RNA–Protein interactions for RNA: ENST00000495555.6

IFT27-211, Transcript of intraflagellar transport 27, humanhuman

TSL 2

Gene IFT27, Length 744 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT27-211ENST00000495555 MAP3K5Q99683 1374 aa16.36■□□□□ 0.21
IFT27-211ENST00000495555 C5P01031 1676 aa16.35■□□□□ 0.21
IFT27-211ENST00000495555 SSFA2P28290 1259 aa16.34■□□□□ 0.21
IFT27-211ENST00000495555 C1QTNF8P60827 252 aa16.34■□□□□ 0.21
IFT27-211ENST00000495555 AKAP4Q5JQC9 854 aa16.34■□□□□ 0.21
IFT27-211ENST00000495555 RBM42Q9BTD8 480 aaKnown RBP16.34■□□□□ 0.21
IFT27-211ENST00000495555 HMOX1P09601 288 aa16.33■□□□□ 0.2
IFT27-211ENST00000495555 LINC00116Q8NCU8 138 aa16.33■□□□□ 0.2
IFT27-211ENST00000495555 CFAP53Q96M91 514 aa16.33■□□□□ 0.2
IFT27-211ENST00000495555 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.32■□□□□ 0.2
IFT27-211ENST00000495555 PHF14O94880 888 aa16.32■□□□□ 0.2
IFT27-211ENST00000495555 ITPK1Q13572 414 aa16.32■□□□□ 0.2
IFT27-211ENST00000495555 MSL1Q68DK7 614 aa16.32■□□□□ 0.2
IFT27-211ENST00000495555 NFATC2IPQ8NCF5 419 aa16.32■□□□□ 0.2
IFT27-211ENST00000495555 U2SURPO15042 1029 aaKnown RBP16.31■□□□□ 0.2
IFT27-211ENST00000495555 GNPATO15228 680 aa16.31■□□□□ 0.2
IFT27-211ENST00000495555 GPR162Q16538 588 aa16.31■□□□□ 0.2
IFT27-211ENST00000495555 ZNF784Q8NCA9 323 aaPredicted RBP16.31■□□□□ 0.2
IFT27-211ENST00000495555 TAF1LQ8IZX4 1826 aa16.31■□□□□ 0.2
IFT27-211ENST00000495555 TUBGCP6Q96RT7 1819 aa16.31■□□□□ 0.2
IFT27-211ENST00000495555 C4BP0C0L5 1744 aa16.31■□□□□ 0.2
IFT27-211ENST00000495555 KDM6AO15550 1401 aaPredicted RBP16.3■□□□□ 0.2
IFT27-211ENST00000495555 RTCBQ9Y3I0 505 aaKnown RBP16.3■□□□□ 0.2
IFT27-211ENST00000495555 TRAPPC3LQ5T215 181 aa16.29■□□□□ 0.2
IFT27-211ENST00000495555 RC3H1Q5TC82 1133 aaKnown RBP16.29■□□□□ 0.2
IFT27-211ENST00000495555 NUDCQ9Y266 331 aa16.29■□□□□ 0.2
IFT27-211ENST00000495555 PTCD1O75127 700 aaKnown RBP16.28■□□□□ 0.2
IFT27-211ENST00000495555 COL24A1Q17RW2 1714 aa16.28■□□□□ 0.2
IFT27-211ENST00000495555 ADRA2BP18089 450 aa16.27■□□□□ 0.2
IFT27-211ENST00000495555 MTHFSDQ2M296 383 aaKnown RBP16.27■□□□□ 0.2
IFT27-211ENST00000495555 SLC52A2Q9HAB3 445 aa16.27■□□□□ 0.2
IFT27-211ENST00000495555 CD2APQ9Y5K6 639 aa16.27■□□□□ 0.2
IFT27-211ENST00000495555 RNMTO43148 476 aaKnown RBP16.26■□□□□ 0.19
IFT27-211ENST00000495555 PELP1Q8IZL8 1130 aaKnown RBP16.26■□□□□ 0.19
IFT27-211ENST00000495555 SLC4A9Q96Q91 983 aa16.26■□□□□ 0.19
IFT27-211ENST00000495555 LGR6Q9HBX8 967 aa16.26■□□□□ 0.19
IFT27-211ENST00000495555 CNTNAP4Q9C0A0 1308 aa16.25■□□□□ 0.19
IFT27-211ENST00000495555 RPS6KA4O75676 772 aa16.25■□□□□ 0.19
IFT27-211ENST00000495555 AMIGO3Q86WK7 504 aa16.25■□□□□ 0.19
IFT27-211ENST00000495555 GAS2L2Q8NHY3 880 aa16.25■□□□□ 0.19
IFT27-211ENST00000495555 SLC34A2O95436 690 aa16.24■□□□□ 0.19
IFT27-211ENST00000495555 RFC4P35249 363 aa16.24■□□□□ 0.19
IFT27-211ENST00000495555 SMIM5Q71RC9 77 aa16.24■□□□□ 0.19
IFT27-211ENST00000495555 NLGN1Q8N2Q7 840 aa16.24■□□□□ 0.19
IFT27-211ENST00000495555 NLGN2Q8NFZ4 835 aa16.24■□□□□ 0.19
IFT27-211ENST00000495555 UBR3Q6ZT12 1888 aa16.24■□□□□ 0.19
IFT27-211ENST00000495555 GRIN3BO60391 1043 aa16.23■□□□□ 0.19
IFT27-211ENST00000495555 PPP2R1AP30153 589 aa16.23■□□□□ 0.19
IFT27-211ENST00000495555 ZNF831Q5JPB2 1677 aa16.23■□□□□ 0.19
IFT27-211ENST00000495555 GNAT3A8MTJ3 354 aa16.22■□□□□ 0.19
IFT27-211ENST00000495555 ARHGEF1Q92888 912 aaKnown RBP16.22■□□□□ 0.19
IFT27-211ENST00000495555 SCN11AQ9UI33 1791 aa16.21■□□□□ 0.19
IFT27-211ENST00000495555 CRKLP46109 303 aaKnown RBP16.21■□□□□ 0.19
IFT27-211ENST00000495555 TEFQ10587 303 aa16.21■□□□□ 0.19
IFT27-211ENST00000495555 COL3A1P02461 1466 aaPredicted RBP16.21■□□□□ 0.19
IFT27-211ENST00000495555 MMP10P09238 476 aa16.2■□□□□ 0.18
IFT27-211ENST00000495555 U2AF1L5P0DN76 240 aaPredicted RBP16.2■□□□□ 0.18
IFT27-211ENST00000495555 U2AF1Q01081 240 aaKnown RBP eCLIP16.2■□□□□ 0.18
IFT27-211ENST00000495555 TTC5Q8N0Z6 440 aa16.2■□□□□ 0.18
IFT27-211ENST00000495555 FCHSD2O94868 740 aa16.19■□□□□ 0.18
IFT27-211ENST00000495555 PRKAR2BP31323 418 aa16.19■□□□□ 0.18
IFT27-211ENST00000495555 SLC39A6Q13433 755 aa16.19■□□□□ 0.18
IFT27-211ENST00000495555 VSIG10Q8N0Z9 540 aa16.19■□□□□ 0.18
IFT27-211ENST00000495555 UTRNP46939 3433 aa16.18■□□□□ 0.18
IFT27-211ENST00000495555 DNAJC10Q8IXB1 793 aa16.18■□□□□ 0.18
IFT27-211ENST00000495555 CCDC87Q9NVE4 849 aa16.18■□□□□ 0.18
IFT27-211ENST00000495555 NEFMP07197 916 aa16.17■□□□□ 0.18
IFT27-211ENST00000495555 IL17REQ8NFR9 667 aa16.17■□□□□ 0.18
IFT27-211ENST00000495555 RSPH6AQ9H0K4 717 aa16.17■□□□□ 0.18
IFT27-211ENST00000495555 PARP3Q9Y6F1 533 aa16.17■□□□□ 0.18
IFT27-211ENST00000495555 MRC1P22897 1456 aa16.16■□□□□ 0.18
IFT27-211ENST00000495555 ZPR1O75312 459 aa16.16■□□□□ 0.18
IFT27-211ENST00000495555 STARD3NLO95772 234 aa16.16■□□□□ 0.18
IFT27-211ENST00000495555 GYS1P13807 737 aa16.16■□□□□ 0.18
IFT27-211ENST00000495555 INTS5Q6P9B9 1019 aaKnown RBP16.16■□□□□ 0.18
IFT27-211ENST00000495555 RTF1Q92541 710 aaKnown RBP16.16■□□□□ 0.18
IFT27-211ENST00000495555 PHACTR3Q96KR7 559 aa16.16■□□□□ 0.18
IFT27-211ENST00000495555 TEX13AQ9BXU3 409 aaPredicted RBP16.16■□□□□ 0.18
IFT27-211ENST00000495555 CYP19A1P11511 503 aaPredicted RBP16.15■□□□□ 0.18
IFT27-211ENST00000495555 YBX3P16989 372 aaKnown RBP eCLIP16.15■□□□□ 0.18
IFT27-211ENST00000495555 COL5A3P25940 1745 aaPredicted RBP16.15■□□□□ 0.18
IFT27-211ENST00000495555 CHD4Q14839 1912 aa16.15■□□□□ 0.18
IFT27-211ENST00000495555 TGFB2P61812 414 aa16.14■□□□□ 0.17
IFT27-211ENST00000495555 ZNF790Q6PG37 636 aa16.14■□□□□ 0.17
IFT27-211ENST00000495555 PNNQ9H307 717 aaKnown RBP16.13■□□□□ 0.17
IFT27-211ENST00000495555 USP42Q9H9J4 1324 aaKnown RBP16.13■□□□□ 0.17
IFT27-211ENST00000495555 ADAMTS7Q9UKP4 1686 aa16.12■□□□□ 0.17
IFT27-211ENST00000495555 BTBD11A6QL63 1104 aa16.12■□□□□ 0.17
IFT27-211ENST00000495555 HTATSF1O43719 755 aaKnown RBP16.12■□□□□ 0.17
IFT27-211ENST00000495555 FMNL2Q96PY5 1086 aa16.12■□□□□ 0.17
IFT27-211ENST00000495555 MYH14Q7Z406 1995 aaKnown RBP16.12■□□□□ 0.17
IFT27-211ENST00000495555 A0A087WZG4 1122 aa16.11■□□□□ 0.17
IFT27-211ENST00000495555 RALBP1Q15311 655 aa16.11■□□□□ 0.17
IFT27-211ENST00000495555 NPM2Q86SE8 214 aaKnown RBP16.11■□□□□ 0.17
IFT27-211ENST00000495555 ZNF496Q96IT1 587 aaPredicted RBP16.11■□□□□ 0.17
IFT27-211ENST00000495555 SRP68Q9UHB9 627 aaKnown RBP16.11■□□□□ 0.17
IFT27-211ENST00000495555 SOS1Q07889 1333 aaPredicted RBP16.11■□□□□ 0.17
IFT27-211ENST00000495555 CICQ96RK0 1608 aaPredicted RBP16.11■□□□□ 0.17
IFT27-211ENST00000495555 CEMIPQ8WUJ3 1361 aa16.11■□□□□ 0.17
IFT27-211ENST00000495555 CANXP27824 592 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms