RNA–Protein interactions for RNA: ENST00000495428.5

CMC1-211, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 608 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-211ENST00000495428 GTF2IP78347 998 aa6.83□□□□□ -1.32
CMC1-211ENST00000495428 GNASQ5JWF2 1037 aa6.83□□□□□ -1.32
CMC1-211ENST00000495428 USP17L2Q6R6M4 530 aa6.83□□□□□ -1.32
CMC1-211ENST00000495428 USP17L1Q7RTZ2 530 aa6.83□□□□□ -1.32
CMC1-211ENST00000495428 DEPDC4Q8N2C3 294 aa6.83□□□□□ -1.32
CMC1-211ENST00000495428 CALR3Q96L12 384 aaKnown RBP6.83□□□□□ -1.32
CMC1-211ENST00000495428 DYRK1BQ9Y463 629 aa6.83□□□□□ -1.32
CMC1-211ENST00000495428 TLR1Q15399 786 aa6.82□□□□□ -1.32
CMC1-211ENST00000495428 TMEM214Q6NUQ4 689 aaKnown RBP6.82□□□□□ -1.32
CMC1-211ENST00000495428 TRIM50Q86XT4 487 aa6.82□□□□□ -1.32
CMC1-211ENST00000495428 TMEM229AB2RXF0 380 aa6.81□□□□□ -1.32
CMC1-211ENST00000495428 SV2AQ7L0J3 742 aa6.81□□□□□ -1.32
CMC1-211ENST00000495428 PPARGC1BQ86YN6 1023 aaKnown RBP6.81□□□□□ -1.32
CMC1-211ENST00000495428 VWA5B2Q8N398 1253 aa6.81□□□□□ -1.32
CMC1-211ENST00000495428 SLC4A9Q96Q91 983 aa6.81□□□□□ -1.32
CMC1-211ENST00000495428 TIMMDC1Q9NPL8 285 aa6.81□□□□□ -1.32
CMC1-211ENST00000495428 GTF3C3Q9Y5Q9 886 aa6.81□□□□□ -1.32
CMC1-211ENST00000495428 CDC14CA4D256 554 aa6.8□□□□□ -1.32
CMC1-211ENST00000495428 SMTNP53814 917 aa6.8□□□□□ -1.32
CMC1-211ENST00000495428 PSME1Q06323 249 aa6.8□□□□□ -1.32
CMC1-211ENST00000495428 GPR161Q8N6U8 529 aaKnown RBP6.8□□□□□ -1.32
CMC1-211ENST00000495428 RHBDD1Q8TEB9 315 aa6.8□□□□□ -1.32
CMC1-211ENST00000495428 GMCL1Q96IK5 515 aa6.8□□□□□ -1.32
CMC1-211ENST00000495428 CUEDC1Q9NWM3 386 aaPredicted RBP6.8□□□□□ -1.32
CMC1-211ENST00000495428 TFIP11Q9UBB9 837 aaKnown RBP6.8□□□□□ -1.32
CMC1-211ENST00000495428 A0A1B0GTH6 734 aa6.79□□□□□ -1.32
CMC1-211ENST00000495428 H7C1W4 665 aa6.79□□□□□ -1.32
CMC1-211ENST00000495428 BACH1O14867 736 aa6.79□□□□□ -1.32
CMC1-211ENST00000495428 F11P03951 625 aa6.79□□□□□ -1.32
CMC1-211ENST00000495428 ATP1A2P50993 1020 aa6.79□□□□□ -1.32
CMC1-211ENST00000495428 C4orf17Q53FE4 359 aa6.79□□□□□ -1.32
CMC1-211ENST00000495428 RIPOR1Q6ZS17 1223 aa6.79□□□□□ -1.32
CMC1-211ENST00000495428 TRIM22Q8IYM9 498 aa6.79□□□□□ -1.32
CMC1-211ENST00000495428 MKRN1Q9UHC7 482 aaKnown RBP6.79□□□□□ -1.32
CMC1-211ENST00000495428 SERTAD1Q9UHV2 236 aa6.79□□□□□ -1.32
CMC1-211ENST00000495428 ZNF777Q9ULD5 760 aaPredicted RBP6.79□□□□□ -1.32
CMC1-211ENST00000495428 MAFBQ9Y5Q3 323 aaPredicted RBP6.79□□□□□ -1.32
CMC1-211ENST00000495428 PALM3A6NDB9 673 aaPredicted RBP6.78□□□□□ -1.32
CMC1-211ENST00000495428 PHKA2P46019 1235 aa6.78□□□□□ -1.32
CMC1-211ENST00000495428 KCNMA1Q12791 1236 aa6.78□□□□□ -1.32
CMC1-211ENST00000495428 MTFR1Q15390 333 aa6.78□□□□□ -1.32
CMC1-211ENST00000495428 GAS2L1Q99501 681 aaPredicted RBP6.78□□□□□ -1.32
CMC1-211ENST00000495428 PPP1R12CQ9BZL4 782 aa6.78□□□□□ -1.32
CMC1-211ENST00000495428 A6NJY4 79 aa6.77□□□□□ -1.33
CMC1-211ENST00000495428 CDK2AP1O14519 115 aa6.77□□□□□ -1.33
CMC1-211ENST00000495428 ZBTB7BO15156 539 aaPredicted RBP6.77□□□□□ -1.33
CMC1-211ENST00000495428 CLDN10P78369 228 aa6.77□□□□□ -1.33
CMC1-211ENST00000495428 CCDC102BQ68D86 513 aa6.77□□□□□ -1.33
CMC1-211ENST00000495428 LARGE2Q8N3Y3 721 aa6.77□□□□□ -1.33
CMC1-211ENST00000495428 OGFOD1Q8N543 542 aa6.77□□□□□ -1.33
CMC1-211ENST00000495428 TPCN2Q8NHX9 752 aa6.77□□□□□ -1.33
CMC1-211ENST00000495428 ZNF837Q96EG3 531 aaPredicted RBP6.77□□□□□ -1.33
CMC1-211ENST00000495428 COL25A1Q9BXS0 654 aaPredicted RBP6.77□□□□□ -1.33
CMC1-211ENST00000495428 NIFKQ9BYG3 293 aaKnown RBP6.77□□□□□ -1.33
CMC1-211ENST00000495428 ZMYND15Q9H091 742 aa6.77□□□□□ -1.33
CMC1-211ENST00000495428 DNAAF2Q9NVR5 837 aaKnown RBP6.77□□□□□ -1.33
CMC1-211ENST00000495428 ZNF358Q9NW07 568 aa6.77□□□□□ -1.33
CMC1-211ENST00000495428 KRT76Q01546 638 aa6.76□□□□□ -1.33
CMC1-211ENST00000495428 DBN1Q16643 649 aa6.76□□□□□ -1.33
CMC1-211ENST00000495428 FOXR1Q6PIV2 292 aa6.76□□□□□ -1.33
CMC1-211ENST00000495428 KCTD17Q8N5Z5 321 aa6.76□□□□□ -1.33
CMC1-211ENST00000495428 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.76□□□□□ -1.33
CMC1-211ENST00000495428 IQSEC3Q9UPP2 1182 aaPredicted RBP6.76□□□□□ -1.33
CMC1-211ENST00000495428 KIAA1024Q9UPX6 916 aa6.76□□□□□ -1.33
CMC1-211ENST00000495428 PLA2G4AP47712 749 aa6.75□□□□□ -1.33
CMC1-211ENST00000495428 RNFT1Q5M7Z0 435 aa6.75□□□□□ -1.33
CMC1-211ENST00000495428 ZNF295-AS1Q8N0V1 137 aa6.75□□□□□ -1.33
CMC1-211ENST00000495428 SIX5Q8N196 739 aa6.75□□□□□ -1.33
CMC1-211ENST00000495428 CNTNAP3BQ96NU0 1288 aa6.75□□□□□ -1.33
CMC1-211ENST00000495428 CNTNAP3Q9BZ76 1288 aa6.75□□□□□ -1.33
CMC1-211ENST00000495428 GPAMQ9HCL2 828 aa6.75□□□□□ -1.33
CMC1-211ENST00000495428 SCHIP1Q9P0W5 487 aaPredicted RBP6.75□□□□□ -1.33
CMC1-211ENST00000495428 RASA1P20936 1047 aa6.74□□□□□ -1.33
CMC1-211ENST00000495428 MSX1P28360 303 aa6.74□□□□□ -1.33
CMC1-211ENST00000495428 EPHA4P54764 986 aa6.74□□□□□ -1.33
CMC1-211ENST00000495428 LBRQ14739 615 aaKnown RBP6.74□□□□□ -1.33
CMC1-211ENST00000495428 C1orf216Q8TAB5 229 aa6.74□□□□□ -1.33
CMC1-211ENST00000495428 GTPBP3Q969Y2 492 aaKnown RBP6.74□□□□□ -1.33
CMC1-211ENST00000495428 NUCKS1Q9H1E3 243 aaKnown RBP6.74□□□□□ -1.33
CMC1-211ENST00000495428 RBM19Q9Y4C8 960 aaKnown RBP6.74□□□□□ -1.33
CMC1-211ENST00000495428 USP3Q9Y6I4 520 aa6.74□□□□□ -1.33
CMC1-211ENST00000495428 M0R2N6 131 aa6.73□□□□□ -1.33
CMC1-211ENST00000495428 CSB-PGBD3P0DP91 1061 aa6.73□□□□□ -1.33
CMC1-211ENST00000495428 LMOD1P29536 600 aaPredicted RBP6.73□□□□□ -1.33
CMC1-211ENST00000495428 FOXK2Q01167 660 aa6.73□□□□□ -1.33
CMC1-211ENST00000495428 KANK4Q5T7N3 995 aaPredicted RBP6.73□□□□□ -1.33
CMC1-211ENST00000495428 PGBD3Q8N328 593 aa6.73□□□□□ -1.33
CMC1-211ENST00000495428 ZNF594Q96JF6 807 aaPredicted RBP6.73□□□□□ -1.33
CMC1-211ENST00000495428 TRERF1Q96PN7 1200 aa6.73□□□□□ -1.33
CMC1-211ENST00000495428 DKK1O94907 266 aa6.72□□□□□ -1.33
CMC1-211ENST00000495428 GAS6Q14393 721 aa6.72□□□□□ -1.33
CMC1-211ENST00000495428 NBPF1Q3BBV0 1214 aa6.72□□□□□ -1.33
CMC1-211ENST00000495428 EFHC2Q5JST6 749 aa6.72□□□□□ -1.33
CMC1-211ENST00000495428 CFAP70Q5T0N1 1121 aa6.72□□□□□ -1.33
CMC1-211ENST00000495428 LARP1Q6PKG0 1096 aaKnown RBP6.72□□□□□ -1.33
CMC1-211ENST00000495428 TNS4Q8IZW8 715 aa6.72□□□□□ -1.33
CMC1-211ENST00000495428 TMEM151AQ8N4L1 468 aa6.72□□□□□ -1.33
CMC1-211ENST00000495428 CABP1Q9NZU7 370 aa6.72□□□□□ -1.33
CMC1-211ENST00000495428 GPR25O00155 361 aa6.71□□□□□ -1.34
CMC1-211ENST00000495428 THBS1P07996 1170 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms