RNA–Protein interactions for RNA: ENST00000495457.1

RPRD1B-206, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-206ENST00000495457 C4BP0C0L5 1744 aa19.28■□□□□ 0.68
RPRD1B-206ENST00000495457 CABP4P57796 275 aa19.28■□□□□ 0.68
RPRD1B-206ENST00000495457 KLHL34Q8N239 644 aa19.28■□□□□ 0.68
RPRD1B-206ENST00000495457 TAF1LQ8IZX4 1826 aa19.28■□□□□ 0.68
RPRD1B-206ENST00000495457 DCAF8L1A6NGE4 600 aa19.27■□□□□ 0.68
RPRD1B-206ENST00000495457 PHF14O94880 888 aa19.27■□□□□ 0.68
RPRD1B-206ENST00000495457 HMGB2P26583 209 aaKnown RBP19.27■□□□□ 0.68
RPRD1B-206ENST00000495457 SLC4A9Q96Q91 983 aa19.27■□□□□ 0.68
RPRD1B-206ENST00000495457 COL3A1P02461 1466 aaPredicted RBP19.27■□□□□ 0.67
RPRD1B-206ENST00000495457 FLAD1Q8NFF5 587 aa19.26■□□□□ 0.67
RPRD1B-206ENST00000495457 MAP3K5Q99683 1374 aa19.25■□□□□ 0.67
RPRD1B-206ENST00000495457 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.25■□□□□ 0.67
RPRD1B-206ENST00000495457 NFATC2IPQ8NCF5 419 aa19.25■□□□□ 0.67
RPRD1B-206ENST00000495457 RBM42Q9BTD8 480 aaKnown RBP19.25■□□□□ 0.67
RPRD1B-206ENST00000495457 COL24A1Q17RW2 1714 aa19.25■□□□□ 0.67
RPRD1B-206ENST00000495457 AKAP4Q5JQC9 854 aa19.24■□□□□ 0.67
RPRD1B-206ENST00000495457 U2SURPO15042 1029 aaKnown RBP19.23■□□□□ 0.67
RPRD1B-206ENST00000495457 GNPATO15228 680 aa19.23■□□□□ 0.67
RPRD1B-206ENST00000495457 MTHFSDQ2M296 383 aaKnown RBP19.23■□□□□ 0.67
RPRD1B-206ENST00000495457 LGR6Q9HBX8 967 aa19.23■□□□□ 0.67
RPRD1B-206ENST00000495457 SSFA2P28290 1259 aa19.22■□□□□ 0.67
RPRD1B-206ENST00000495457 PTCD1O75127 700 aaKnown RBP19.21■□□□□ 0.67
RPRD1B-206ENST00000495457 NLGN2Q8NFZ4 835 aa19.21■□□□□ 0.67
RPRD1B-206ENST00000495457 YY1P25490 414 aa19.2■□□□□ 0.66
RPRD1B-206ENST00000495457 UBR3Q6ZT12 1888 aa19.2■□□□□ 0.66
RPRD1B-206ENST00000495457 RNMTO43148 476 aaKnown RBP19.19■□□□□ 0.66
RPRD1B-206ENST00000495457 PPP2R1AP30153 589 aa19.19■□□□□ 0.66
RPRD1B-206ENST00000495457 SLC52A2Q9HAB3 445 aa19.19■□□□□ 0.66
RPRD1B-206ENST00000495457 UTRNP46939 3433 aa19.18■□□□□ 0.66
RPRD1B-206ENST00000495457 RTCBQ9Y3I0 505 aaKnown RBP19.17■□□□□ 0.66
RPRD1B-206ENST00000495457 CFAP53Q96M91 514 aa19.16■□□□□ 0.66
RPRD1B-206ENST00000495457 CNTNAP4Q9C0A0 1308 aa19.16■□□□□ 0.66
RPRD1B-206ENST00000495457 SCN11AQ9UI33 1791 aa19.16■□□□□ 0.66
RPRD1B-206ENST00000495457 SLC39A6Q13433 755 aa19.15■□□□□ 0.66
RPRD1B-206ENST00000495457 RC3H1Q5TC82 1133 aaKnown RBP19.15■□□□□ 0.66
RPRD1B-206ENST00000495457 MRC1P22897 1456 aa19.15■□□□□ 0.66
RPRD1B-206ENST00000495457 ZNF831Q5JPB2 1677 aa19.14■□□□□ 0.66
RPRD1B-206ENST00000495457 GPR162Q16538 588 aa19.14■□□□□ 0.65
RPRD1B-206ENST00000495457 TRAPPC3LQ5T215 181 aa19.14■□□□□ 0.65
RPRD1B-206ENST00000495457 PELP1Q8IZL8 1130 aaKnown RBP19.14■□□□□ 0.65
RPRD1B-206ENST00000495457 RPS6KA4O75676 772 aa19.13■□□□□ 0.65
RPRD1B-206ENST00000495457 ARHGEF1Q92888 912 aaKnown RBP19.13■□□□□ 0.65
RPRD1B-206ENST00000495457 PHACTR3Q96KR7 559 aa19.13■□□□□ 0.65
RPRD1B-206ENST00000495457 RSPH6AQ9H0K4 717 aa19.13■□□□□ 0.65
RPRD1B-206ENST00000495457 COL5A3P25940 1745 aaPredicted RBP19.13■□□□□ 0.65
RPRD1B-206ENST00000495457 PRKAR2BP31323 418 aa19.12■□□□□ 0.65
RPRD1B-206ENST00000495457 CRKLP46109 303 aaKnown RBP19.12■□□□□ 0.65
RPRD1B-206ENST00000495457 GAS2L2Q8NHY3 880 aa19.12■□□□□ 0.65
RPRD1B-206ENST00000495457 ADAMTS7Q9UKP4 1686 aa19.11■□□□□ 0.65
RPRD1B-206ENST00000495457 DNAJC10Q8IXB1 793 aa19.11■□□□□ 0.65
RPRD1B-206ENST00000495457 IL17REQ8NFR9 667 aa19.11■□□□□ 0.65
RPRD1B-206ENST00000495457 NUDCQ9Y266 331 aa19.11■□□□□ 0.65
RPRD1B-206ENST00000495457 CD2APQ9Y5K6 639 aa19.11■□□□□ 0.65
RPRD1B-206ENST00000495457 GNAT3A8MTJ3 354 aa19.1■□□□□ 0.65
RPRD1B-206ENST00000495457 U2AF1L5P0DN76 240 aaPredicted RBP19.1■□□□□ 0.65
RPRD1B-206ENST00000495457 ADRA2BP18089 450 aa19.1■□□□□ 0.65
RPRD1B-206ENST00000495457 U2AF1Q01081 240 aaKnown RBP eCLIP19.1■□□□□ 0.65
RPRD1B-206ENST00000495457 TJP1Q07157 1748 aa19.09■□□□□ 0.65
RPRD1B-206ENST00000495457 MMP10P09238 476 aa19.09■□□□□ 0.65
RPRD1B-206ENST00000495457 YBX3P16989 372 aaKnown RBP eCLIP19.09■□□□□ 0.65
RPRD1B-206ENST00000495457 RFC4P35249 363 aa19.09■□□□□ 0.65
RPRD1B-206ENST00000495457 INTS5Q6P9B9 1019 aaKnown RBP19.09■□□□□ 0.65
RPRD1B-206ENST00000495457 KCPQ6ZWJ8 1503 aa19.09■□□□□ 0.65
RPRD1B-206ENST00000495457 GYS1P13807 737 aa19.08■□□□□ 0.64
RPRD1B-206ENST00000495457 MYH14Q7Z406 1995 aaKnown RBP19.08■□□□□ 0.64
RPRD1B-206ENST00000495457 GOLGB1Q14789 3259 aaKnown RBP19.07■□□□□ 0.64
RPRD1B-206ENST00000495457 CYP19A1P11511 503 aaPredicted RBP19.06■□□□□ 0.64
RPRD1B-206ENST00000495457 TEFQ10587 303 aa19.06■□□□□ 0.64
RPRD1B-206ENST00000495457 NLGN1Q8N2Q7 840 aa19.06■□□□□ 0.64
RPRD1B-206ENST00000495457 SRP68Q9UHB9 627 aaKnown RBP19.06■□□□□ 0.64
RPRD1B-206ENST00000495457 CICQ96RK0 1608 aaPredicted RBP19.06■□□□□ 0.64
RPRD1B-206ENST00000495457 CCDC87Q9NVE4 849 aa19.05■□□□□ 0.64
RPRD1B-206ENST00000495457 WWC3Q9ULE0 1092 aa19.05■□□□□ 0.64
RPRD1B-206ENST00000495457 FCHSD2O94868 740 aa19.04■□□□□ 0.64
RPRD1B-206ENST00000495457 TTC5Q8N0Z6 440 aa19.04■□□□□ 0.64
RPRD1B-206ENST00000495457 CEMIPQ8WUJ3 1361 aa19.04■□□□□ 0.64
RPRD1B-206ENST00000495457 USP42Q9H9J4 1324 aaKnown RBP19.03■□□□□ 0.64
RPRD1B-206ENST00000495457 VIRMAQ69YN4 1812 aaKnown RBP19.03■□□□□ 0.64
RPRD1B-206ENST00000495457 ZNF790Q6PG37 636 aa19.03■□□□□ 0.64
RPRD1B-206ENST00000495457 ZNF496Q96IT1 587 aaPredicted RBP19.03■□□□□ 0.64
RPRD1B-206ENST00000495457 ZBTB1Q9Y2K1 713 aa19.03■□□□□ 0.64
RPRD1B-206ENST00000495457 C4AP0C0L4 1744 aa19.03■□□□□ 0.64
RPRD1B-206ENST00000495457 SOS1Q07889 1333 aaPredicted RBP19.02■□□□□ 0.64
RPRD1B-206ENST00000495457 FKBP8Q14318 412 aa19.02■□□□□ 0.64
RPRD1B-206ENST00000495457 VSIG10Q8N0Z9 540 aa19.02■□□□□ 0.64
RPRD1B-206ENST00000495457 GRIN3BO60391 1043 aa19.01■□□□□ 0.63
RPRD1B-206ENST00000495457 DDX10Q13206 875 aaKnown RBP19.01■□□□□ 0.63
RPRD1B-206ENST00000495457 MCM10Q7L590 875 aa19.01■□□□□ 0.63
RPRD1B-206ENST00000495457 ZNF784Q8NCA9 323 aaPredicted RBP19.01■□□□□ 0.63
RPRD1B-206ENST00000495457 KCNQ3O43525 872 aa19■□□□□ 0.63
RPRD1B-206ENST00000495457 UBR2Q8IWV8 1755 aa18.99■□□□□ 0.63
RPRD1B-206ENST00000495457 HEG1Q9ULI3 1381 aa18.99■□□□□ 0.63
RPRD1B-206ENST00000495457 DCTN1Q14203 1278 aa18.99■□□□□ 0.63
RPRD1B-206ENST00000495457 USPL1Q5W0Q7 1092 aa18.99■□□□□ 0.63
RPRD1B-206ENST00000495457 PARP3Q9Y6F1 533 aa18.99■□□□□ 0.63
RPRD1B-206ENST00000495457 C10orf71Q711Q0 1435 aa18.99■□□□□ 0.63
RPRD1B-206ENST00000495457 COL15A1P39059 1388 aa18.98■□□□□ 0.63
RPRD1B-206ENST00000495457 BTBD11A6QL63 1104 aa18.98■□□□□ 0.63
RPRD1B-206ENST00000495457 CANXP27824 592 aaKnown RBP18.98■□□□□ 0.63
RPRD1B-206ENST00000495457 DDR1Q08345 913 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms