RNA–Protein interactions for RNA: ENST00000495298.1

GTF3C2-213, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 2

Gene GTF3C2, Length 1,064 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-213ENST00000495298 SLC4A9Q96Q91 983 aa13.16□□□□□ -0.3
GTF3C2-213ENST00000495298 ATG3Q9NT62 314 aa13.16□□□□□ -0.3
GTF3C2-213ENST00000495298 C4AP0C0L4 1744 aa13.16□□□□□ -0.3
GTF3C2-213ENST00000495298 COL5A3P25940 1745 aaPredicted RBP13.16□□□□□ -0.3
GTF3C2-213ENST00000495298 MYH14Q7Z406 1995 aaKnown RBP13.15□□□□□ -0.3
GTF3C2-213ENST00000495298 PHKG2P15735 406 aa13.15□□□□□ -0.3
GTF3C2-213ENST00000495298 ATP6V1AP38606 617 aa13.15□□□□□ -0.3
GTF3C2-213ENST00000495298 TMOD3Q9NYL9 352 aa13.15□□□□□ -0.3
GTF3C2-213ENST00000495298 C10orf71Q711Q0 1435 aa13.14□□□□□ -0.31
GTF3C2-213ENST00000495298 SPG7Q9UQ90 795 aa13.14□□□□□ -0.31
GTF3C2-213ENST00000495298 WASHC2AQ641Q2 1341 aa13.13□□□□□ -0.31
GTF3C2-213ENST00000495298 A0A0G2JLW4 131 aa13.13□□□□□ -0.31
GTF3C2-213ENST00000495298 SLC24A1O60721 1099 aa13.12□□□□□ -0.31
GTF3C2-213ENST00000495298 POLKQ9UBT6 870 aa13.12□□□□□ -0.31
GTF3C2-213ENST00000495298 BCS1LQ9Y276 419 aa13.12□□□□□ -0.31
GTF3C2-213ENST00000495298 ZNF831Q5JPB2 1677 aa13.12□□□□□ -0.31
GTF3C2-213ENST00000495298 DPEP1P16444 411 aa13.11□□□□□ -0.31
GTF3C2-213ENST00000495298 EIF4A2Q14240 407 aaKnown RBP13.11□□□□□ -0.31
GTF3C2-213ENST00000495298 IFNL2Q8IZJ0 200 aa13.11□□□□□ -0.31
GTF3C2-213ENST00000495298 NMRK2Q9NPI5 230 aa13.11□□□□□ -0.31
GTF3C2-213ENST00000495298 KDM6AO15550 1401 aaPredicted RBP13.11□□□□□ -0.31
GTF3C2-213ENST00000495298 PCNTO95613 3336 aa13.1□□□□□ -0.31
GTF3C2-213ENST00000495298 DNAJC5GQ8N7S2 189 aa13.1□□□□□ -0.31
GTF3C2-213ENST00000495298 ARHGEF1Q92888 912 aaKnown RBP13.1□□□□□ -0.31
GTF3C2-213ENST00000495298 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.1□□□□□ -0.311e-6■■■□□ 16.8
GTF3C2-213ENST00000495298 ARFGEF1Q9Y6D6 1849 aa13.1□□□□□ -0.31
GTF3C2-213ENST00000495298 WDR90Q96KV7 1748 aa13.1□□□□□ -0.31
GTF3C2-213ENST00000495298 GYS1P13807 737 aa13.09□□□□□ -0.31
GTF3C2-213ENST00000495298 HMGB2P26583 209 aaKnown RBP13.09□□□□□ -0.31
GTF3C2-213ENST00000495298 TNNT2P45379 298 aaPredicted RBP13.09□□□□□ -0.31
GTF3C2-213ENST00000495298 HTRA3P83110 453 aa13.09□□□□□ -0.31
GTF3C2-213ENST00000495298 TJP1Q07157 1748 aa13.08□□□□□ -0.32
GTF3C2-213ENST00000495298 KCNA3P22001 575 aa13.08□□□□□ -0.32
GTF3C2-213ENST00000495298 TRAPPC3LQ5T215 181 aa13.08□□□□□ -0.32
GTF3C2-213ENST00000495298 ARHGAP27Q6ZUM4 889 aa13.08□□□□□ -0.32
GTF3C2-213ENST00000495298 RBM42Q9BTD8 480 aaKnown RBP13.08□□□□□ -0.32
GTF3C2-213ENST00000495298 RTCBQ9Y3I0 505 aaKnown RBP13.08□□□□□ -0.32
GTF3C2-213ENST00000495298 TOMM70O94826 608 aa13.07□□□□□ -0.32
GTF3C2-213ENST00000495298 APLP1P51693 650 aa13.07□□□□□ -0.32
GTF3C2-213ENST00000495298 TGFB2P61812 414 aa13.07□□□□□ -0.32
GTF3C2-213ENST00000495298 ADAMTS7Q9UKP4 1686 aa13.07□□□□□ -0.32
GTF3C2-213ENST00000495298 CNTNAP4Q9C0A0 1308 aa13.07□□□□□ -0.32
GTF3C2-213ENST00000495298 FCHSD2O94868 740 aa13.06□□□□□ -0.32
GTF3C2-213ENST00000495298 CDCA8Q53HL2 280 aa13.06□□□□□ -0.32
GTF3C2-213ENST00000495298 NLGN1Q8N2Q7 840 aa13.06□□□□□ -0.32
GTF3C2-213ENST00000495298 SRP68Q9UHB9 627 aaKnown RBP13.06□□□□□ -0.32
GTF3C2-213ENST00000495298 KCPQ6ZWJ8 1503 aa13.06□□□□□ -0.32
GTF3C2-213ENST00000495298 SBF1O95248 1867 aa13.06□□□□□ -0.32
GTF3C2-213ENST00000495298 RPS6KA4O75676 772 aa13.05□□□□□ -0.32
GTF3C2-213ENST00000495298 DDR1Q08345 913 aa13.05□□□□□ -0.32
GTF3C2-213ENST00000495298 C9orf131Q5VYM1 1079 aa13.05□□□□□ -0.32
GTF3C2-213ENST00000495298 AEBP1Q8IUX7 1158 aa13.05□□□□□ -0.32
GTF3C2-213ENST00000495298 CCDC87Q9NVE4 849 aa13.05□□□□□ -0.32
GTF3C2-213ENST00000495298 ERVV-2B6SEH9 535 aa13.04□□□□□ -0.32
GTF3C2-213ENST00000495298 RFC4P35249 363 aa13.04□□□□□ -0.32
GTF3C2-213ENST00000495298 FKBP8Q14318 412 aa13.04□□□□□ -0.32
GTF3C2-213ENST00000495298 RC3H1Q5TC82 1133 aaKnown RBP13.04□□□□□ -0.32
GTF3C2-213ENST00000495298 PTCD1O75127 700 aaKnown RBP13.03□□□□□ -0.32
GTF3C2-213ENST00000495298 CHRNA5P30532 468 aa13.03□□□□□ -0.32
GTF3C2-213ENST00000495298 PARP3Q9Y6F1 533 aa13.03□□□□□ -0.32
GTF3C2-213ENST00000495298 CRKLP46109 303 aaKnown RBP13.02□□□□□ -0.33
GTF3C2-213ENST00000495298 ZNF530Q6P9A1 599 aaPredicted RBP13.02□□□□□ -0.33
GTF3C2-213ENST00000495298 DCAF5Q96JK2 942 aa13.02□□□□□ -0.33
GTF3C2-213ENST00000495298 POLR3GLQ9BT43 218 aa13.02□□□□□ -0.33
GTF3C2-213ENST00000495298 PLEKHG2Q9H7P9 1386 aa13.02□□□□□ -0.33
GTF3C2-213ENST00000495298 SCN11AQ9UI33 1791 aa13.02□□□□□ -0.33
GTF3C2-213ENST00000495298 AFDNP55196 1824 aaKnown RBP13.02□□□□□ -0.33
GTF3C2-213ENST00000495298 USP42Q9H9J4 1324 aaKnown RBP13.01□□□□□ -0.33
GTF3C2-213ENST00000495298 VIRMAQ69YN4 1812 aaKnown RBP13□□□□□ -0.33
GTF3C2-213ENST00000495298 TNRC6CQ9HCJ0 1690 aaKnown RBP13□□□□□ -0.33
GTF3C2-213ENST00000495298 CABP4P57796 275 aa13□□□□□ -0.33
GTF3C2-213ENST00000495298 NFATC2IPQ8NCF5 419 aa13□□□□□ -0.33
GTF3C2-213ENST00000495298 RBM46Q8TBY0 533 aaKnown RBP13□□□□□ -0.33
GTF3C2-213ENST00000495298 PIM2Q9P1W9 311 aa13□□□□□ -0.33
GTF3C2-213ENST00000495298 POLRMTO00411 1230 aaKnown RBP12.99□□□□□ -0.33
GTF3C2-213ENST00000495298 PRELPP51888 382 aa12.99□□□□□ -0.33
GTF3C2-213ENST00000495298 RASSF7Q02833 373 aa12.99□□□□□ -0.33
GTF3C2-213ENST00000495298 PLEKHO1Q53GL0 409 aaPredicted RBP12.99□□□□□ -0.33
GTF3C2-213ENST00000495298 COL13A1Q5TAT6 717 aaPredicted RBP12.99□□□□□ -0.33
GTF3C2-213ENST00000495298 INTS5Q6P9B9 1019 aaKnown RBP12.99□□□□□ -0.33
GTF3C2-213ENST00000495298 RNF181Q9P0P0 153 aa12.99□□□□□ -0.33
GTF3C2-213ENST00000495298 HSP90AB1P08238 724 aaKnown RBP12.98□□□□□ -0.33
GTF3C2-213ENST00000495298 MTHFSP49914 203 aa12.98□□□□□ -0.33
GTF3C2-213ENST00000495298 DALRD3Q5D0E6 543 aaKnown RBP12.98□□□□□ -0.33
GTF3C2-213ENST00000495298 KLRG1Q96E93 195 aa12.98□□□□□ -0.33
GTF3C2-213ENST00000495298 RRAGCQ9HB90 399 aa12.98□□□□□ -0.33
GTF3C2-213ENST00000495298 DLEC1Q9Y238 1755 aa12.98□□□□□ -0.33
GTF3C2-213ENST00000495298 NRXN2Q9P2S2 1712 aa12.98□□□□□ -0.33
GTF3C2-213ENST00000495298 CCDC88AQ3V6T2 1871 aa12.97□□□□□ -0.33
GTF3C2-213ENST00000495298 TM4SF1P30408 202 aa12.97□□□□□ -0.33
GTF3C2-213ENST00000495298 DNAJC10Q8IXB1 793 aa12.97□□□□□ -0.33
GTF3C2-213ENST00000495298 JMYQ8N9B5 988 aa12.97□□□□□ -0.33
GTF3C2-213ENST00000495298 TIAM2Q8IVF5 1701 aa12.96□□□□□ -0.33
GTF3C2-213ENST00000495298 AMOTQ4VCS5 1084 aa12.96□□□□□ -0.33
GTF3C2-213ENST00000495298 USPL1Q5W0Q7 1092 aa12.96□□□□□ -0.33
GTF3C2-213ENST00000495298 SULT6B1Q6IMI4 303 aa12.96□□□□□ -0.33
GTF3C2-213ENST00000495298 PANK3Q9H999 370 aa12.96□□□□□ -0.33
GTF3C2-213ENST00000495298 CARMIL3Q8ND23 1372 aa12.95□□□□□ -0.34
GTF3C2-213ENST00000495298 SOS1Q07889 1333 aaPredicted RBP12.95□□□□□ -0.34
GTF3C2-213ENST00000495298 FSTL1Q12841 308 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms