RNA–Protein interactions for RNA: ENST00000495787.1

ECHDC3-204, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 3

Gene ECHDC3, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-204ENST00000495787 ANO8Q9HCE9 1232 aaPredicted RBP13.87□□□□□ -0.19
ECHDC3-204ENST00000495787 LAS1LQ9Y4W2 734 aaKnown RBP13.87□□□□□ -0.19
ECHDC3-204ENST00000495787 CSB-PGBD3P0DP91 1061 aa13.86□□□□□ -0.19
ECHDC3-204ENST00000495787 RARSP54136 660 aaKnown RBP13.86□□□□□ -0.19
ECHDC3-204ENST00000495787 DDB1Q16531 1140 aa13.86□□□□□ -0.19
ECHDC3-204ENST00000495787 MCM10Q7L590 875 aa13.86□□□□□ -0.19
ECHDC3-204ENST00000495787 ZNF784Q8NCA9 323 aaPredicted RBP13.86□□□□□ -0.19
ECHDC3-204ENST00000495787 NLRP2Q9NX02 1062 aa13.86□□□□□ -0.19
ECHDC3-204ENST00000495787 ZBTB7AO95365 584 aa13.85□□□□□ -0.19
ECHDC3-204ENST00000495787 MBIPQ9NS73 344 aa13.85□□□□□ -0.19
ECHDC3-204ENST00000495787 PPP4R2Q9NY27 417 aa13.85□□□□□ -0.19
ECHDC3-204ENST00000495787 CHL1O00533 1208 aa13.84□□□□□ -0.19
ECHDC3-204ENST00000495787 PLIN1O60240 522 aa13.84□□□□□ -0.19
ECHDC3-204ENST00000495787 BCAR3O75815 825 aa13.84□□□□□ -0.19
ECHDC3-204ENST00000495787 PTGER2P43116 358 aa13.84□□□□□ -0.19
ECHDC3-204ENST00000495787 ZNF428Q96B54 188 aa13.84□□□□□ -0.19
ECHDC3-204ENST00000495787 PDGFDQ9GZP0 370 aaPredicted RBP13.84□□□□□ -0.19
ECHDC3-204ENST00000495787 VIRMAQ69YN4 1812 aaKnown RBP13.84□□□□□ -0.19
ECHDC3-204ENST00000495787 SBF2Q86WG5 1849 aa13.84□□□□□ -0.19
ECHDC3-204ENST00000495787 WDR17Q8IZU2 1322 aa13.84□□□□□ -0.19
ECHDC3-204ENST00000495787 UTRNP46939 3433 aa13.83□□□□□ -0.19
ECHDC3-204ENST00000495787 TATP17735 454 aaPredicted RBP13.83□□□□□ -0.2
ECHDC3-204ENST00000495787 AKAP4Q5JQC9 854 aa13.83□□□□□ -0.2
ECHDC3-204ENST00000495787 ZNF530Q6P9A1 599 aaPredicted RBP13.83□□□□□ -0.2
ECHDC3-204ENST00000495787 RAPGEF4Q8WZA2 1011 aa13.83□□□□□ -0.2
ECHDC3-204ENST00000495787 BCL9O00512 1426 aa13.82□□□□□ -0.2
ECHDC3-204ENST00000495787 TOM1L2Q6ZVM7 507 aa13.82□□□□□ -0.2
ECHDC3-204ENST00000495787 PROM2Q8N271 834 aa13.82□□□□□ -0.2
ECHDC3-204ENST00000495787 CDCA7Q9BWT1 371 aaPredicted RBP13.82□□□□□ -0.2
ECHDC3-204ENST00000495787 BABAM1Q9NWV8 329 aa13.82□□□□□ -0.2
ECHDC3-204ENST00000495787 STK32BQ9NY57 414 aa13.82□□□□□ -0.2
ECHDC3-204ENST00000495787 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.82□□□□□ -0.2
ECHDC3-204ENST00000495787 PKD1L3Q7Z443 1732 aa13.81□□□□□ -0.2
ECHDC3-204ENST00000495787 ALDH1L2Q3SY69 923 aa13.81□□□□□ -0.2
ECHDC3-204ENST00000495787 PTF1AQ7RTS3 328 aa13.81□□□□□ -0.2
ECHDC3-204ENST00000495787 IL17REQ8NFR9 667 aa13.81□□□□□ -0.2
ECHDC3-204ENST00000495787 SYT17Q9BSW7 474 aa13.81□□□□□ -0.2
ECHDC3-204ENST00000495787 FHDC1Q9C0D6 1143 aaPredicted RBP13.81□□□□□ -0.2
ECHDC3-204ENST00000495787 ATF5Q9Y2D1 282 aaPredicted RBP13.81□□□□□ -0.2
ECHDC3-204ENST00000495787 CEMIPQ8WUJ3 1361 aa13.81□□□□□ -0.2
ECHDC3-204ENST00000495787 VAMP4O75379 141 aa13.8□□□□□ -0.2
ECHDC3-204ENST00000495787 C1orf141Q5JVX7 400 aa13.8□□□□□ -0.2
ECHDC3-204ENST00000495787 SPG7Q9UQ90 795 aa13.8□□□□□ -0.2
ECHDC3-204ENST00000495787 MEGF6O75095 1541 aa13.8□□□□□ -0.2
ECHDC3-204ENST00000495787 ADAMTS7Q9UKP4 1686 aa13.79□□□□□ -0.2
ECHDC3-204ENST00000495787 PDE3AQ14432 1141 aa13.79□□□□□ -0.2
ECHDC3-204ENST00000495787 TAF7Q15545 349 aaPredicted RBP13.79□□□□□ -0.2
ECHDC3-204ENST00000495787 SLC15A2Q16348 729 aa13.79□□□□□ -0.2
ECHDC3-204ENST00000495787 TXNRD1Q16881 649 aa13.79□□□□□ -0.2
ECHDC3-204ENST00000495787 MARCH10Q8NA82 808 aaPredicted RBP13.79□□□□□ -0.2
ECHDC3-204ENST00000495787 EXOC6Q8TAG9 804 aa13.79□□□□□ -0.2
ECHDC3-204ENST00000495787 CARD10Q9BWT7 1032 aa13.79□□□□□ -0.2
ECHDC3-204ENST00000495787 MTFR1LQ9H019 292 aa13.79□□□□□ -0.2
ECHDC3-204ENST00000495787 RNMTO43148 476 aaKnown RBP13.78□□□□□ -0.2
ECHDC3-204ENST00000495787 CANXP27824 592 aaKnown RBP13.78□□□□□ -0.2
ECHDC3-204ENST00000495787 BRPF1P55201 1214 aaPredicted RBP13.78□□□□□ -0.2
ECHDC3-204ENST00000495787 C1QTNF8P60827 252 aa13.78□□□□□ -0.2
ECHDC3-204ENST00000495787 TWISTNBQ3B726 338 aaPredicted RBP13.78□□□□□ -0.2
ECHDC3-204ENST00000495787 C20orf194Q5TEA3 1177 aa13.78□□□□□ -0.2
ECHDC3-204ENST00000495787 C8orf58Q8NAV2 365 aa13.78□□□□□ -0.2
ECHDC3-204ENST00000495787 SSH1Q8WYL5 1049 aa13.78□□□□□ -0.2
ECHDC3-204ENST00000495787 CRBNQ96SW2 442 aa13.78□□□□□ -0.2
ECHDC3-204ENST00000495787 SMC4Q9NTJ3 1288 aa13.78□□□□□ -0.2
ECHDC3-204ENST00000495787 TSPYL4Q9UJ04 414 aa13.78□□□□□ -0.2
ECHDC3-204ENST00000495787 TSPYL6Q8N831 410 aa13.77□□□□□ -0.21
ECHDC3-204ENST00000495787 BCL2L13Q9BXK5 485 aa13.77□□□□□ -0.21
ECHDC3-204ENST00000495787 WNK3Q9BYP7 1800 aa13.77□□□□□ -0.21
ECHDC3-204ENST00000495787 SCN11AQ9UI33 1791 aa13.77□□□□□ -0.21
ECHDC3-204ENST00000495787 CHD4Q14839 1912 aa13.76□□□□□ -0.21
ECHDC3-204ENST00000495787 SIPA1L3O60292 1781 aaPredicted RBP13.76□□□□□ -0.21
ECHDC3-204ENST00000495787 KDM3BQ7LBC6 1761 aa13.76□□□□□ -0.21
ECHDC3-204ENST00000495787 MS4A1P11836 297 aa13.76□□□□□ -0.21
ECHDC3-204ENST00000495787 ZKSCAN2Q63HK3 967 aa13.76□□□□□ -0.21
ECHDC3-204ENST00000495787 FRAT1Q92837 279 aaPredicted RBP13.76□□□□□ -0.21
ECHDC3-204ENST00000495787 SGIP1Q9BQI5 828 aa13.76□□□□□ -0.21
ECHDC3-204ENST00000495787 LGR6Q9HBX8 967 aa13.76□□□□□ -0.21
ECHDC3-204ENST00000495787 SOS1Q07889 1333 aaPredicted RBP13.75□□□□□ -0.21
ECHDC3-204ENST00000495787 KIF16BQ96L93 1317 aa13.75□□□□□ -0.21
ECHDC3-204ENST00000495787 PHKG2P15735 406 aa13.75□□□□□ -0.21
ECHDC3-204ENST00000495787 MPRIPQ6WCQ1 1025 aa13.75□□□□□ -0.21
ECHDC3-204ENST00000495787 IFNL2Q8IZJ0 200 aa13.75□□□□□ -0.21
ECHDC3-204ENST00000495787 MIS18AQ9NYP9 233 aa13.75□□□□□ -0.21
ECHDC3-204ENST00000495787 EXOC5O00471 708 aa13.74□□□□□ -0.21
ECHDC3-204ENST00000495787 ELL2O00472 640 aaPredicted RBP13.74□□□□□ -0.21
ECHDC3-204ENST00000495787 IPO8O15397 1037 aaKnown RBP13.74□□□□□ -0.21
ECHDC3-204ENST00000495787 IL2RBP14784 551 aa13.74□□□□□ -0.21
ECHDC3-204ENST00000495787 TEFQ10587 303 aa13.74□□□□□ -0.21
ECHDC3-204ENST00000495787 MRPL50Q8N5N7 158 aaKnown RBP13.74□□□□□ -0.21
ECHDC3-204ENST00000495787 ARXQ96QS3 562 aa13.74□□□□□ -0.21
ECHDC3-204ENST00000495787 HSP90AB1P08238 724 aaKnown RBP13.73□□□□□ -0.21
ECHDC3-204ENST00000495787 CACNA1FO60840 1977 aa13.72□□□□□ -0.21
ECHDC3-204ENST00000495787 KRT24Q2M2I5 525 aa13.72□□□□□ -0.21
ECHDC3-204ENST00000495787 B4GALNT3Q6L9W6 998 aa13.72□□□□□ -0.21
ECHDC3-204ENST00000495787 ZCRB1Q8TBF4 217 aaKnown RBP13.72□□□□□ -0.21
ECHDC3-204ENST00000495787 ARHGAP45Q92619 1136 aa13.72□□□□□ -0.21
ECHDC3-204ENST00000495787 CCDC136Q96JN2 1154 aa13.72□□□□□ -0.21
ECHDC3-204ENST00000495787 NOB1Q9ULX3 412 aaKnown RBP13.72□□□□□ -0.21
ECHDC3-204ENST00000495787 SHANK3Q9BYB0 1731 aa13.72□□□□□ -0.21
ECHDC3-204ENST00000495787 TNS2Q63HR2 1409 aa13.72□□□□□ -0.21
ECHDC3-204ENST00000495787 PCDH11XQ9BZA7 1347 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms