□□□□ -1.43
GABRE-212ENST00000495862 SNRPA1P09661 255 aaKnown RBP6.1□□□□□ -1.43
GABRE-212ENST00000495862 MYL6BP14649 208 aa6.1□□□□□ -1.43
GABRE-212ENST00000495862 POLD1P28340 1107 aa6.1□□□□□ -1.43
GABRE-212ENST00000495862 CALD1Q05682 793 aaKnown RBP6.1□□□□□ -1.43
GABRE-212ENST00000495862 ZNF827Q17R98 1081 aa6.1□□□□□ -1.43
GABRE-212ENST00000495862 PELP1Q8IZL8 1130 aaKnown RBP6.1□□□□□ -1.43
GABRE-212ENST00000495862 ZNF496Q96IT1 587 aaPredicted RBP6.1□□□□□ -1.43
GABRE-212ENST00000495862 PDGFDQ9GZP0 370 aaPredicted RBP6.1□□□□□ -1.43
GABRE-212ENST00000495862 BTAF1O14981 1849 aa6.1□□□□□ -1.43
GABRE-212ENST00000495862 DOT1LQ8TEK3 1739 aa6.1□□□□□ -1.43
GABRE-212ENST00000495862 KDM6AO15550 1401 aaPredicted RBP6.09□□□□□ -1.43
GABRE-212ENST00000495862 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.09□□□□□ -1.43
GABRE-212ENST00000495862 FAM177BA6PVY3 158 aa6.09□□□□□ -1.43
GABRE-212ENST00000495862 A1BGP04217 495 aa6.09□□□□□ -1.43
GABRE-212ENST00000495862 GNAI1P63096 354 aa6.09□□□□□ -1.43
GABRE-212ENST00000495862 HNRNPUQ00839 825 aaKnown RBP eCLIP6.09□□□□□ -1.43
GABRE-212ENST00000495862 AIMP1Q12904 312 aaKnown RBP6.09□□□□□ -1.43
GABRE-212ENST00000495862 ITPK1Q13572 414 aa6.09□□□□□ -1.43
GABRE-212ENST00000495862 BICDL1Q6ZP65 573 aa6.09□□□□□ -1.43
GABRE-212ENST00000495862 TEX13AQ9BXU3 409 aaPredicted RBP6.09□□□□□ -1.43
GABRE-212ENST00000495862 ANO8Q9HCE9 1232 aaPredicted RBP6.09□□□□□ -1.43
GABRE-212ENST00000495862 ITGB4P16144 1822 aa6.09□□□□□ -1.44
GABRE-212ENST00000495862 PRAMEF22A3QJZ6 481 aa6.08□□□□□ -1.44
GABRE-212ENST00000495862 DCAF8L1A6NGE4 600 aa6.08□□□□□ -1.44
GABRE-212ENST00000495862 TCERG1O14776 1098 aaKnown RBP6.08□□□□□ -1.44
GABRE-212ENST00000495862 CRKLP46109 303 aaKnown RBP6.08□□□□□ -1.44
GABRE-212ENST00000495862 COL23A1Q86Y22 540 aaPredicted RBP6.08□□□□□ -1.44
GABRE-212ENST00000495862 FLAD1Q8NFF5 587 aa6.08□□□□□ -1.44
GABRE-212ENST00000495862 TSR2Q969E8 191 aaKnown RBP6.08□□□□□ -1.44
GABRE-212ENST00000495862 ZNF428Q96B54 188 aa6.08□□□□□ -1.44
GABRE-212ENST00000495862 SPON1Q9HCB6 807 aa6.08□□□□□ -1.44
GABRE-212ENST00000495862 CCDC87Q9NVE4 849 aa6.08□□□□□ -1.44
GABRE-212ENST00000495862 WWC3Q9ULE0 1092 aa6.08□□□□□ -1.44
GABRE-212ENST00000495862 TRIM35Q9UPQ4 493 aa6.08□□□□□ -1.44
GABRE-212ENST00000495862 TBC1D2BQ9UPU7 963 aa6.08□□□□□ -1.44
GABRE-212ENST00000495862 USP16Q9Y5T5 823 aa6.08□□□□□ -1.44
GABRE-212ENST00000495862 PKD1L3Q7Z443 1732 aa6.08□□□□□ -1.44
GABRE-212ENST00000495862 NCAPD2Q15021 1401 aa6.08□□□□□ -1.44
GABRE-212ENST00000495862 NHSQ6T4R5 1651 aa6.07□□□□□ -1.44
GABRE-212ENST00000495862 GTF2E1P29083 439 aaPredicted RBP6.07□□□□□ -1.44
GABRE-212ENST00000495862 EIF4A1P60842 406 aaKnown RBP6.07□□□□□ -1.44
GABRE-212ENST00000495862 GOLGA2Q08379 1002 aa6.07□□□□□ -1.44
GABRE-212ENST00000495862 KRT24Q2M2I5 525 aa6.07□□□□□ -1.44
GABRE-212ENST00000495862 WWC1Q8IX03 1113 aa6.07□□□□□ -1.44
GABRE-212ENST00000495862 ARHGEF1Q92888 912 aaKnown RBP6.07□□□□□ -1.44
GABRE-212ENST00000495862 AKT1S1Q96B36 256 aa6.07□□□□□ -1.44
GABRE-212ENST00000495862 SLC4A9Q96Q91 983 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms