RNA–Protein interactions for RNA: ENST00000495040.1

PLXNA3-208, Transcript of plexin A3, humanhuman

TSL 5

Gene PLXNA3, Length 421 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA3-208ENST00000495040 DIAPH1O60610 1272 aaKnown RBP36.04■■■■□ 3.36
PLXNA3-208ENST00000495040 CABP4P57796 275 aa36.04■■■■□ 3.36
PLXNA3-208ENST00000495040 LINC00116Q8NCU8 138 aa36.04■■■■□ 3.36
PLXNA3-208ENST00000495040 YY1P25490 414 aa36.02■■■■□ 3.36
PLXNA3-208ENST00000495040 ITPK1Q13572 414 aa36.02■■■■□ 3.36
PLXNA3-208ENST00000495040 KLHL34Q8N239 644 aa36.02■■■■□ 3.36
PLXNA3-208ENST00000495040 CNGB1Q14028 1251 aaPredicted RBP36.01■■■■□ 3.36
PLXNA3-208ENST00000495040 HMOX1P09601 288 aa35.99■■■■□ 3.35
PLXNA3-208ENST00000495040 SSFA2P28290 1259 aa35.99■■■■□ 3.35
PLXNA3-208ENST00000495040 MSL1Q68DK7 614 aa35.99■■■■□ 3.35
PLXNA3-208ENST00000495040 ZNF831Q5JPB2 1677 aa35.98■■■■□ 3.35
PLXNA3-208ENST00000495040 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP35.98■■■■□ 3.35
PLXNA3-208ENST00000495040 PHF14O94880 888 aa35.98■■■■□ 3.35
PLXNA3-208ENST00000495040 AKAP4Q5JQC9 854 aa35.98■■■■□ 3.35
PLXNA3-208ENST00000495040 AMIGO3Q86WK7 504 aa35.98■■■■□ 3.35
PLXNA3-208ENST00000495040 RBM42Q9BTD8 480 aaKnown RBP35.97■■■■□ 3.35
PLXNA3-208ENST00000495040 SCN11AQ9UI33 1791 aa35.97■■■■□ 3.35
PLXNA3-208ENST00000495040 NFATC2IPQ8NCF5 419 aa35.95■■■■□ 3.35
PLXNA3-208ENST00000495040 GNPATO15228 680 aa35.94■■■■□ 3.34
PLXNA3-208ENST00000495040 SLC4A9Q96Q91 983 aa35.93■■■■□ 3.34
PLXNA3-208ENST00000495040 COL3A1P02461 1466 aaPredicted RBP35.92■■■■□ 3.34
PLXNA3-208ENST00000495040 SMIM5Q71RC9 77 aa35.92■■■■□ 3.34
PLXNA3-208ENST00000495040 COL5A3P25940 1745 aaPredicted RBP35.88■■■■□ 3.33
PLXNA3-208ENST00000495040 GPR162Q16538 588 aa35.87■■■■□ 3.33
PLXNA3-208ENST00000495040 MTHFSDQ2M296 383 aaKnown RBP35.87■■■■□ 3.33
PLXNA3-208ENST00000495040 RC3H1Q5TC82 1133 aaKnown RBP35.87■■■■□ 3.33
PLXNA3-208ENST00000495040 NLGN2Q8NFZ4 835 aa35.87■■■■□ 3.33
PLXNA3-208ENST00000495040 UTRNP46939 3433 aa35.86■■■■□ 3.33
PLXNA3-208ENST00000495040 VIRMAQ69YN4 1812 aaKnown RBP35.86■■■■□ 3.33
PLXNA3-208ENST00000495040 U2SURPO15042 1029 aaKnown RBP35.86■■■■□ 3.33
PLXNA3-208ENST00000495040 RTCBQ9Y3I0 505 aaKnown RBP35.86■■■■□ 3.33
PLXNA3-208ENST00000495040 CHD4Q14839 1912 aa35.86■■■■□ 3.33
PLXNA3-208ENST00000495040 CNTNAP4Q9C0A0 1308 aa35.85■■■■□ 3.33
PLXNA3-208ENST00000495040 PTCD1O75127 700 aaKnown RBP35.85■■■■□ 3.33
PLXNA3-208ENST00000495040 SLC52A2Q9HAB3 445 aa35.85■■■■□ 3.33
PLXNA3-208ENST00000495040 LGR6Q9HBX8 967 aa35.85■■■■□ 3.33
PLXNA3-208ENST00000495040 RNMTO43148 476 aaKnown RBP35.84■■■■□ 3.33
PLXNA3-208ENST00000495040 TRAPPC3LQ5T215 181 aa35.83■■■■□ 3.33
PLXNA3-208ENST00000495040 CFAP53Q96M91 514 aa35.83■■■■□ 3.33
PLXNA3-208ENST00000495040 CD2APQ9Y5K6 639 aa35.83■■■■□ 3.33
PLXNA3-208ENST00000495040 MRC1P22897 1456 aa35.81■■■■□ 3.32
PLXNA3-208ENST00000495040 ADRA2BP18089 450 aa35.8■■■■□ 3.32
PLXNA3-208ENST00000495040 PELP1Q8IZL8 1130 aaKnown RBP35.8■■■■□ 3.32
PLXNA3-208ENST00000495040 MYH14Q7Z406 1995 aaKnown RBP35.8■■■■□ 3.32
PLXNA3-208ENST00000495040 ADAMTS7Q9UKP4 1686 aa35.79■■■■□ 3.32
PLXNA3-208ENST00000495040 RPS6KA4O75676 772 aa35.79■■■■□ 3.32
PLXNA3-208ENST00000495040 CICQ96RK0 1608 aaPredicted RBP35.77■■■■□ 3.32
PLXNA3-208ENST00000495040 PPP2R1AP30153 589 aa35.76■■■■□ 3.32
PLXNA3-208ENST00000495040 ARHGEF1Q92888 912 aaKnown RBP35.76■■■■□ 3.32
PLXNA3-208ENST00000495040 GAS2L2Q8NHY3 880 aa35.75■■■■□ 3.31
PLXNA3-208ENST00000495040 TJP1Q07157 1748 aa35.74■■■■□ 3.31
PLXNA3-208ENST00000495040 NUDCQ9Y266 331 aa35.74■■■■□ 3.31
PLXNA3-208ENST00000495040 CRKLP46109 303 aaKnown RBP35.73■■■■□ 3.31
PLXNA3-208ENST00000495040 RFC4P35249 363 aa35.72■■■■□ 3.31
PLXNA3-208ENST00000495040 NLGN1Q8N2Q7 840 aa35.72■■■■□ 3.31
PLXNA3-208ENST00000495040 GNAT3A8MTJ3 354 aa35.7■■■■□ 3.31
PLXNA3-208ENST00000495040 SLC39A6Q13433 755 aa35.7■■■■□ 3.31
PLXNA3-208ENST00000495040 GOLGB1Q14789 3259 aaKnown RBP35.7■■■■□ 3.31
PLXNA3-208ENST00000495040 GRIN3BO60391 1043 aa35.69■■■■□ 3.3
PLXNA3-208ENST00000495040 MMP10P09238 476 aa35.69■■■■□ 3.3
PLXNA3-208ENST00000495040 C4AP0C0L4 1744 aa35.67■■■■□ 3.3
PLXNA3-208ENST00000495040 YBX3P16989 372 aaKnown RBP eCLIP35.67■■■■□ 3.3
PLXNA3-208ENST00000495040 DNAJC10Q8IXB1 793 aa35.67■■■■□ 3.3
PLXNA3-208ENST00000495040 RSPH6AQ9H0K4 717 aa35.67■■■■□ 3.3
PLXNA3-208ENST00000495040 GYS1P13807 737 aa35.66■■■■□ 3.3
PLXNA3-208ENST00000495040 PRKAR2BP31323 418 aa35.66■■■■□ 3.3
PLXNA3-208ENST00000495040 KCPQ6ZWJ8 1503 aa35.65■■■■□ 3.3
PLXNA3-208ENST00000495040 TEFQ10587 303 aa35.64■■■■□ 3.3
PLXNA3-208ENST00000495040 INTS5Q6P9B9 1019 aaKnown RBP35.64■■■■□ 3.3
PLXNA3-208ENST00000495040 IL17REQ8NFR9 667 aa35.64■■■■□ 3.3
PLXNA3-208ENST00000495040 U2AF1L5P0DN76 240 aaPredicted RBP35.63■■■■□ 3.29
PLXNA3-208ENST00000495040 U2AF1Q01081 240 aaKnown RBP eCLIP35.63■■■■□ 3.29
PLXNA3-208ENST00000495040 VSIG10Q8N0Z9 540 aa35.63■■■■□ 3.29
PLXNA3-208ENST00000495040 ZNF784Q8NCA9 323 aaPredicted RBP35.63■■■■□ 3.29
PLXNA3-208ENST00000495040 PHACTR3Q96KR7 559 aa35.63■■■■□ 3.29
PLXNA3-208ENST00000495040 CCDC87Q9NVE4 849 aa35.63■■■■□ 3.29
PLXNA3-208ENST00000495040 UBR2Q8IWV8 1755 aa35.61■■■■□ 3.29
PLXNA3-208ENST00000495040 TTC5Q8N0Z6 440 aa35.61■■■■□ 3.29
PLXNA3-208ENST00000495040 CYP19A1P11511 503 aaPredicted RBP35.6■■■■□ 3.29
PLXNA3-208ENST00000495040 FCHSD2O94868 740 aa35.59■■■■□ 3.29
PLXNA3-208ENST00000495040 USP42Q9H9J4 1324 aaKnown RBP35.58■■■■□ 3.29
PLXNA3-208ENST00000495040 KIF13BQ9NQT8 1826 aa35.58■■■■□ 3.29
PLXNA3-208ENST00000495040 SIPA1L3O60292 1781 aaPredicted RBP35.58■■■■□ 3.29
PLXNA3-208ENST00000495040 PARP3Q9Y6F1 533 aa35.57■■■■□ 3.28
PLXNA3-208ENST00000495040 CEMIPQ8WUJ3 1361 aa35.56■■■■□ 3.28
PLXNA3-208ENST00000495040 SRP68Q9UHB9 627 aaKnown RBP35.56■■■■□ 3.28
PLXNA3-208ENST00000495040 SOS1Q07889 1333 aaPredicted RBP35.55■■■■□ 3.28
PLXNA3-208ENST00000495040 ZNF790Q6PG37 636 aa35.54■■■■□ 3.28
PLXNA3-208ENST00000495040 C10orf71Q711Q0 1435 aa35.52■■■■□ 3.28
PLXNA3-208ENST00000495040 ZPR1O75312 459 aa35.52■■■■□ 3.28
PLXNA3-208ENST00000495040 TGFB2P61812 414 aa35.52■■■■□ 3.28
PLXNA3-208ENST00000495040 STARD3NLO95772 234 aa35.51■■■■□ 3.28
PLXNA3-208ENST00000495040 FKBP8Q14318 412 aa35.51■■■■□ 3.28
PLXNA3-208ENST00000495040 ZNF496Q96IT1 587 aaPredicted RBP35.51■■■■□ 3.28
PLXNA3-208ENST00000495040 ZBTB1Q9Y2K1 713 aa35.51■■■■□ 3.28
PLXNA3-208ENST00000495040 RTF1Q92541 710 aaKnown RBP35.49■■■■□ 3.27
PLXNA3-208ENST00000495040 TEX13AQ9BXU3 409 aaPredicted RBP35.49■■■■□ 3.27
PLXNA3-208ENST00000495040 HEG1Q9ULI3 1381 aa35.49■■■■□ 3.27
PLXNA3-208ENST00000495040 PXDNLA1KZ92 1463 aa35.48■■■■□ 3.27
PLXNA3-208ENST00000495040 WWC3Q9ULE0 1092 aa35.48■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms