RNA–Protein interactions for RNA: ENST00000495465.6

RAPGEF3-214, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene RAPGEF3, Length 910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-214ENST00000495465 TUBGCP6Q96RT7 1819 aa19.86■□□□□ 0.77
RAPGEF3-214ENST00000495465 QSER1Q2KHR3 1735 aa19.85■□□□□ 0.77
RAPGEF3-214ENST00000495465 ITPK1Q13572 414 aa19.85■□□□□ 0.77
RAPGEF3-214ENST00000495465 MAP3K5Q99683 1374 aa19.84■□□□□ 0.77
RAPGEF3-214ENST00000495465 HMOX1P09601 288 aa19.84■□□□□ 0.77
RAPGEF3-214ENST00000495465 RBM42Q9BTD8 480 aaKnown RBP19.84■□□□□ 0.77
RAPGEF3-214ENST00000495465 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.83■□□□□ 0.77
RAPGEF3-214ENST00000495465 C5P01031 1676 aa19.83■□□□□ 0.76
RAPGEF3-214ENST00000495465 KDRP35968 1356 aa19.83■□□□□ 0.76
RAPGEF3-214ENST00000495465 GNPATO15228 680 aa19.82■□□□□ 0.76
RAPGEF3-214ENST00000495465 DIAPH1O60610 1272 aaKnown RBP19.82■□□□□ 0.76
RAPGEF3-214ENST00000495465 NLGN2Q8NFZ4 835 aa19.82■□□□□ 0.76
RAPGEF3-214ENST00000495465 KDM6AO15550 1401 aaPredicted RBP19.82■□□□□ 0.76
RAPGEF3-214ENST00000495465 GPR162Q16538 588 aa19.81■□□□□ 0.76
RAPGEF3-214ENST00000495465 PELP1Q8IZL8 1130 aaKnown RBP19.81■□□□□ 0.76
RAPGEF3-214ENST00000495465 NFATC2IPQ8NCF5 419 aa19.81■□□□□ 0.76
RAPGEF3-214ENST00000495465 SLC4A9Q96Q91 983 aa19.81■□□□□ 0.76
RAPGEF3-214ENST00000495465 C4BP0C0L5 1744 aa19.81■□□□□ 0.76
RAPGEF3-214ENST00000495465 SSFA2P28290 1259 aa19.8■□□□□ 0.76
RAPGEF3-214ENST00000495465 TAF1LQ8IZX4 1826 aa19.79■□□□□ 0.76
RAPGEF3-214ENST00000495465 PTCD1O75127 700 aaKnown RBP19.78■□□□□ 0.76
RAPGEF3-214ENST00000495465 AKAP4Q5JQC9 854 aa19.78■□□□□ 0.76
RAPGEF3-214ENST00000495465 NPC1L1Q9UHC9 1359 aa19.78■□□□□ 0.76
RAPGEF3-214ENST00000495465 U2SURPO15042 1029 aaKnown RBP19.76■□□□□ 0.75
RAPGEF3-214ENST00000495465 LGR6Q9HBX8 967 aa19.76■□□□□ 0.75
RAPGEF3-214ENST00000495465 MTHFSDQ2M296 383 aaKnown RBP19.75■□□□□ 0.75
RAPGEF3-214ENST00000495465 RTCBQ9Y3I0 505 aaKnown RBP19.75■□□□□ 0.75
RAPGEF3-214ENST00000495465 COL24A1Q17RW2 1714 aa19.75■□□□□ 0.75
RAPGEF3-214ENST00000495465 TRAPPC3LQ5T215 181 aa19.74■□□□□ 0.75
RAPGEF3-214ENST00000495465 RC3H1Q5TC82 1133 aaKnown RBP19.73■□□□□ 0.75
RAPGEF3-214ENST00000495465 CD2APQ9Y5K6 639 aa19.73■□□□□ 0.75
RAPGEF3-214ENST00000495465 RNMTO43148 476 aaKnown RBP19.72■□□□□ 0.75
RAPGEF3-214ENST00000495465 SLC52A2Q9HAB3 445 aa19.72■□□□□ 0.75
RAPGEF3-214ENST00000495465 UBR3Q6ZT12 1888 aa19.71■□□□□ 0.75
RAPGEF3-214ENST00000495465 ARHGEF1Q92888 912 aaKnown RBP19.71■□□□□ 0.75
RAPGEF3-214ENST00000495465 CNTNAP4Q9C0A0 1308 aa19.71■□□□□ 0.75
RAPGEF3-214ENST00000495465 RPS6KA4O75676 772 aa19.7■□□□□ 0.74
RAPGEF3-214ENST00000495465 YBX3P16989 372 aaKnown RBP eCLIP19.69■□□□□ 0.74
RAPGEF3-214ENST00000495465 RFC4P35249 363 aa19.69■□□□□ 0.74
RAPGEF3-214ENST00000495465 CRKLP46109 303 aaKnown RBP19.69■□□□□ 0.74
RAPGEF3-214ENST00000495465 SLC39A6Q13433 755 aa19.69■□□□□ 0.74
RAPGEF3-214ENST00000495465 CFAP53Q96M91 514 aa19.69■□□□□ 0.74
RAPGEF3-214ENST00000495465 COL3A1P02461 1466 aaPredicted RBP19.68■□□□□ 0.74
RAPGEF3-214ENST00000495465 MMP10P09238 476 aa19.68■□□□□ 0.74
RAPGEF3-214ENST00000495465 ADRA2BP18089 450 aa19.68■□□□□ 0.74
RAPGEF3-214ENST00000495465 ZNF784Q8NCA9 323 aaPredicted RBP19.68■□□□□ 0.74
RAPGEF3-214ENST00000495465 GRIN3BO60391 1043 aa19.66■□□□□ 0.74
RAPGEF3-214ENST00000495465 PPP2R1AP30153 589 aa19.66■□□□□ 0.74
RAPGEF3-214ENST00000495465 DNAJC10Q8IXB1 793 aa19.66■□□□□ 0.74
RAPGEF3-214ENST00000495465 NLGN1Q8N2Q7 840 aa19.66■□□□□ 0.74
RAPGEF3-214ENST00000495465 WWC3Q9ULE0 1092 aa19.66■□□□□ 0.74
RAPGEF3-214ENST00000495465 GYS1P13807 737 aa19.64■□□□□ 0.73
RAPGEF3-214ENST00000495465 GAS2L2Q8NHY3 880 aa19.64■□□□□ 0.73
RAPGEF3-214ENST00000495465 NUDCQ9Y266 331 aa19.64■□□□□ 0.73
RAPGEF3-214ENST00000495465 GNAT3A8MTJ3 354 aa19.63■□□□□ 0.73
RAPGEF3-214ENST00000495465 INTS5Q6P9B9 1019 aaKnown RBP19.63■□□□□ 0.73
RAPGEF3-214ENST00000495465 SRP68Q9UHB9 627 aaKnown RBP19.63■□□□□ 0.73
RAPGEF3-214ENST00000495465 SCN11AQ9UI33 1791 aa19.62■□□□□ 0.73
RAPGEF3-214ENST00000495465 ZNF831Q5JPB2 1677 aa19.62■□□□□ 0.73
RAPGEF3-214ENST00000495465 U2AF1L5P0DN76 240 aaPredicted RBP19.62■□□□□ 0.73
RAPGEF3-214ENST00000495465 PRKAR2BP31323 418 aa19.62■□□□□ 0.73
RAPGEF3-214ENST00000495465 U2AF1Q01081 240 aaKnown RBP eCLIP19.62■□□□□ 0.73
RAPGEF3-214ENST00000495465 IL17REQ8NFR9 667 aa19.62■□□□□ 0.73
RAPGEF3-214ENST00000495465 PHACTR3Q96KR7 559 aa19.62■□□□□ 0.73
RAPGEF3-214ENST00000495465 RSPH6AQ9H0K4 717 aa19.62■□□□□ 0.73
RAPGEF3-214ENST00000495465 TEFQ10587 303 aa19.61■□□□□ 0.73
RAPGEF3-214ENST00000495465 CCDC87Q9NVE4 849 aa19.61■□□□□ 0.73
RAPGEF3-214ENST00000495465 CYP19A1P11511 503 aaPredicted RBP19.6■□□□□ 0.73
RAPGEF3-214ENST00000495465 TTC5Q8N0Z6 440 aa19.6■□□□□ 0.73
RAPGEF3-214ENST00000495465 PARP3Q9Y6F1 533 aa19.6■□□□□ 0.73
RAPGEF3-214ENST00000495465 MYH14Q7Z406 1995 aaKnown RBP19.6■□□□□ 0.73
RAPGEF3-214ENST00000495465 MRC1P22897 1456 aa19.6■□□□□ 0.73
RAPGEF3-214ENST00000495465 COL5A3P25940 1745 aaPredicted RBP19.59■□□□□ 0.73
RAPGEF3-214ENST00000495465 FKBP8Q14318 412 aa19.59■□□□□ 0.73
RAPGEF3-214ENST00000495465 CHD4Q14839 1912 aa19.58■□□□□ 0.72
RAPGEF3-214ENST00000495465 USP42Q9H9J4 1324 aaKnown RBP19.57■□□□□ 0.72
RAPGEF3-214ENST00000495465 ZPR1O75312 459 aa19.57■□□□□ 0.72
RAPGEF3-214ENST00000495465 VSIG10Q8N0Z9 540 aa19.57■□□□□ 0.72
RAPGEF3-214ENST00000495465 SOS1Q07889 1333 aaPredicted RBP19.56■□□□□ 0.72
RAPGEF3-214ENST00000495465 A0A0G2JLW4 131 aa19.56■□□□□ 0.72
RAPGEF3-214ENST00000495465 ZBTB1Q9Y2K1 713 aa19.56■□□□□ 0.72
RAPGEF3-214ENST00000495465 TJP1Q07157 1748 aa19.56■□□□□ 0.72
RAPGEF3-214ENST00000495465 KCPQ6ZWJ8 1503 aa19.56■□□□□ 0.72
RAPGEF3-214ENST00000495465 CICQ96RK0 1608 aaPredicted RBP19.55■□□□□ 0.72
RAPGEF3-214ENST00000495465 FCHSD2O94868 740 aa19.55■□□□□ 0.72
RAPGEF3-214ENST00000495465 TGFB2P61812 414 aa19.55■□□□□ 0.72
RAPGEF3-214ENST00000495465 USPL1Q5W0Q7 1092 aa19.55■□□□□ 0.72
RAPGEF3-214ENST00000495465 ZNF790Q6PG37 636 aa19.55■□□□□ 0.72
RAPGEF3-214ENST00000495465 ZNF496Q96IT1 587 aaPredicted RBP19.55■□□□□ 0.72
RAPGEF3-214ENST00000495465 STARD3NLO95772 234 aa19.54■□□□□ 0.72
RAPGEF3-214ENST00000495465 CANXP27824 592 aaKnown RBP19.54■□□□□ 0.72
RAPGEF3-214ENST00000495465 ADAMTS7Q9UKP4 1686 aa19.53■□□□□ 0.72
RAPGEF3-214ENST00000495465 DPEP1P16444 411 aa19.53■□□□□ 0.72
RAPGEF3-214ENST00000495465 DDR1Q08345 913 aa19.53■□□□□ 0.72
RAPGEF3-214ENST00000495465 BTBD11A6QL63 1104 aa19.52■□□□□ 0.72
RAPGEF3-214ENST00000495465 KCNQ3O43525 872 aa19.52■□□□□ 0.72
RAPGEF3-214ENST00000495465 MCM10Q7L590 875 aa19.52■□□□□ 0.72
RAPGEF3-214ENST00000495465 RTF1Q92541 710 aaKnown RBP19.52■□□□□ 0.72
RAPGEF3-214ENST00000495465 PXDNLA1KZ92 1463 aa19.52■□□□□ 0.72
RAPGEF3-214ENST00000495465 C10orf71Q711Q0 1435 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms