RNA–Protein interactions for RNA: ENST00000495460.1

NUP58-214, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-214ENST00000495460 AK7Q96M32 723 aa20.79■□□□□ 0.92
NUP58-214ENST00000495460 EYA1Q99502 592 aa20.79■□□□□ 0.92
NUP58-214ENST00000495460 TOGARAM1Q9Y4F4 1720 aa20.78■□□□□ 0.92
NUP58-214ENST00000495460 MAP2P11137 1827 aaKnown RBP20.78■□□□□ 0.92
NUP58-214ENST00000495460 LOC102724428A0A0B4J2F2 783 aa20.78■□□□□ 0.92
NUP58-214ENST00000495460 ZBTB22O15209 634 aa20.78■□□□□ 0.92
NUP58-214ENST00000495460 SIK1P57059 783 aa20.78■□□□□ 0.92
NUP58-214ENST00000495460 POLKQ9UBT6 870 aa20.78■□□□□ 0.92
NUP58-214ENST00000495460 UBR3Q6ZT12 1888 aa20.77■□□□□ 0.92
NUP58-214ENST00000495460 PELP1Q8IZL8 1130 aaKnown RBP20.76■□□□□ 0.91
NUP58-214ENST00000495460 TMOD3Q9NYL9 352 aa20.76■□□□□ 0.91
NUP58-214ENST00000495460 SENP3-EIF4A1A0A087X0R7 540 aa20.75■□□□□ 0.91
NUP58-214ENST00000495460 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.75■□□□□ 0.91
NUP58-214ENST00000495460 PHKG2P15735 406 aa20.75■□□□□ 0.91
NUP58-214ENST00000495460 ZNF831Q5JPB2 1677 aa20.74■□□□□ 0.91
NUP58-214ENST00000495460 ERVV-2B6SEH9 535 aa20.74■□□□□ 0.91
NUP58-214ENST00000495460 PPM1GO15355 546 aaPredicted RBP20.73■□□□□ 0.91
NUP58-214ENST00000495460 MSL1Q68DK7 614 aa20.73■□□□□ 0.91
NUP58-214ENST00000495460 HSP90AB1P08238 724 aaKnown RBP20.72■□□□□ 0.91
NUP58-214ENST00000495460 RC3H1Q5TC82 1133 aaKnown RBP20.71■□□□□ 0.91
NUP58-214ENST00000495460 AMIGO3Q86WK7 504 aa20.71■□□□□ 0.91
NUP58-214ENST00000495460 LINC00116Q8NCU8 138 aa20.71■□□□□ 0.91
NUP58-214ENST00000495460 ADCY9O60503 1353 aa20.71■□□□□ 0.91
NUP58-214ENST00000495460 EIF4A2Q14240 407 aaKnown RBP20.7■□□□□ 0.9
NUP58-214ENST00000495460 DCAF5Q96JK2 942 aa20.7■□□□□ 0.9
NUP58-214ENST00000495460 ATG3Q9NT62 314 aa20.7■□□□□ 0.9
NUP58-214ENST00000495460 ASAP1Q9ULH1 1129 aa20.7■□□□□ 0.9
NUP58-214ENST00000495460 IGSF1Q8N6C5 1336 aa20.7■□□□□ 0.9
NUP58-214ENST00000495460 ATP6V1AP38606 617 aa20.69■□□□□ 0.9
NUP58-214ENST00000495460 ITPK1Q13572 414 aa20.68■□□□□ 0.9
NUP58-214ENST00000495460 AMOTQ4VCS5 1084 aa20.68■□□□□ 0.9
NUP58-214ENST00000495460 NLGN1Q8N2Q7 840 aa20.68■□□□□ 0.9
NUP58-214ENST00000495460 ZBTB12Q9Y330 459 aaPredicted RBP20.68■□□□□ 0.9
NUP58-214ENST00000495460 TGFB2P61812 414 aa20.67■□□□□ 0.9
NUP58-214ENST00000495460 ATP10DQ9P241 1426 aa20.67■□□□□ 0.9
NUP58-214ENST00000495460 KDRP35968 1356 aa20.66■□□□□ 0.9
NUP58-214ENST00000495460 GNPATO15228 680 aa20.65■□□□□ 0.9
NUP58-214ENST00000495460 PLEKHO1Q53GL0 409 aaPredicted RBP20.65■□□□□ 0.9
NUP58-214ENST00000495460 TRAPPC3LQ5T215 181 aa20.65■□□□□ 0.9
NUP58-214ENST00000495460 GPBP1L1Q9HC44 474 aaPredicted RBP20.65■□□□□ 0.9
NUP58-214ENST00000495460 KIF13BQ9NQT8 1826 aa20.64■□□□□ 0.9
NUP58-214ENST00000495460 PHF14O94880 888 aa20.64■□□□□ 0.89
NUP58-214ENST00000495460 REM2Q8IYK8 340 aaPredicted RBP20.64■□□□□ 0.89
NUP58-214ENST00000495460 RTCBQ9Y3I0 505 aaKnown RBP20.64■□□□□ 0.89
NUP58-214ENST00000495460 CNTNAP4Q9C0A0 1308 aa20.63■□□□□ 0.89
NUP58-214ENST00000495460 EIF4G2P78344 907 aaKnown RBP eCLIP20.63■□□□□ 0.89
NUP58-214ENST00000495460 CICQ96RK0 1608 aaPredicted RBP20.62■□□□□ 0.89
NUP58-214ENST00000495460 RPS6KA4O75676 772 aa20.61■□□□□ 0.89
NUP58-214ENST00000495460 MMP10P09238 476 aa20.6■□□□□ 0.89
NUP58-214ENST00000495460 SLC4A9Q96Q91 983 aa20.6■□□□□ 0.89
NUP58-214ENST00000495460 PANK3Q9H999 370 aa20.6■□□□□ 0.89
NUP58-214ENST00000495460 ARHGEF1Q92888 912 aaKnown RBP20.58■□□□□ 0.89
NUP58-214ENST00000495460 COL5A3P25940 1745 aaPredicted RBP20.58■□□□□ 0.88
NUP58-214ENST00000495460 SMIM5Q71RC9 77 aa20.57■□□□□ 0.88
NUP58-214ENST00000495460 GYS1P13807 737 aa20.56■□□□□ 0.88
NUP58-214ENST00000495460 HSPA6P17066 643 aa20.56■□□□□ 0.88
NUP58-214ENST00000495460 RFC4P35249 363 aa20.56■□□□□ 0.88
NUP58-214ENST00000495460 TNNT2P45379 298 aaPredicted RBP20.56■□□□□ 0.88
NUP58-214ENST00000495460 MTHFSP49914 203 aa20.56■□□□□ 0.88
NUP58-214ENST00000495460 CABP4P57796 275 aa20.56■□□□□ 0.88
NUP58-214ENST00000495460 PXDNLA1KZ92 1463 aa20.56■□□□□ 0.88
NUP58-214ENST00000495460 KDM6AO15550 1401 aaPredicted RBP20.55■□□□□ 0.88
NUP58-214ENST00000495460 C10orf71Q711Q0 1435 aa20.55■□□□□ 0.88
NUP58-214ENST00000495460 ZNF530Q6P9A1 599 aaPredicted RBP20.55■□□□□ 0.88
NUP58-214ENST00000495460 CCDC87Q9NVE4 849 aa20.55■□□□□ 0.88
NUP58-214ENST00000495460 KIAA1551Q9HCM1 1747 aa20.54■□□□□ 0.88
NUP58-214ENST00000495460 C1orf141Q5JVX7 400 aa20.54■□□□□ 0.88
NUP58-214ENST00000495460 HSPA5P11021 654 aaKnown RBP20.53■□□□□ 0.88
NUP58-214ENST00000495460 MORC1Q86VD1 984 aa20.53■□□□□ 0.88
NUP58-214ENST00000495460 PIP4P2Q8N4L2 257 aa20.52■□□□□ 0.88
NUP58-214ENST00000495460 NFATC2IPQ8NCF5 419 aa20.52■□□□□ 0.88
NUP58-214ENST00000495460 PARP3Q9Y6F1 533 aa20.52■□□□□ 0.88
NUP58-214ENST00000495460 MYH14Q7Z406 1995 aaKnown RBP20.52■□□□□ 0.87
NUP58-214ENST00000495460 C4AP0C0L4 1744 aa20.51■□□□□ 0.87
NUP58-214ENST00000495460 KIF3CO14782 793 aa20.51■□□□□ 0.87
NUP58-214ENST00000495460 IL13P35225 146 aa20.51■□□□□ 0.87
NUP58-214ENST00000495460 KNSTRNQ9Y448 316 aa20.51■□□□□ 0.87
NUP58-214ENST00000495460 A0A0G2JLW4 131 aa20.49■□□□□ 0.87
NUP58-214ENST00000495460 KCNA3P22001 575 aa20.49■□□□□ 0.87
NUP58-214ENST00000495460 AKAP4Q5JQC9 854 aa20.49■□□□□ 0.87
NUP58-214ENST00000495460 IFFO2Q5TF58 517 aa20.49■□□□□ 0.87
NUP58-214ENST00000495460 SULT6B1Q6IMI4 303 aa20.49■□□□□ 0.87
NUP58-214ENST00000495460 POLR3GLQ9BT43 218 aa20.49■□□□□ 0.87
NUP58-214ENST00000495460 BRCA1P38398 1863 aaKnown RBP20.49■□□□□ 0.87
NUP58-214ENST00000495460 CRKLP46109 303 aaKnown RBP20.48■□□□□ 0.87
NUP58-214ENST00000495460 TOMM70O94826 608 aa20.47■□□□□ 0.87
NUP58-214ENST00000495460 DPEP1P16444 411 aa20.47■□□□□ 0.87
NUP58-214ENST00000495460 AEBP1Q8IUX7 1158 aa20.47■□□□□ 0.87
NUP58-214ENST00000495460 PIM2Q9P1W9 311 aa20.47■□□□□ 0.87
NUP58-214ENST00000495460 BCS1LQ9Y276 419 aa20.47■□□□□ 0.87
NUP58-214ENST00000495460 USP42Q9H9J4 1324 aaKnown RBP20.47■□□□□ 0.87
NUP58-214ENST00000495460 SCN11AQ9UI33 1791 aa20.46■□□□□ 0.87
NUP58-214ENST00000495460 ARFGEF1Q9Y6D6 1849 aa20.46■□□□□ 0.87
NUP58-214ENST00000495460 PTCD1O75127 700 aaKnown RBP20.46■□□□□ 0.87
NUP58-214ENST00000495460 TM4SF1P30408 202 aa20.46■□□□□ 0.87
NUP58-214ENST00000495460 AMER1Q5JTC6 1135 aaPredicted RBP20.46■□□□□ 0.87
NUP58-214ENST00000495460 N4BP2Q86UW6 1770 aaPredicted RBP20.46■□□□□ 0.87
NUP58-214ENST00000495460 PITPNM1O00562 1244 aa20.45■□□□□ 0.86
NUP58-214ENST00000495460 INTS5Q6P9B9 1019 aaKnown RBP20.45■□□□□ 0.86
NUP58-214ENST00000495460 VSIG10Q8N0Z9 540 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms